private static Stream streamOfGA5argumentsNASample()

in src/integrationTest/java/com/epam/fonda/DnaWgsVarBamIntegrationTest.java [128:167]
40 lines of code
1 McCabe index (conditional complexity)

    private static Stream<Arguments> streamOfGA5argumentsNASample() {
        return Stream.of(
            Arguments.of(
                DNA_WGS_VAR_BAM_G_ALL_TASKS_SAMPLE_NA_TXT_GLOBAL_CONFIG_PATH,
                DNA_WGS_VAR_BAM_S_SINGLE_TXT_SAMPLE_STUDY_CONFIG_PATH,
                STRELKA2_TASK_NAME,
                SUFFIX_FOR_GA5_TEST_SHELL_SCRIPT_PATH,
                DNA_WGS_VAR_BAM_STRELKA2_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                DNA_WGS_VAR_BAM_VARIANT_DETECTION_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                TEST_SHELL_SCRIPT_PATH_VARIANT_DETECTION_FOR_GA5
            ),
            Arguments.of(
                DNA_WGS_VAR_BAM_G_ALL_TASKS_SAMPLE_NA_TXT_GLOBAL_CONFIG_PATH,
                DNA_WGS_VAR_BAM_S_SINGLE_TXT_SAMPLE_STUDY_CONFIG_PATH,
                FREEBAYES_TASK_NAME,
                SUFFIX_FOR_GA5_TEST_SHELL_SCRIPT_PATH,
                DNA_WGS_VAR_BAM_FREEBAYES_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                DNA_WGS_VAR_BAM_VARIANT_DETECTION_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                TEST_SHELL_SCRIPT_PATH_VARIANT_DETECTION_FOR_GA5
            ),
            Arguments.of(
                DNA_WGS_VAR_BAM_G_ALL_TASKS_SAMPLE_NA_TXT_GLOBAL_CONFIG_PATH,
                DNA_WGS_VAR_BAM_S_SINGLE_TXT_SAMPLE_STUDY_CONFIG_PATH,
                GATK_HAPLOTYPE_CALLER_TASK_NAME,
                SUFFIX_FOR_GA5_TEST_SHELL_SCRIPT_PATH,
                DNA_WGS_VAR_BAM_GATK_HAPLOTYPE_CALLER_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                DNA_WGS_VAR_BAM_VARIANT_DETECTION_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                TEST_SHELL_SCRIPT_PATH_VARIANT_DETECTION_FOR_GA5
            ),
            Arguments.of(
                DNA_WGS_VAR_BAM_G_ALL_TASKS_SAMPLE_NA_TXT_GLOBAL_CONFIG_PATH,
                DNA_WGS_VAR_BAM_S_SINGLE_TXT_SAMPLE_STUDY_CONFIG_PATH,
                LOFREQ_TASK_NAME,
                SUFFIX_FOR_GA5_TEST_SHELL_SCRIPT_PATH,
                DNA_WGS_VAR_BAM_LOFREQ_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                DNA_WGS_VAR_BAM_VARIANT_DETECTION_FOR_GA5_ANALYSIS_TEMPLATE_PATH,
                TEST_SHELL_SCRIPT_PATH_VARIANT_DETECTION_FOR_GA5
            )
        );
    }