Path	Lines of Code
e2e/cli/cli-tests.gradle	66
e2e/integration_tests.sh	21
server/catgenome/src/test/java/com/epam/catgenome/FileManagerTest.java	80
server/catgenome/src/test/java/com/epam/catgenome/GenomeBrowserTestSuite.java	15
server/catgenome/src/test/java/com/epam/catgenome/app/JwtAuthenticationTest.java	85
server/catgenome/src/test/java/com/epam/catgenome/common/AbstractACLSecurityTest.java	19
server/catgenome/src/test/java/com/epam/catgenome/common/AbstractControllerTest.java	55
server/catgenome/src/test/java/com/epam/catgenome/common/AbstractJUnitTest.java	63
server/catgenome/src/test/java/com/epam/catgenome/common/AbstractManagerTest.java	16
server/catgenome/src/test/java/com/epam/catgenome/common/AbstractSecurityTest.java	16
server/catgenome/src/test/java/com/epam/catgenome/common/ResponseResult.java	24
server/catgenome/src/test/java/com/epam/catgenome/common/security/WithMockUserContext.java	12
server/catgenome/src/test/java/com/epam/catgenome/common/security/WithMockUserContextSecurityContextFactory.java	27
server/catgenome/src/test/java/com/epam/catgenome/controller/BamControllerTest.java	244
server/catgenome/src/test/java/com/epam/catgenome/controller/BedControllerTest.java	106
server/catgenome/src/test/java/com/epam/catgenome/controller/BookmarksControllerTest.java	195
server/catgenome/src/test/java/com/epam/catgenome/controller/CytobandControllerTest.java	87
server/catgenome/src/test/java/com/epam/catgenome/controller/ExternalDBControllerTest.java	102
server/catgenome/src/test/java/com/epam/catgenome/controller/FilterControllerTest.java	207
server/catgenome/src/test/java/com/epam/catgenome/controller/GeneControllerTest.java	259
server/catgenome/src/test/java/com/epam/catgenome/controller/ProjectControllerTest.java	728
server/catgenome/src/test/java/com/epam/catgenome/controller/ReferenceControllerTest.java	429
server/catgenome/src/test/java/com/epam/catgenome/controller/ToolsControllerTest.java	88
server/catgenome/src/test/java/com/epam/catgenome/controller/VcfControllerTest.java	273
server/catgenome/src/test/java/com/epam/catgenome/controller/WigControllerTest.java	125
server/catgenome/src/test/java/com/epam/catgenome/controller/util/MultipartFileSender.java	263
server/catgenome/src/test/java/com/epam/catgenome/controller/util/ResultReference.java	31
server/catgenome/src/test/java/com/epam/catgenome/controller/util/UrlTestingUtils.java	40
server/catgenome/src/test/java/com/epam/catgenome/dao/AbstractDaoTest.java	48
server/catgenome/src/test/java/com/epam/catgenome/dao/BamFileDaoTest.java	75
server/catgenome/src/test/java/com/epam/catgenome/dao/BiologicalDataItemDaoTest.java	219
server/catgenome/src/test/java/com/epam/catgenome/dao/BlastTaskDaoTest.java	168
server/catgenome/src/test/java/com/epam/catgenome/dao/BookmarkDaoTest.java	239
server/catgenome/src/test/java/com/epam/catgenome/dao/BucketDaoTest.java	55
server/catgenome/src/test/java/com/epam/catgenome/dao/DaoHelperTest.java	39
server/catgenome/src/test/java/com/epam/catgenome/dao/GeneDaoTest.java	82
server/catgenome/src/test/java/com/epam/catgenome/dao/MafFileDaoTest.java	65
server/catgenome/src/test/java/com/epam/catgenome/dao/PersonDaoTest.java	58
server/catgenome/src/test/java/com/epam/catgenome/dao/ProjectDaoTest.java	90
server/catgenome/src/test/java/com/epam/catgenome/dao/ReferenceGenomeDaoTest.java	201
server/catgenome/src/test/java/com/epam/catgenome/dao/SegDaoTest.java	102
server/catgenome/src/test/java/com/epam/catgenome/dao/SpeciesDaoTest.java	44
server/catgenome/src/test/java/com/epam/catgenome/dao/UrlShorterDaoTest.java	48
server/catgenome/src/test/java/com/epam/catgenome/dao/VcfFileDaoTest.java	93
server/catgenome/src/test/java/com/epam/catgenome/dao/WigFileDaoTest.java	54
server/catgenome/src/test/java/com/epam/catgenome/dao/activity/ActivityDaoTest.java	81
server/catgenome/src/test/java/com/epam/catgenome/dao/metadata/MetadataDaoTest.java	86
server/catgenome/src/test/java/com/epam/catgenome/dao/project/ProjectDescriptionDaoTest.java	138
server/catgenome/src/test/java/com/epam/catgenome/dao/user/RoleDaoTest.java	83
server/catgenome/src/test/java/com/epam/catgenome/dao/user/UserDaoTest.java	170
server/catgenome/src/test/java/com/epam/catgenome/helper/EntityHelper.java	150
server/catgenome/src/test/java/com/epam/catgenome/helper/FileTemplates.java	13
server/catgenome/src/test/java/com/epam/catgenome/manager/AuthManagerTest.java	51
server/catgenome/src/test/java/com/epam/catgenome/manager/BiologicalDataItemManagerTest.java	147
server/catgenome/src/test/java/com/epam/catgenome/manager/BookmarkManagerTest.java	123
server/catgenome/src/test/java/com/epam/catgenome/manager/CytobandManagerTest.java	76
server/catgenome/src/test/java/com/epam/catgenome/manager/FeatureIndexManagerTest.java	1347
server/catgenome/src/test/java/com/epam/catgenome/manager/GffManagerTest.java	737
server/catgenome/src/test/java/com/epam/catgenome/manager/PersonManagerTest.java	40
server/catgenome/src/test/java/com/epam/catgenome/manager/UpdateFilePathManagerTest.java	191
server/catgenome/src/test/java/com/epam/catgenome/manager/UrlShorterManagerTest.java	46
server/catgenome/src/test/java/com/epam/catgenome/manager/aws/S3ManagerTest.java	27
server/catgenome/src/test/java/com/epam/catgenome/manager/bam/BamCoverageManagerTest.java	119
server/catgenome/src/test/java/com/epam/catgenome/manager/bam/BamManagerTest.java	601
server/catgenome/src/test/java/com/epam/catgenome/manager/bam/BamSecurityServiceTest.java	75
server/catgenome/src/test/java/com/epam/catgenome/manager/bam/BlatSearchManagerTest.java	129
server/catgenome/src/test/java/com/epam/catgenome/manager/bam/ConstantMemorySAMRecordSamplerTest.java	34
server/catgenome/src/test/java/com/epam/catgenome/manager/bam/ResponseEmitterMock.java	36
server/catgenome/src/test/java/com/epam/catgenome/manager/bam/SamRecordHandlerTest.java	84
server/catgenome/src/test/java/com/epam/catgenome/manager/bed/BedManagerTest.java	376
server/catgenome/src/test/java/com/epam/catgenome/manager/bucket/BucketManagerTest.java	40
server/catgenome/src/test/java/com/epam/catgenome/manager/dataitem/DataItemManagerTest.java	93
server/catgenome/src/test/java/com/epam/catgenome/manager/dataitem/DataItemSecurityServiceTest.java	95
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/EnsemblDataManagerTest.java	97
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/HomologeneManagerTest.java	43
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/NCBIAuxiliaryManagerTest.java	90
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/NCBIGeneManagerTest.java	102
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/NCBIShortVarManagerTest.java	179
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/PdbDataManagerTest.java	63
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/TaxonomyManagerTest.java	62
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/UniprotDataManagerTest.java	96
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/bindings/ExternalDBBindingTest.java	105
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/dgidb/DGIDBDrugAssociationManagerTest.java	51
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/ncbi/NCBIEnsemblIdsManagerTest.java	41
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/opentarget/DiseaseAssociationManagerTest.java	70
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/opentarget/DiseaseManagerTest.java	43
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/opentarget/DrugAssociationManagerTest.java	49
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/opentarget/TargetDetailsManagerTest.java	35
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/pharmgkb/PharmGKBDiseaseAssociationManagerTest.java	52
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/pharmgkb/PharmGKBDrugAssociationManagerTest.java	56
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/pharmgkb/PharmGKBDrugManagerTest.java	34
server/catgenome/src/test/java/com/epam/catgenome/manager/externaldb/pharmgkb/PharmGKBGeneManagerTest.java	34
server/catgenome/src/test/java/com/epam/catgenome/manager/gene/GeneActivityServiceTest.java	147
server/catgenome/src/test/java/com/epam/catgenome/manager/gene/GffManagerInvalidFilesTest.java	71
server/catgenome/src/test/java/com/epam/catgenome/manager/gene/GffManagerUnitTest.java	98
server/catgenome/src/test/java/com/epam/catgenome/manager/genepred/GenePredManagerTest.java	38
server/catgenome/src/test/java/com/epam/catgenome/manager/heatmap/HeatmapManagerTest.java	145
server/catgenome/src/test/java/com/epam/catgenome/manager/lineage/LineageManagerTest.java	130
server/catgenome/src/test/java/com/epam/catgenome/manager/maf/MafManagerTest.java	171
server/catgenome/src/test/java/com/epam/catgenome/manager/pathway/PathwayManagerTest.java	117
server/catgenome/src/test/java/com/epam/catgenome/manager/pdb/PdbFileManagerTest.java	84
server/catgenome/src/test/java/com/epam/catgenome/manager/project/ProjectManagerTest.java	564
server/catgenome/src/test/java/com/epam/catgenome/manager/project/ProjectSecurityServiceTest.java	157
server/catgenome/src/test/java/com/epam/catgenome/manager/protein/ProteinSequenceManagerIntegrationTest.java	177
server/catgenome/src/test/java/com/epam/catgenome/manager/protein/ProteinSequenceReconstructionManagerUnitTest.java	157
server/catgenome/src/test/java/com/epam/catgenome/manager/reference/MotifSearchManagerTest.java	661
server/catgenome/src/test/java/com/epam/catgenome/manager/reference/MotifSearchManagerValidationTest.java	161
server/catgenome/src/test/java/com/epam/catgenome/manager/reference/ReferenceGenomeManagerTest.java	239
server/catgenome/src/test/java/com/epam/catgenome/manager/reference/ReferenceManagerTest.java	343
server/catgenome/src/test/java/com/epam/catgenome/manager/reference/io/ChromosomeReferenceSequenceTest.java	104
server/catgenome/src/test/java/com/epam/catgenome/manager/seg/SegManagerTest.java	128
server/catgenome/src/test/java/com/epam/catgenome/manager/session/NGBSessionManagerTest.java	122
server/catgenome/src/test/java/com/epam/catgenome/manager/tools/SortTest.java	106
server/catgenome/src/test/java/com/epam/catgenome/manager/user/UserSecurityServiceTest.java	41
server/catgenome/src/test/java/com/epam/catgenome/manager/vcf/VcfManagerTest.java	695
server/catgenome/src/test/java/com/epam/catgenome/manager/wig/BedGraphProcessorTest.java	154
server/catgenome/src/test/java/com/epam/catgenome/manager/wig/WigProcessorTest.java	134
server/catgenome/src/test/java/com/epam/catgenome/security/acl/AclPermissionSecurityServiceTest.java	110
server/catgenome/src/test/java/com/epam/catgenome/security/acl/NGBSessionSharingSecurityTest.java	182
server/catgenome/src/test/java/com/epam/catgenome/util/AclTestDao.java	355
server/catgenome/src/test/java/com/epam/catgenome/util/BlockCompressedDataStreamsTest.java	68
server/catgenome/src/test/java/com/epam/catgenome/util/CachedFeatureReader.java	70
server/catgenome/src/test/java/com/epam/catgenome/util/ConsensusSequenceUtilsTest.java	72
server/catgenome/src/test/java/com/epam/catgenome/util/DiskBasedListTest.java	88
server/catgenome/src/test/java/com/epam/catgenome/util/EhCacheDisabledIndexCacheTest.java	27
server/catgenome/src/test/java/com/epam/catgenome/util/EhCacheTest.java	112
server/catgenome/src/test/java/com/epam/catgenome/util/IndexHeaderCacheTest.java	70
server/catgenome/src/test/java/com/epam/catgenome/util/InfoFieldParserTest.java	67
server/catgenome/src/test/java/com/epam/catgenome/util/MotifSearcherTest.java	246
server/catgenome/src/test/java/com/epam/catgenome/util/NGBRegistrationUtils.java	104
server/catgenome/src/test/java/com/epam/catgenome/util/NgbFileUtilsTest.java	25
server/catgenome/src/test/java/com/epam/catgenome/util/TabixReaderTest.java	122
server/catgenome/src/test/java/com/epam/catgenome/util/TestAbstractFeatureReader.java	187
server/catgenome/src/test/java/com/epam/catgenome/util/TestUtils.java	77
server/catgenome/src/test/java/com/epam/catgenome/util/azure/ApplicationTest.java	52
server/catgenome/src/test/java/com/epam/catgenome/util/azure/AzureCredentialConfigurationTest.java	17
server/catgenome/src/test/java/com/epam/catgenome/util/azure/CredentialConfigurerTest.java	43
server/catgenome/src/test/java/com/epam/catgenome/vo/Query2TrackConverterTest.java	82
server/catgenome/src/test/resources/applicationContext-test.xml	31
server/catgenome/src/test/resources/blat/data/testResponse.html	161
server/catgenome/src/test/resources/catgenome-servlet-test.xml	24
server/catgenome/src/test/resources/conf/catgenome/acl-test-dao.xml	126
server/catgenome/src/test/resources/database/test/h2/v2016.11.21_17.59__Create_Test_Sequence.sql	3
server/catgenome/src/test/resources/database/test/postgres/v2016.11.21_17.59__Create_Test_Sequence.sql	3
server/catgenome/src/test/resources/externaldb/data/ncbi_link_gene_biosystems_3985.xml	16
server/catgenome/src/test/resources/externaldb/data/ncbi_link_gene_homologene_3985.xml	16
server/catgenome/src/test/resources/externaldb/data/ncbi_link_gene_pubmed_3985.xml	16
server/catgenome/src/test/resources/externaldb/data/ncbi_search_snp_variations_on_region.xml	1
server/catgenome/src/test/resources/externaldb/data/pbd_map_id_2k8d.xml	63
server/catgenome/src/test/resources/homologene/homologene.xml	7813
server/catgenome/src/test/resources/log4j.xml	28
server/ngb-cli/src/test/java/com/epam/ngb/cli/AbstractCliTest.java	109
server/ngb-cli/src/test/java/com/epam/ngb/cli/TestDataProvider.java	198
server/ngb-cli/src/test/java/com/epam/ngb/cli/TestHttpServer.java	474
server/ngb-cli/src/test/java/com/epam/ngb/cli/Utils.java	10
server/ngb-cli/src/test/java/com/epam/ngb/cli/app/ApplicationTest.java	31
server/ngb-cli/src/test/java/com/epam/ngb/cli/app/ConfigurationLoaderTest.java	67
server/ngb-cli/src/test/java/com/epam/ngb/cli/entity/BiologicalDataItemTest.java	31
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/CommandManagerTest.java	62
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/CommonHTTPCommandHandlerTest.java	33
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/FileDeletionHandlerTest.java	68
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/FileIndexingHandlerTest.java	69
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/FileRegistrationHandlerTest.java	177
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/SearchHandlerTest.java	122
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/SortHandlerTest.java	61
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/UrlGeneratorHandlerTest.java	68
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/dataset/DatasetDeletionHandlerTest.java	76
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/dataset/DatasetItemAddingHandlerTest.java	89
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/dataset/DatasetItemDeletionHandlerTest.java	79
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/dataset/DatasetListHandlerTest.java	132
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/dataset/DatasetMovingHandlerTest.java	97
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/dataset/DatasetRegistrationHandlerTest.java	143
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/gene/GeneAddingHandlerTest.java	80
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/gene/GeneRemovingHandlerTest.java	74
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/reference/AnnotationReferenceHandlersTest.java	150
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/reference/ReferenceDeletionHandlerTest.java	64
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/reference/ReferenceListHandlerTest.java	77
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/reference/ReferenceRegistrationHandlerTest.java	75
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/species/SpeciesAddingHandlerTest.java	69
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/species/SpeciesDeletionHandlerTest.java	51
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/species/SpeciesListHandlerTest.java	72
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/species/SpeciesRegistrationTest.java	60
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/http/species/SpeciesRemovingHandlerTest.java	64
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/simple/SetPropertyCommandHandlerTest.java	31
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/simple/SetServerCommandHandlerTest.java	20
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/simple/SetTokenCommandHandlerTest.java	26
server/ngb-cli/src/test/java/com/epam/ngb/cli/manager/command/handler/simple/VersionCommandHandlerTest.java	16
server/ngb-cli/src/test/resources/log4j2.xml	12