public void addScript()

in src/main/java/com/epam/fonda/entity/configuration/orchestrator/MasterScript.java [124:150]

• 27 lines of code
• 8 McCabe index (conditional complexity)

    public void addScript(final String sampleName, final ScriptType type, final String script) {
        if (StringUtils.isBlank(script)) {
            return;
        }
        if (!scriptsBySample.containsKey(sampleName)) {
            final Map<ScriptType, List<String>> scriptsByProcess = new HashMap<>();
            scriptsBySample.put(sampleName, scriptsByProcess);
        }
        switch (type) {
            case ALIGNMENT:
                putScript(sampleName, ALIGNMENT, script);
                break;
            case SECONDARY:
                putScript(sampleName, SECONDARY, script);
                break;
            case POST_ALIGNMENT:
                putScript(sampleName, POST_ALIGNMENT, script);
                break;
            case POST_PROCESS:
                postProcessScripts.add(script);
                break;
            case TEMP:
                cleanupTempFiles.add(script);
                break;
            default: throw new IllegalArgumentException(format("Requested %s script type is not allowed", type));
        }
    }