private Set filterToolset()

in src/main/java/com/epam/fonda/tools/impl/DnaAnalysis.java [179:203]

• 25 lines of code
• 8 McCabe index (conditional complexity)

    private Set<String> filterToolset(Flag flag) {
        final Set<String> toolset = new HashSet<>();
        if (flag.isVardict()) {
            toolset.add(VARDICT);
        }
        if (flag.isMutect1()) {
            toolset.add(MUTECT1);
        }
        if (flag.isMutect2()) {
            toolset.add(MUTECT2);
        }
        if (flag.isLofreq()) {
            toolset.add(LOFREQ);
        }
        if (flag.isGatkHaplotypeCaller()) {
            toolset.add(GATK_HAPLOTYPE_CALLER);
        }
        if (flag.isStrelka2()) {
            toolset.add(STRELKA2);
        }
        if (flag.isScalpel()) {
            toolset.add(SCALPEL);
        }
        return toolset;
    }