in src/integrationTest/java/com/epam/fonda/HlaTypingFastqIntegrationTest.java [102:137]
private static Stream<Arguments> initParametersPairedTrimmQcXenomeYes() {
return Stream.of(
Arguments.of(
String.format("%s%s%s",
OUTPUT_SH_FILE_SUFFIX, TEMPLATE_OUTPUT_SMV1_SUFFIX, SH_EXTENSION_SUFFIX),
String.format("%s%s%s",
HLA_TYPE_PAIRED_TRIMM_QC_XENOME_YES_SUFFIX,
TEMPLATE_OUTPUT_SMV1_SUFFIX,
TXT_EXTENSION_SUFFIX)
),
Arguments.of(
String.format("%s%s%s",
OUTPUT_SH_FILE_SUFFIX, TEMPLATE_OUTPUT_SMV2_SUFFIX, SH_EXTENSION_SUFFIX),
String.format("%s%s%s",
HLA_TYPE_PAIRED_TRIMM_QC_XENOME_YES_SUFFIX,
TEMPLATE_OUTPUT_SMV2_SUFFIX,
TXT_EXTENSION_SUFFIX)
),
Arguments.of(
String.format("%s%s%s",
OUTPUT_SH_FILE_SUFFIX, TEMPLATE_OUTPUT_SMV3_SUFFIX, SH_EXTENSION_SUFFIX),
String.format("%s%s%s",
HLA_TYPE_PAIRED_TRIMM_QC_XENOME_YES_SUFFIX,
TEMPLATE_OUTPUT_SMV3_SUFFIX,
TXT_EXTENSION_SUFFIX)
),
Arguments.of(
String.format("%s%s%s",
OUTPUT_SH_FILE_SUFFIX, TEMPLATE_OUTPUT_SMV5_SUFFIX, SH_EXTENSION_SUFFIX),
String.format("%s%s%s",
HLA_TYPE_PAIRED_TRIMM_QC_XENOME_YES_SUFFIX,
TEMPLATE_OUTPUT_SMV5_SUFFIX,
TXT_EXTENSION_SUFFIX)
)
);
}