id: 1 unit: _buildBetaSheets() file: packages/miew/src/chem/SecondaryStructureMap.js start line: 203 end line: 442 size: 199 LOC McCabe index: 58 number of parameters: 0 id: 2 unit: void main() file: packages/miew/src/gfx/shaders/Uber.frag start line: 488 end line: 728 size: 186 LOC McCabe index: 24 number of parameters: 0 id: 3 unit: Miew.prototype._initGfx = function() file: packages/miew/src/Miew.js start line: 423 end line: 635 size: 178 LOC McCabe index: 8 number of parameters: 0 id: 4 unit: export default function readCIF() file: packages/miew/src/io/parsers/readCIF.js start line: 23 end line: 256 size: 153 LOC McCabe index: 49 number of parameters: 1 id: 5 unit: setColorVolTex() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 445 end line: 622 size: 136 LOC McCabe index: 18 number of parameters: 4 id: 6 unit: Miew.prototype._initOnSettingsChanged = function() file: packages/miew/src/Miew.js start line: 3666 end line: 3821 size: 133 LOC McCabe index: 19 number of parameters: 0 id: 7 unit: _doGridPosNorms() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 222 end line: 364 size: 130 LOC McCabe index: 15 number of parameters: 3 id: 8 unit: _parseSet() file: packages/miew/src/io/parsers/CMLParser.js start line: 472 end line: 622 size: 126 LOC McCabe index: 29 number of parameters: 1 id: 9 unit: parse: function parse() file: packages/miew/src/utils/SelectionParser.js start line: 140 end line: 283 size: 124 LOC McCabe index: 33 number of parameters: 1 id: 10 unit: _innerBuild() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 721 end line: 862 size: 110 LOC McCabe index: 10 number of parameters: 0 id: 11 unit: createVoxels() file: packages/miew/src/gfx/geometries/IsosurfaceBuildNormals.js start line: 31 end line: 155 size: 109 LOC McCabe index: 27 number of parameters: 0 id: 12 unit: function ObjectControls() file: packages/miew/src/ui/ObjectControls.js start line: 244 end line: 403 size: 98 LOC McCabe index: 3 number of parameters: 5 id: 13 unit: updateSelectionMask() file: packages/miew/src/ComplexVisual.js start line: 370 end line: 467 size: 90 LOC McCabe index: 20 number of parameters: 1 id: 14 unit: Miew.prototype.init = function() file: packages/miew/src/Miew.js start line: 264 end line: 365 size: 90 LOC McCabe index: 12 number of parameters: 0 id: 15 unit: setValues() file: packages/miew/src/gfx/shaders/UberMaterial.js start line: 245 end line: 338 size: 89 LOC McCabe index: 27 number of parameters: 1 id: 16 unit: finalize() file: packages/miew/src/chem/Complex.js start line: 470 end line: 576 size: 84 LOC McCabe index: 22 number of parameters: 1 id: 17 unit: _updateVertices() file: packages/miew/src/gfx/VolumeMesh.js start line: 89 end line: 228 size: 84 LOC McCabe index: 19 number of parameters: 0 id: 18 unit: _extractAtoms() file: packages/miew/src/io/parsers/CIFParser.js start line: 242 end line: 331 size: 80 LOC McCabe index: 38 number of parameters: 2 id: 19 unit: buildGeoFromCorners() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 264 end line: 359 size: 79 LOC McCabe index: 13 number of parameters: 6 id: 20 unit: Miew.prototype._onLoad = function() file: packages/miew/src/Miew.js start line: 2182 end line: 2279 size: 78 LOC McCabe index: 21 number of parameters: 2 id: 21 unit: _buildAlphaHelices() file: packages/miew/src/chem/SecondaryStructureMap.js start line: 71 end line: 157 size: 78 LOC McCabe index: 41 number of parameters: 3 id: 22 unit: function projectTorus() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 454 end line: 548 size: 72 LOC McCabe index: 9 number of parameters: 2 id: 23 unit: function projectPoints() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 335 end line: 440 size: 71 LOC McCabe index: 11 number of parameters: 0 id: 24 unit: Miew.prototype._onKeyDown = function() file: packages/miew/src/Miew.js start line: 2855 end line: 2925 size: 69 LOC McCabe index: 16 number of parameters: 1 id: 25 unit: gaussdensity() file: packages/miew/src/gfx/geometries/QuickSurfGeometry.js start line: 32 end line: 116 size: 69 LOC McCabe index: 10 number of parameters: 4 id: 26 unit: _updateIndices() file: packages/miew/src/gfx/VolumeMesh.js start line: 273 end line: 351 size: 67 LOC McCabe index: 11 number of parameters: 0 id: 27 unit: test_match:function() file: packages/miew/src/utils/SelectionParser.js start line: 424 end line: 493 size: 66 LOC McCabe index: 11 number of parameters: 2 id: 28 unit: _parseSTRUCTURE() file: packages/miew/src/io/parsers/PDBParser.js start line: 312 end line: 382 size: 64 LOC McCabe index: 7 number of parameters: 3 id: 29 unit: function _fetchData() file: packages/miew/src/Miew.js start line: 1857 end line: 1934 size: 62 LOC McCabe index: 13 number of parameters: 3 id: 30 unit: vec4 VolRender() file: packages/miew/src/gfx/shaders/Volume.frag start line: 154 end line: 219 size: 61 LOC McCabe index: 10 number of parameters: 4 id: 31 unit: _extractSGroups() file: packages/miew/src/io/parsers/CMLParser.js start line: 104 end line: 184 size: 59 LOC McCabe index: 11 number of parameters: 2 id: 32 unit: parseBinaryData() file: packages/miew/src/gfx/FrameInfo.js start line: 147 end line: 204 size: 57 LOC McCabe index: 11 number of parameters: 1 id: 33 unit: _extractConfs() file: packages/miew/src/io/parsers/CIFParser.js start line: 417 end line: 478 size: 56 LOC McCabe index: 25 number of parameters: 2 id: 34 unit: buildTiledTexture() file: packages/miew/src/chem/Volume.js start line: 232 end line: 304 size: 56 LOC McCabe index: 10 number of parameters: 0 id: 35 unit: _parseAssemblyInfo() file: packages/miew/src/io/parsers/MMTFParser.js start line: 316 end line: 392 size: 55 LOC McCabe index: 14 number of parameters: 1 id: 36 unit: function prepareComponentCompound() file: packages/miew/src/io/parsers/CMLParser.js start line: 263 end line: 357 size: 55 LOC McCabe index: 15 number of parameters: 1 id: 37 unit: dssp() file: packages/miew/src/chem/Complex.js start line: 863 end line: 927 size: 54 LOC McCabe index: 11 number of parameters: 0 id: 38 unit: def process_file() file: packages/miew/tools/pdbfreq.py start line: 0 end line: 0 size: 53 LOC McCabe index: 27 number of parameters: 1 id: 39 unit: next:function() file: packages/miew/src/utils/SelectionParser.js start line: 496 end line: 551 size: 53 LOC McCabe index: 15 number of parameters: 0 id: 40 unit: Miew.prototype._updateInfoPanel = function() file: packages/miew/src/Miew.js start line: 2937 end line: 3001 size: 53 LOC McCabe index: 12 number of parameters: 0 id: 41 unit: _collectCylindersInfo() file: packages/miew/src/io/exporters/fbx/FBXInfoExtractor.js start line: 210 end line: 266 size: 52 LOC McCabe index: 5 number of parameters: 1 id: 42 unit: begin() file: packages/miew/src/ComplexVisualEdit.js start line: 194 end line: 265 size: 52 LOC McCabe index: 8 number of parameters: 0 id: 43 unit: calculateGridCorners() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 450 end line: 511 size: 52 LOC McCabe index: 10 number of parameters: 6 id: 44 unit: Miew.prototype.getState = function() file: packages/miew/src/Miew.js start line: 3516 end line: 3574 size: 51 LOC McCabe index: 12 number of parameters: 1 id: 45 unit: updateToFrame() file: packages/miew/src/gfx/modes/groups/BondsLinesGroup.js start line: 65 end line: 124 size: 51 LOC McCabe index: 12 number of parameters: 1 id: 46 unit: addVertexToGeo() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 568 end line: 624 size: 51 LOC McCabe index: 11 number of parameters: 2 id: 47 unit: function _parseValue() file: packages/miew/src/io/parsers/readCIF.js start line: 42 end line: 97 size: 50 LOC McCabe index: 17 number of parameters: 0 id: 48 unit: _tryBond() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 156 end line: 206 size: 50 LOC McCabe index: 14 number of parameters: 3 id: 49 unit: _forEachVoxelWithinRadius() file: packages/miew/src/chem/VoxelWorld.js start line: 165 end line: 228 size: 50 LOC McCabe index: 10 number of parameters: 3 id: 50 unit: _build() file: packages/miew/src/gfx/modes/groups/BondsLinesGroup.js start line: 7 end line: 63 size: 50 LOC McCabe index: 11 number of parameters: 0 id: 51 unit: _forEachVoxelWithinRadiusSimple() file: packages/miew/src/chem/VoxelWorld.js start line: 244 end line: 300 size: 49 LOC McCabe index: 7 number of parameters: 3 id: 52 unit: function AVHash() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 19 end line: 151 size: 49 LOC McCabe index: 7 number of parameters: 4 id: 53 unit: Miew.prototype.load = function() file: packages/miew/src/Miew.js start line: 1982 end line: 2037 size: 48 LOC McCabe index: 6 number of parameters: 2 id: 54 unit: Miew.prototype._onPick = function() file: packages/miew/src/Miew.js start line: 2795 end line: 2853 size: 48 LOC McCabe index: 11 number of parameters: 1 id: 55 unit: float getShadow() file: packages/miew/src/gfx/shaders/Uber.frag start line: 338 end line: 396 size: 48 LOC McCabe index: 3 number of parameters: 5 id: 56 unit: function Picker() file: packages/miew/src/ui/Picker.js start line: 6 end line: 75 size: 47 LOC McCabe index: 3 number of parameters: 3 id: 57 unit: rebuild() file: packages/miew/src/ComplexVisual.js start line: 587 end line: 645 size: 47 LOC McCabe index: 13 number of parameters: 0 id: 58 unit: performAction: function anonymous() file: packages/miew/src/utils/SelectionParser.js start line: 607 end line: 653 size: 47 LOC McCabe index: 22 number of parameters: 4 id: 59 unit: function resolveSourceShortcut() file: packages/miew/src/Miew.js start line: 1760 end line: 1818 size: 47 LOC McCabe index: 11 number of parameters: 2 id: 60 unit: rep() file: packages/miew/src/ComplexVisual.js start line: 159 end line: 218 size: 46 LOC McCabe index: 14 number of parameters: 2 id: 61 unit: function Miew() file: packages/miew/src/Miew.js start line: 119 end line: 200 size: 45 LOC McCabe index: 9 number of parameters: 1 id: 62 unit: performAction: function anonymous() file: packages/miew/src/utils/SelectionParser.js start line: 83 end line: 128 size: 44 LOC McCabe index: 16 number of parameters: 7 id: 63 unit: function _addPointsForLoneResidue() file: packages/miew/src/gfx/modes/groups/CartoonHelper.js start line: 44 end line: 94 size: 44 LOC McCabe index: 12 number of parameters: 4 id: 64 unit: _updateSecStructure() file: packages/miew/src/io/parsers/MMTFParser.js start line: 168 end line: 215 size: 43 LOC McCabe index: 13 number of parameters: 3 id: 65 unit: _breadWidthSearch() file: packages/miew/src/io/parsers/CMLParser.js start line: 390 end line: 441 size: 43 LOC McCabe index: 10 number of parameters: 2 id: 66 unit: getAltObj() file: packages/miew/src/ComplexVisualEdit.js start line: 76 end line: 130 size: 43 LOC McCabe index: 8 number of parameters: 0 id: 67 unit: updateToFrame() file: packages/miew/src/gfx/modes/groups/BondsCylinderGroup.js start line: 51 end line: 95 size: 43 LOC McCabe index: 6 number of parameters: 1 id: 68 unit: buildNormals() file: packages/miew/src/gfx/geometries/IsosurfaceBuildNormals.js start line: 219 end line: 292 size: 43 LOC McCabe index: 4 number of parameters: 3 id: 69 unit: writeString() file: packages/miew/src/io/exporters/PDBResult.js start line: 90 end line: 149 size: 42 LOC McCabe index: 16 number of parameters: 3 id: 70 unit: function updateCMLData() file: packages/miew/src/Miew.js start line: 4131 end line: 4175 size: 42 LOC McCabe index: 6 number of parameters: 1 id: 71 unit: _build() file: packages/miew/src/gfx/modes/groups/BondsCylinderGroup.js start line: 5 end line: 49 size: 42 LOC McCabe index: 5 number of parameters: 0 id: 72 unit: resetReps() file: packages/miew/src/ComplexVisual.js start line: 77 end line: 123 size: 40 LOC McCabe index: 9 number of parameters: 1 id: 73 unit: joinComplexes() file: packages/miew/src/chem/Complex.js start line: 779 end line: 853 size: 40 LOC McCabe index: 4 number of parameters: 1 id: 74 unit: function ContactSurface() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 152 end line: 616 size: 40 LOC McCabe index: 3 number of parameters: 4 id: 75 unit: _parseATOM() file: packages/miew/src/io/parsers/PDBParser.js start line: 159 end line: 213 size: 39 LOC McCabe index: 14 number of parameters: 1 id: 76 unit: calcNormalDir() file: packages/miew/src/chem/Bond.js start line: 148 end line: 186 size: 39 LOC McCabe index: 9 number of parameters: 1 id: 77 unit: getNumIntersectedCells() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 372 end line: 419 size: 39 LOC McCabe index: 8 number of parameters: 4 id: 78 unit: constructor() file: packages/miew/src/gfx/VolumeMesh.js start line: 8 end line: 51 size: 39 LOC McCabe index: 1 number of parameters: 0 id: 79 unit: ObjectControls.prototype.mousedown = function() file: packages/miew/src/ui/ObjectControls.js start line: 608 end line: 654 size: 38 LOC McCabe index: 16 number of parameters: 1 id: 80 unit: _parseAtom() file: packages/miew/src/io/parsers/GROParser.js start line: 90 end line: 136 size: 38 LOC McCabe index: 8 number of parameters: 1 id: 81 unit: computeBoundaries() file: packages/miew/src/chem/BiologicalUnit.js start line: 20 end line: 60 size: 38 LOC McCabe index: 8 number of parameters: 0 id: 82 unit: computeGradient() file: packages/miew/src/chem/Volume.js start line: 139 end line: 204 size: 38 LOC McCabe index: 7 number of parameters: 0 id: 83 unit: _writeRelations() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 276 end line: 314 size: 37 LOC McCabe index: 3 number of parameters: 0 id: 84 unit: function _calcPoints() file: packages/miew/src/gfx/modes/groups/CartoonHelper.js start line: 96 end line: 152 size: 37 LOC McCabe index: 6 number of parameters: 4 id: 85 unit: constructor() file: packages/miew/src/gfx/modes/processors/AromaticProcessor.js start line: 4 end line: 42 size: 37 LOC McCabe index: 5 number of parameters: 8 id: 86 unit: constructor() file: packages/miew/src/gfx/shaders/UberMaterial.js start line: 124 end line: 188 size: 37 LOC McCabe index: 1 number of parameters: 1 id: 87 unit: Miew.prototype._continueAnimation = function() file: packages/miew/src/Miew.js start line: 2120 end line: 2155 size: 36 LOC McCabe index: 5 number of parameters: 0 id: 88 unit: Miew.prototype.screenshot = function() file: packages/miew/src/Miew.js start line: 3142 end line: 3216 size: 36 LOC McCabe index: 6 number of parameters: 2 id: 89 unit: Miew.prototype.setOptions = function() file: packages/miew/src/Miew.js start line: 3310 end line: 3351 size: 36 LOC McCabe index: 10 number of parameters: 1 id: 90 unit: getAtomByFullname() file: packages/miew/src/chem/Complex.js start line: 133 end line: 171 size: 36 LOC McCabe index: 9 number of parameters: 1 id: 91 unit: _fromGeo() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 30 end line: 69 size: 36 LOC McCabe index: 6 number of parameters: 1 id: 92 unit: getBoundingBox() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 105 end line: 142 size: 36 LOC McCabe index: 9 number of parameters: 3 id: 93 unit: void main() file: packages/miew/src/gfx/shaders/AO.frag start line: 47 end line: 98 size: 36 LOC McCabe index: 5 number of parameters: 0 id: 94 unit: bool intersect_ray_cylinder() file: packages/miew/src/gfx/shaders/Uber.frag start line: 190 end line: 237 size: 36 LOC McCabe index: 12 number of parameters: 4 id: 95 unit: _extractSheets() file: packages/miew/src/io/parsers/CIFParser.js start line: 356 end line: 408 size: 35 LOC McCabe index: 14 number of parameters: 2 id: 96 unit: _parseAtoms() file: packages/miew/src/io/parsers/MOL2Parser.js start line: 130 end line: 177 size: 35 LOC McCabe index: 8 number of parameters: 2 id: 97 unit: _extractAtoms() file: packages/miew/src/io/parsers/PubChemParser.js start line: 37 end line: 76 size: 35 LOC McCabe index: 27 number of parameters: 2 id: 98 unit: setItem() file: packages/miew/src/gfx/geometries/Simple2CCylindersGeometry.js start line: 22 end line: 62 size: 35 LOC McCabe index: 4 number of parameters: 4 id: 99 unit: this.withinRadii = function() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 106 end line: 150 size: 35 LOC McCabe index: 6 number of parameters: 5 id: 100 unit: bool intersect_ray_sphere() file: packages/miew/src/gfx/shaders/Uber.frag start line: 108 end line: 146 size: 35 LOC McCabe index: 7 number of parameters: 4 id: 101 unit: change() file: packages/miew/src/gfx/Representation.js start line: 145 end line: 188 size: 35 LOC McCabe index: 9 number of parameters: 4 id: 102 unit: def write_csv() file: packages/miew/tools/pdbfreq.py start line: 0 end line: 0 size: 34 LOC McCabe index: 13 number of parameters: 0 id: 103 unit: Picker.prototype.pickObject = function() file: packages/miew/src/ui/Picker.js start line: 102 end line: 138 size: 34 LOC McCabe index: 15 number of parameters: 1 id: 104 unit: function decode() file: packages/miew/src/Miew.js start line: 3883 end line: 3923 size: 34 LOC McCabe index: 6 number of parameters: 0 id: 105 unit: build() file: packages/miew/src/gfx/objects/LinesObj.js start line: 26 end line: 63 size: 34 LOC McCabe index: 2 number of parameters: 1 id: 106 unit: _polygonize() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 181 end line: 220 size: 34 LOC McCabe index: 4 number of parameters: 3 id: 107 unit: vertexFusion() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 402 end line: 439 size: 34 LOC McCabe index: 9 number of parameters: 2 id: 108 unit: _flattenModels() file: packages/miew/src/io/exporters/fbx/FBXInfoExtractor.js start line: 70 end line: 108 size: 33 LOC McCabe index: 3 number of parameters: 0 id: 109 unit: _resetComponentTransform() file: packages/miew/src/ComplexVisualEdit.js start line: 147 end line: 184 size: 33 LOC McCabe index: 8 number of parameters: 0 id: 110 unit: constructor() file: packages/miew/src/gfx/geometries/LabelsGeometry.js start line: 31 end line: 66 size: 33 LOC McCabe index: 8 number of parameters: 2 id: 111 unit: _init() file: packages/miew/src/gfx/geometries/Instanced2CCylindersGeometry.js start line: 183 end line: 219 size: 33 LOC McCabe index: 2 number of parameters: 3 id: 112 unit: copy() file: packages/miew/src/gfx/shaders/UberMaterial.js start line: 197 end line: 234 size: 33 LOC McCabe index: 1 number of parameters: 1 id: 113 unit: repAdd() file: packages/miew/src/ComplexVisual.js start line: 254 end line: 295 size: 32 LOC McCabe index: 4 number of parameters: 1 id: 114 unit: _buildSelectorFromSortedLists() file: packages/miew/src/ComplexVisual.js start line: 686 end line: 742 size: 32 LOC McCabe index: 11 number of parameters: 3 id: 115 unit: parseSync() file: packages/miew/src/io/parsers/CMLParser.js start line: 624 end line: 657 size: 32 LOC McCabe index: 6 number of parameters: 0 id: 116 unit: parse() file: packages/miew/src/io/parsers/pdb/Remark350.js start line: 32 end line: 69 size: 32 LOC McCabe index: 10 number of parameters: 1 id: 117 unit: _writeHeader() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 163 end line: 196 size: 32 LOC McCabe index: 1 number of parameters: 0 id: 118 unit: _collectSpheresInfo() file: packages/miew/src/io/exporters/fbx/FBXInfoExtractor.js start line: 169 end line: 203 size: 32 LOC McCabe index: 2 number of parameters: 1 id: 119 unit: load() file: packages/miew/src/io/loaders/XHRLoader.js start line: 15 end line: 49 size: 32 LOC McCabe index: 5 number of parameters: 0 id: 120 unit: checkArg() file: packages/miew/src/Miew-cli.js start line: 191 end line: 227 size: 32 LOC McCabe index: 9 number of parameters: 3 id: 121 unit: propagateProp() file: packages/miew/src/Miew-cli.js start line: 229 end line: 264 size: 32 LOC McCabe index: 15 number of parameters: 2 id: 122 unit: buildColors() file: packages/miew/src/gfx/geometries/IsosurfaceBuildNormals.js start line: 304 end line: 363 size: 32 LOC McCabe index: 3 number of parameters: 4 id: 123 unit: _prepareAxesAndDirs() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 105 end line: 147 size: 32 LOC McCabe index: 16 number of parameters: 0 id: 124 unit: function extractArgs() file: packages/miew/src/options.js start line: 117 end line: 147 size: 31 LOC McCabe index: 8 number of parameters: 3 id: 125 unit: function _parseData() file: packages/miew/src/Miew.js start line: 1936 end line: 1970 size: 31 LOC McCabe index: 4 number of parameters: 3 id: 126 unit: constructor() file: packages/miew/src/gfx/modes/processors/SubseqsProcessor.js start line: 4 end line: 37 size: 31 LOC McCabe index: 5 number of parameters: 8 id: 127 unit: _extractAssemblies() file: packages/miew/src/io/parsers/CIFParser.js start line: 486 end line: 518 size: 30 LOC McCabe index: 9 number of parameters: 2 id: 128 unit: function parseNode() file: packages/miew/src/io/parsers/CMLParser.js start line: 191 end line: 223 size: 30 LOC McCabe index: 8 number of parameters: 2 id: 129 unit: _build() file: packages/miew/src/chem/SecondaryStructureMap.js start line: 34 end line: 69 size: 30 LOC McCabe index: 6 number of parameters: 0 id: 130 unit: _fillCmpEdit() file: packages/miew/src/chem/Complex.js start line: 298 end line: 339 size: 30 LOC McCabe index: 8 number of parameters: 0 id: 131 unit: addPair() file: packages/miew/src/chem/AtomPairs.js start line: 38 end line: 71 size: 30 LOC McCabe index: 8 number of parameters: 2 id: 132 unit: function _createExtrudedChunkGeometry() file: packages/miew/src/gfx/geometries/ExtrudedObjectsGeometry.js start line: 14 end line: 50 size: 30 LOC McCabe index: 5 number of parameters: 2 id: 133 unit: function _extractOperations() file: packages/miew/src/io/parsers/CIFParser.js start line: 104 end line: 146 size: 29 LOC McCabe index: 6 number of parameters: 2 id: 134 unit: _setOrigins() file: packages/miew/src/io/parsers/CCP4Parser.js start line: 66 end line: 99 size: 29 LOC McCabe index: 5 number of parameters: 0 id: 135 unit: parseSync() file: packages/miew/src/io/parsers/GROParser.js start line: 160 end line: 199 size: 29 LOC McCabe index: 5 number of parameters: 0 id: 136 unit: Miew.prototype._rebuildObjects = function() file: packages/miew/src/Miew.js start line: 2339 end line: 2369 size: 29 LOC McCabe index: 7 number of parameters: 0 id: 137 unit: Miew.prototype.rebuild = function() file: packages/miew/src/Miew.js start line: 2399 end line: 2434 size: 29 LOC McCabe index: 3 number of parameters: 0 id: 138 unit: _build() file: packages/miew/src/chem/HBondInfo.js start line: 35 end line: 70 size: 29 LOC McCabe index: 11 number of parameters: 0 id: 139 unit: constructor() file: packages/miew/src/chem/Volume.js start line: 30 end line: 100 size: 29 LOC McCabe index: 7 number of parameters: 6 id: 140 unit: function _loopThrough() file: packages/miew/src/gfx/modes/groups/ResiduesSubseqGroup.js start line: 17 end line: 49 size: 29 LOC McCabe index: 7 number of parameters: 6 id: 141 unit: updateToFrame() file: packages/miew/src/gfx/modes/groups/ResiduesTraceGroup.js start line: 47 end line: 80 size: 29 LOC McCabe index: 5 number of parameters: 1 id: 142 unit: constructor() file: packages/miew/src/gfx/modes/processors/BondsProcessor.js start line: 4 end line: 33 size: 29 LOC McCabe index: 4 number of parameters: 8 id: 143 unit: constructor() file: packages/miew/src/gfx/VolumeBounds.js start line: 24 end line: 58 size: 29 LOC McCabe index: 4 number of parameters: 2 id: 144 unit: function _fromArray() file: packages/miew/src/options.js start line: 227 end line: 260 size: 28 LOC McCabe index: 7 number of parameters: 1 id: 145 unit: unput:function() file: packages/miew/src/utils/SelectionParser.js start line: 341 end line: 373 size: 28 LOC McCabe index: 5 number of parameters: 1 id: 146 unit: Miew.prototype._extractRepresentation = function() file: packages/miew/src/Miew.js start line: 2463 end line: 2495 size: 28 LOC McCabe index: 6 number of parameters: 0 id: 147 unit: Miew.prototype.center = function() file: packages/miew/src/Miew.js start line: 4004 end line: 4033 size: 28 LOC McCabe index: 9 number of parameters: 1 id: 148 unit: _fillCmpNoedit() file: packages/miew/src/chem/Complex.js start line: 343 end line: 375 size: 28 LOC McCabe index: 7 number of parameters: 0 id: 149 unit: enable() file: packages/miew/src/gfx/vr/WebVRPoC.js start line: 63 end line: 97 size: 28 LOC McCabe index: 6 number of parameters: 1 id: 150 unit: _build() file: packages/miew/src/gfx/modes/groups/ResiduesTraceGroup.js start line: 16 end line: 45 size: 28 LOC McCabe index: 4 number of parameters: 0 id: 151 unit: constructor() file: packages/miew/src/gfx/modes/processors/AtomsProcessor.js start line: 4 end line: 32 size: 28 LOC McCabe index: 3 number of parameters: 8 id: 152 unit: raycast() file: packages/miew/src/gfx/meshes/TransformGroup.js start line: 23 end line: 53 size: 28 LOC McCabe index: 5 number of parameters: 2 id: 153 unit: void main() file: packages/miew/src/gfx/shaders/Volume.frag start line: 255 end line: 287 size: 28 LOC McCabe index: 4 number of parameters: 0 id: 154 unit: _sortIndices() file: packages/miew/src/gfx/VolumeMesh.js start line: 241 end line: 271 size: 28 LOC McCabe index: 5 number of parameters: 2 id: 155 unit: THREE.Raycaster.prototype.intersectVisibleObject = function() file: packages/miew/src/gfx/gfxutils.js start line: 189 end line: 220 size: 28 LOC McCabe index: 6 number of parameters: 4 id: 156 unit: shrinkSelection() file: packages/miew/src/ComplexVisual.js start line: 497 end line: 530 size: 27 LOC McCabe index: 7 number of parameters: 0 id: 157 unit: buildSelectorFromMask() file: packages/miew/src/ComplexVisual.js start line: 744 end line: 774 size: 27 LOC McCabe index: 7 number of parameters: 1 id: 158 unit: _parseAtomsInf() file: packages/miew/src/io/parsers/XYZParser.js start line: 45 end line: 77 size: 27 LOC McCabe index: 3 number of parameters: 0 id: 159 unit: _parseAtoms() file: packages/miew/src/io/parsers/SDFParser.js start line: 90 end line: 120 size: 27 LOC McCabe index: 4 number of parameters: 2 id: 160 unit: _collectGeoInfo() file: packages/miew/src/io/exporters/fbx/FBXInfoExtractor.js start line: 136 end line: 163 size: 27 LOC McCabe index: 2 number of parameters: 1 id: 161 unit: _extractSHEET() file: packages/miew/src/io/exporters/PDBExporter.js start line: 103 end line: 131 size: 27 LOC McCabe index: 5 number of parameters: 1 id: 162 unit: _extractATOM() file: packages/miew/src/io/exporters/PDBExporter.js start line: 160 end line: 187 size: 27 LOC McCabe index: 7 number of parameters: 1 id: 163 unit: function updateBinaryMode() file: packages/miew/src/Miew.js start line: 1820 end line: 1855 size: 27 LOC McCabe index: 14 number of parameters: 1 id: 164 unit: Miew.prototype._enterFragmentEditMode = function() file: packages/miew/src/Miew.js start line: 2722 end line: 2753 size: 27 LOC McCabe index: 6 number of parameters: 0 id: 165 unit: Miew.prototype._compareReps = function() file: packages/miew/src/Miew.js start line: 3477 end line: 3506 size: 27 LOC McCabe index: 9 number of parameters: 2 id: 166 unit: forEachLevelTwo() file: packages/miew/src/chem/Bond.js start line: 79 end line: 106 size: 27 LOC McCabe index: 5 number of parameters: 1 id: 167 unit: _findNumVoxels() file: packages/miew/src/gfx/geometries/VolumeSurfaceGeometry.js start line: 44 end line: 76 size: 27 LOC McCabe index: 4 number of parameters: 2 id: 168 unit: _initVertices() file: packages/miew/src/gfx/geometries/ThickLinesGeometry.js start line: 139 end line: 167 size: 27 LOC McCabe index: 3 number of parameters: 1 id: 169 unit: _init() file: packages/miew/src/gfx/geometries/ChunkedObjectsGeometry.js start line: 113 end line: 141 size: 27 LOC McCabe index: 4 number of parameters: 2 id: 170 unit: float CalcColor() file: packages/miew/src/gfx/shaders/Volume.frag start line: 63 end line: 94 size: 27 LOC McCabe index: 1 number of parameters: 2 id: 171 unit: Picker.prototype.mouseup = function() file: packages/miew/src/ui/Picker.js start line: 166 end line: 198 size: 26 LOC McCabe index: 5 number of parameters: 1 id: 172 unit: ObjectControls.prototype.mousemove = function() file: packages/miew/src/ui/ObjectControls.js start line: 656 end line: 686 size: 26 LOC McCabe index: 8 number of parameters: 1 id: 173 unit: ObjectControls.prototype.touchstartend = function() file: packages/miew/src/ui/ObjectControls.js start line: 725 end line: 756 size: 26 LOC McCabe index: 4 number of parameters: 1 id: 174 unit: ObjectControls.prototype.touchmove = function() file: packages/miew/src/ui/ObjectControls.js start line: 758 end line: 789 size: 26 LOC McCabe index: 6 number of parameters: 1 id: 175 unit: _fillHeader() file: packages/miew/src/io/parsers/VolumeModel.js start line: 42 end line: 71 size: 26 LOC McCabe index: 7 number of parameters: 2 id: 176 unit: _materialProperties() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 430 end line: 455 size: 26 LOC McCabe index: 1 number of parameters: 1 id: 177 unit: _getSphereInstanceMatrix() file: packages/miew/src/io/exporters/fbx/FBXInfoExtractor.js start line: 367 end line: 392 size: 26 LOC McCabe index: 1 number of parameters: 3 id: 178 unit: load() file: packages/miew/src/io/loaders/FileLoader.js start line: 11 end line: 39 size: 26 LOC McCabe index: 3 number of parameters: 0 id: 179 unit: function createElement() file: packages/miew/src/utils.js start line: 118 end line: 143 size: 26 LOC McCabe index: 8 number of parameters: 3 id: 180 unit: function deriveDeep() file: packages/miew/src/utils.js start line: 167 end line: 192 size: 26 LOC McCabe index: 8 number of parameters: 2 id: 181 unit: _setControllersListeners() file: packages/miew/src/gfx/vr/WebVRPoC.js start line: 117 end line: 143 size: 26 LOC McCabe index: 1 number of parameters: 0 id: 182 unit: constructor() file: packages/miew/src/gfx/modes/processors/ResiduesProcessor.js start line: 4 end line: 31 size: 26 LOC McCabe index: 3 number of parameters: 8 id: 183 unit: setFrame() file: packages/miew/src/gfx/FrameInfo.js start line: 265 end line: 290 size: 26 LOC McCabe index: 6 number of parameters: 1 id: 184 unit: checkBufferGeometryIntersection() file: packages/miew/src/gfx/geometries/RaycastableBufferGeometry.js start line: 52 end line: 81 size: 26 LOC McCabe index: 3 number of parameters: 8 id: 185 unit: constructor() file: packages/miew/src/gfx/geometries/IsoSurfaceGeo.js start line: 12 end line: 38 size: 26 LOC McCabe index: 6 number of parameters: 3 id: 186 unit: constructor() file: packages/miew/src/gfx/shaders/AOMaterial.js start line: 45 end line: 72 size: 26 LOC McCabe index: 1 number of parameters: 0 id: 187 unit: function toURL() file: packages/miew/src/options.js start line: 303 end line: 366 size: 25 LOC McCabe index: 4 number of parameters: 1 id: 188 unit: _selectComponents() file: packages/miew/src/io/parsers/CMLParser.js start line: 256 end line: 377 size: 25 LOC McCabe index: 5 number of parameters: 1 id: 189 unit: _toXYZData() file: packages/miew/src/io/parsers/CCP4Parser.js start line: 101 end line: 128 size: 25 LOC McCabe index: 4 number of parameters: 0 id: 190 unit: _extractHELIX() file: packages/miew/src/io/exporters/PDBExporter.js start line: 133 end line: 158 size: 25 LOC McCabe index: 3 number of parameters: 1 id: 191 unit: constructor() file: packages/miew/src/chem/Atom.js start line: 23 end line: 51 size: 25 LOC McCabe index: 5 number of parameters: 11 id: 192 unit: _detectLeadWing() file: packages/miew/src/chem/Residue.js start line: 152 end line: 181 size: 25 LOC McCabe index: 11 number of parameters: 3 id: 193 unit: _findPairs() file: packages/miew/src/chem/AutoBond.js start line: 74 end line: 130 size: 25 LOC McCabe index: 4 number of parameters: 0 id: 194 unit: function _createSecondary() file: packages/miew/src/gfx/FrameInfo.js start line: 22 end line: 48 size: 25 LOC McCabe index: 7 number of parameters: 2 id: 195 unit: function _prepareCylinderInfo() file: packages/miew/src/gfx/geometries/Instanced2CCylindersGeometry.js start line: 32 end line: 56 size: 25 LOC McCabe index: 5 number of parameters: 1 id: 196 unit: function _getOperations() file: packages/miew/src/io/parsers/CIFParser.js start line: 77 end line: 102 size: 24 LOC McCabe index: 7 number of parameters: 1 id: 197 unit: _extractSGroup() file: packages/miew/src/io/parsers/CMLParser.js start line: 77 end line: 102 size: 24 LOC McCabe index: 8 number of parameters: 2 id: 198 unit: _getCylinderInstanceMatrix() file: packages/miew/src/io/exporters/fbx/FBXInfoExtractor.js start line: 342 end line: 365 size: 24 LOC McCabe index: 1 number of parameters: 3 id: 199 unit: constructor() file: packages/miew/src/io/exporters/PDBExporter.js start line: 9 end line: 33 size: 24 LOC McCabe index: 1 number of parameters: 2 id: 200 unit: _Remark350() file: packages/miew/src/io/exporters/PDBExporter.js start line: 232 end line: 259 size: 24 LOC McCabe index: 3 number of parameters: 1 id: 201 unit: Miew.prototype.loadEd = function() file: packages/miew/src/Miew.js start line: 2293 end line: 2318 size: 24 LOC McCabe index: 3 number of parameters: 1 id: 202 unit: Miew.prototype.motm = function() file: packages/miew/src/Miew.js start line: 4195 end line: 4219 size: 24 LOC McCabe index: 2 number of parameters: 0 id: 203 unit: _buildVW() file: packages/miew/src/chem/HBondInfo.js start line: 72 end line: 129 size: 24 LOC McCabe index: 8 number of parameters: 0 id: 204 unit: constructor() file: packages/miew/src/chem/Residue.js start line: 33 end line: 57 size: 24 LOC McCabe index: 1 number of parameters: 4 id: 205 unit: _addCut() file: packages/miew/src/gfx/geometries/ExtrudedObjectsGeometry.js start line: 166 end line: 196 size: 24 LOC McCabe index: 6 number of parameters: 3 id: 206 unit: function obscured() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 303 end line: 333 size: 24 LOC McCabe index: 9 number of parameters: 5 id: 207 unit: setItem() file: packages/miew/src/gfx/geometries/CylinderCollisionGeo.js start line: 21 end line: 47 size: 24 LOC McCabe index: 3 number of parameters: 4 id: 208 unit: void main() file: packages/miew/src/gfx/shaders/AOHorBlur.frag start line: 12 end line: 37 size: 24 LOC McCabe index: 4 number of parameters: 0 id: 209 unit: rebuildSelectionGeometry() file: packages/miew/src/ComplexVisual.js start line: 655 end line: 684 size: 23 LOC McCabe index: 7 number of parameters: 0 id: 210 unit: _updateMolecules() file: packages/miew/src/io/parsers/MMTFParser.js start line: 217 end line: 241 size: 23 LOC McCabe index: 5 number of parameters: 1 id: 211 unit: _joinSynonymousChains() file: packages/miew/src/io/parsers/MMTFParser.js start line: 419 end line: 450 size: 23 LOC McCabe index: 4 number of parameters: 0 id: 212 unit: Miew.prototype._resizeOffscreenBuffers = function() file: packages/miew/src/Miew.js start line: 919 end line: 941 size: 23 LOC McCabe index: 8 number of parameters: 3 id: 213 unit: Miew.prototype._getAltObj = function() file: packages/miew/src/Miew.js start line: 3003 end line: 3026 size: 23 LOC McCabe index: 6 number of parameters: 0 id: 214 unit: Miew.prototype._tweakResolution = function() file: packages/miew/src/Miew.js start line: 3245 end line: 3269 size: 23 LOC McCabe index: 4 number of parameters: 0 id: 215 unit: _findLoops() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 217 end line: 240 size: 23 LOC McCabe index: 4 number of parameters: 2 id: 216 unit: function processAtom() file: packages/miew/src/chem/HBondInfo.js start line: 85 end line: 112 size: 23 LOC McCabe index: 9 number of parameters: 1 id: 217 unit: disable() file: packages/miew/src/gfx/vr/WebVRPoC.js start line: 145 end line: 174 size: 23 LOC McCabe index: 6 number of parameters: 0 id: 218 unit: updateToFrame() file: packages/miew/src/gfx/modes/groups/AtomsTextGroup.js start line: 127 end line: 151 size: 23 LOC McCabe index: 6 number of parameters: 1 id: 219 unit: _prepareBuffer() file: packages/miew/src/gfx/FrameInfo.js start line: 77 end line: 122 size: 23 LOC McCabe index: 10 number of parameters: 2 id: 220 unit: function createLabel() file: packages/miew/src/gfx/geometries/LabelsGeometry.js start line: 4 end line: 29 size: 23 LOC McCabe index: 4 number of parameters: 2 id: 221 unit: createVertexHash() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 520 end line: 544 size: 23 LOC McCabe index: 5 number of parameters: 2 id: 222 unit: getSubset() file: packages/miew/src/gfx/geometries/ChunkedObjectsGeometry.js start line: 84 end line: 111 size: 23 LOC McCabe index: 2 number of parameters: 1 id: 223 unit: copy() file: packages/miew/src/gfx/shaders/UberMaterial.js start line: 98 end line: 120 size: 23 LOC McCabe index: 1 number of parameters: 1 id: 224 unit: constructor() file: packages/miew/src/gfx/shaders/AOVertBlurWithBlendMaterial.js start line: 10 end line: 35 size: 23 LOC McCabe index: 1 number of parameters: 1 id: 225 unit: expandSelection() file: packages/miew/src/ComplexVisual.js start line: 469 end line: 495 size: 22 LOC McCabe index: 5 number of parameters: 0 id: 226 unit: _parseBonds() file: packages/miew/src/io/parsers/MOL2Parser.js start line: 205 end line: 230 size: 22 LOC McCabe index: 6 number of parameters: 2 id: 227 unit: compare() file: packages/miew/src/io/parsers/MMTFParser.js start line: 32 end line: 58 size: 22 LOC McCabe index: 6 number of parameters: 1 id: 228 unit: _onAtom() file: packages/miew/src/io/parsers/MMTFParser.js start line: 127 end line: 151 size: 22 LOC McCabe index: 3 number of parameters: 1 id: 229 unit: _findSuitableMolecule() file: packages/miew/src/io/parsers/CMLParser.js start line: 233 end line: 254 size: 22 LOC McCabe index: 14 number of parameters: 2 id: 230 unit: _finalizeMolecules() file: packages/miew/src/io/parsers/PDBParser.js start line: 99 end line: 123 size: 22 LOC McCabe index: 4 number of parameters: 0 id: 231 unit: parseSync() file: packages/miew/src/io/parsers/PDBParser.js start line: 430 end line: 459 size: 22 LOC McCabe index: 4 number of parameters: 0 id: 232 unit: newTag() file: packages/miew/src/io/exporters/PDBResult.js start line: 27 end line: 48 size: 22 LOC McCabe index: 5 number of parameters: 2 id: 233 unit: function download() file: packages/miew/src/utils.js start line: 435 end line: 459 size: 22 LOC McCabe index: 8 number of parameters: 3 id: 234 unit: Miew.prototype._enableMRT = function() file: packages/miew/src/Miew.js start line: 1184 end line: 1214 size: 22 LOC McCabe index: 2 number of parameters: 3 id: 235 unit: Miew.prototype._export = function() file: packages/miew/src/Miew.js start line: 1732 end line: 1754 size: 22 LOC McCabe index: 6 number of parameters: 1 id: 236 unit: _parseBuffer() file: packages/miew/src/gfx/FrameInfo.js start line: 124 end line: 145 size: 22 LOC McCabe index: 5 number of parameters: 0 id: 237 unit: _updateSecondary() file: packages/miew/src/gfx/FrameInfo.js start line: 222 end line: 243 size: 22 LOC McCabe index: 4 number of parameters: 0 id: 238 unit: computeBoundingSphere() file: packages/miew/src/gfx/geometries/LinesGeometry.js start line: 15 end line: 37 size: 22 LOC McCabe index: 5 number of parameters: 0 id: 239 unit: setSegment() file: packages/miew/src/gfx/geometries/ThickLinesGeometry.js start line: 70 end line: 91 size: 22 LOC McCabe index: 1 number of parameters: 3 id: 240 unit: function optimizeList() file: packages/miew/src/ComplexVisual.js start line: 689 end line: 709 size: 21 LOC McCabe index: 5 number of parameters: 1 id: 241 unit: _setResidue() file: packages/miew/src/io/parsers/MOL2Parser.js start line: 179 end line: 200 size: 21 LOC McCabe index: 9 number of parameters: 1 id: 242 unit: _markHeteroAtoms() file: packages/miew/src/io/parsers/MMTFParser.js start line: 395 end line: 416 size: 21 LOC McCabe index: 7 number of parameters: 1 id: 243 unit: _parseCOMPND() file: packages/miew/src/io/parsers/PDBParser.js start line: 245 end line: 271 size: 21 LOC McCabe index: 9 number of parameters: 1 id: 244 unit: getAltObj() file: packages/miew/src/ComplexVisualEdit.js start line: 319 end line: 344 size: 21 LOC McCabe index: 4 number of parameters: 0 id: 245 unit: _getSelectionBorderAtoms() file: packages/miew/src/ComplexVisualEdit.js start line: 346 end line: 370 size: 21 LOC McCabe index: 5 number of parameters: 0 id: 246 unit: Miew.prototype._startAnimation = function() file: packages/miew/src/Miew.js start line: 2057 end line: 2090 size: 21 LOC McCabe index: 3 number of parameters: 1 id: 247 unit: _fixDir() file: packages/miew/src/chem/Bond.js start line: 108 end line: 146 size: 21 LOC McCabe index: 4 number of parameters: 3 id: 248 unit: isConnected() file: packages/miew/src/chem/Residue.js start line: 222 end line: 242 size: 21 LOC McCabe index: 6 number of parameters: 1 id: 249 unit: const processAtom = function() file: packages/miew/src/chem/AutoBond.js start line: 90 end line: 115 size: 21 LOC McCabe index: 9 number of parameters: 1 id: 250 unit: listRep() file: packages/miew/src/Miew-cli.js start line: 113 end line: 137 size: 21 LOC McCabe index: 4 number of parameters: 4 id: 251 unit: buildGeometry() file: packages/miew/src/gfx/modes/Mode.js start line: 47 end line: 67 size: 21 LOC McCabe index: 5 number of parameters: 4 id: 252 unit: constructor() file: packages/miew/src/gfx/FrameInfo.js start line: 55 end line: 75 size: 21 LOC McCabe index: 2 number of parameters: 3 id: 253 unit: init() file: packages/miew/src/gfx/meshes/TextMesh.js start line: 18 end line: 39 size: 21 LOC McCabe index: 4 number of parameters: 0 id: 254 unit: addTriangle() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 226 end line: 251 size: 21 LOC McCabe index: 5 number of parameters: 3 id: 255 unit: getSubset() file: packages/miew/src/gfx/geometries/Instanced2CCylindersGeometry.js start line: 154 end line: 177 size: 21 LOC McCabe index: 2 number of parameters: 1 id: 256 unit: _countNormalsInRing() file: packages/miew/src/gfx/geometries/ExtrudedObjectsGeometry.js start line: 140 end line: 164 size: 21 LOC McCabe index: 4 number of parameters: 4 id: 257 unit: function init() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 268 end line: 290 size: 21 LOC McCabe index: 3 number of parameters: 0 id: 258 unit: constructor() file: packages/miew/src/gfx/Representation.js start line: 13 end line: 35 size: 21 LOC McCabe index: 1 number of parameters: 4 id: 259 unit: _parseHeader() file: packages/miew/src/io/parsers/DSN6Parser.js start line: 18 end line: 42 size: 20 LOC McCabe index: 4 number of parameters: 1 id: 260 unit: _parseCONECT() file: packages/miew/src/io/parsers/PDBParser.js start line: 219 end line: 243 size: 20 LOC McCabe index: 9 number of parameters: 1 id: 261 unit: _models() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 216 end line: 235 size: 20 LOC McCabe index: 2 number of parameters: 0 id: 262 unit: _writeConnections() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 319 end line: 341 size: 20 LOC McCabe index: 3 number of parameters: 0 id: 263 unit: _extendVertices() file: packages/miew/src/io/exporters/fbx/FBX2CCylinder.js start line: 45 end line: 64 size: 20 LOC McCabe index: 1 number of parameters: 2 id: 264 unit: input:function() file: packages/miew/src/utils/SelectionParser.js start line: 318 end line: 338 size: 20 LOC McCabe index: 3 number of parameters: 0 id: 265 unit: Miew.prototype._removeVisual = function() file: packages/miew/src/Miew.js start line: 693 end line: 716 size: 20 LOC McCabe index: 7 number of parameters: 1 id: 266 unit: Miew.prototype.addObject = function() file: packages/miew/src/Miew.js start line: 3374 end line: 3396 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 267 unit: Miew.prototype._updateView = function() file: packages/miew/src/Miew.js start line: 3936 end line: 3958 size: 20 LOC McCabe index: 4 number of parameters: 0 id: 268 unit: setSubDivs() file: packages/miew/src/chem/Component.js start line: 39 end line: 59 size: 20 LOC McCabe index: 4 number of parameters: 1 id: 269 unit: _forEachSubChain() file: packages/miew/src/chem/Component.js start line: 106 end line: 125 size: 20 LOC McCabe index: 8 number of parameters: 2 id: 270 unit: _build() file: packages/miew/src/gfx/modes/groups/AtomsTextGroup.js start line: 106 end line: 125 size: 20 LOC McCabe index: 5 number of parameters: 0 id: 271 unit: const gatherNormals = function() file: packages/miew/src/gfx/geometries/IsosurfaceBuildNormals.js start line: 241 end line: 262 size: 20 LOC McCabe index: 4 number of parameters: 1 id: 272 unit: constructor() file: packages/miew/src/gfx/geometries/SimpleSpheresGeometry.js start line: 9 end line: 29 size: 20 LOC McCabe index: 2 number of parameters: 2 id: 273 unit: function projectTorii() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 550 end line: 569 size: 20 LOC McCabe index: 4 number of parameters: 0 id: 274 unit: bool get_cylinder_point() file: packages/miew/src/gfx/shaders/Uber.frag start line: 239 end line: 266 size: 20 LOC McCabe index: 1 number of parameters: 3 id: 275 unit: constructor() file: packages/miew/src/gfx/shaders/OutlineMaterial.js start line: 8 end line: 30 size: 20 LOC McCabe index: 1 number of parameters: 1 id: 276 unit: buildSelectionGeometry() file: packages/miew/src/gfx/Representation.js start line: 88 end line: 111 size: 20 LOC McCabe index: 7 number of parameters: 1 id: 277 unit: function convertFile() file: packages/miew/tools/jison.js start line: 28 end line: 48 size: 19 LOC McCabe index: 3 number of parameters: 2 id: 278 unit: repRemove() file: packages/miew/src/ComplexVisual.js start line: 301 end line: 325 size: 19 LOC McCabe index: 6 number of parameters: 1 id: 279 unit: function toScript() file: packages/miew/src/options.js start line: 420 end line: 467 size: 19 LOC McCabe index: 2 number of parameters: 1 id: 280 unit: _extractMolecules() file: packages/miew/src/io/parsers/CIFParser.js start line: 212 end line: 234 size: 19 LOC McCabe index: 4 number of parameters: 2 id: 281 unit: _parseToAtomsInf() file: packages/miew/src/io/parsers/XYZParser.js start line: 23 end line: 43 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 282 unit: _createSGroup() file: packages/miew/src/io/parsers/CMLParser.js start line: 57 end line: 75 size: 19 LOC McCabe index: 6 number of parameters: 2 id: 283 unit: _fixBondsArray() file: packages/miew/src/io/parsers/CMLParser.js start line: 450 end line: 470 size: 19 LOC McCabe index: 6 number of parameters: 0 id: 284 unit: constructor() file: packages/miew/src/io/parsers/PDBParser.js start line: 47 end line: 69 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 285 unit: _fixBondsArray() file: packages/miew/src/io/parsers/PDBParser.js start line: 137 end line: 157 size: 19 LOC McCabe index: 6 number of parameters: 0 id: 286 unit: _parseBonds() file: packages/miew/src/io/parsers/SDFParser.js start line: 122 end line: 142 size: 19 LOC McCabe index: 5 number of parameters: 2 id: 287 unit: _gatherCylindersColoringInfo() file: packages/miew/src/io/exporters/fbx/FBXInfoExtractor.js start line: 293 end line: 313 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 288 unit: setInput:function() file: packages/miew/src/utils/SelectionParser.js start line: 297 end line: 315 size: 19 LOC McCabe index: 4 number of parameters: 2 id: 289 unit: function shotDownload() file: packages/miew/src/utils.js start line: 415 end line: 433 size: 19 LOC McCabe index: 8 number of parameters: 2 id: 290 unit: Miew.prototype._onUpdate = function() file: packages/miew/src/Miew.js start line: 1044 end line: 1068 size: 19 LOC McCabe index: 12 number of parameters: 0 id: 291 unit: Miew.prototype._enterComponentEditMode = function() file: packages/miew/src/Miew.js start line: 2659 end line: 2681 size: 19 LOC McCabe index: 4 number of parameters: 0 id: 292 unit: Miew.prototype._clipPlaneUpdateValue = function() file: packages/miew/src/Miew.js start line: 3586 end line: 3605 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 293 unit: Miew.prototype._embedWebXR = function() file: packages/miew/src/Miew.js start line: 3646 end line: 3664 size: 19 LOC McCabe index: 4 number of parameters: 0 id: 294 unit: Miew.prototype.projected = function() file: packages/miew/src/Miew.js start line: 4064 end line: 4087 size: 19 LOC McCabe index: 3 number of parameters: 2 id: 295 unit: _haveSameCycle() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 136 end line: 154 size: 19 LOC McCabe index: 5 number of parameters: 3 id: 296 unit: _finalize() file: packages/miew/src/chem/Chain.js start line: 88 end line: 111 size: 19 LOC McCabe index: 7 number of parameters: 0 id: 297 unit: _finalize() file: packages/miew/src/chem/StructuralElement.js start line: 45 end line: 67 size: 19 LOC McCabe index: 7 number of parameters: 3 id: 298 unit: _unplugVRNodesFromScene() file: packages/miew/src/gfx/vr/WebVRPoC.js start line: 176 end line: 197 size: 19 LOC McCabe index: 5 number of parameters: 1 id: 299 unit: export default function() file: packages/miew/src/gfx/vr/createWebVRButton.js start line: 6 end line: 95 size: 19 LOC McCabe index: 3 number of parameters: 1 id: 300 unit: this._plane._onBeforeRender = function() file: packages/miew/src/gfx/VolumeFarPlane.js start line: 21 end line: 47 size: 19 LOC McCabe index: 3 number of parameters: 6 id: 301 unit: _setSlopeNormals() file: packages/miew/src/gfx/geometries/ExtrudedObjectsGeometry.js start line: 104 end line: 131 size: 19 LOC McCabe index: 5 number of parameters: 3 id: 302 unit: function initializeGrid() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 226 end line: 248 size: 19 LOC McCabe index: 2 number of parameters: 0 id: 303 unit: computeBoundingSphere() file: packages/miew/src/gfx/geometries/SphereCollisionGeo.js start line: 61 end line: 80 size: 19 LOC McCabe index: 4 number of parameters: 0 id: 304 unit: compare() file: packages/miew/src/gfx/Representation.js start line: 117 end line: 140 size: 19 LOC McCabe index: 11 number of parameters: 1 id: 305 unit: end() file: packages/miew/src/gfx/Stats.js start line: 27 end line: 49 size: 19 LOC McCabe index: 3 number of parameters: 0 id: 306 unit: _calculateInfoParams() file: packages/miew/src/io/parsers/DSN6Parser.js start line: 117 end line: 135 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 307 unit: parseSync() file: packages/miew/src/io/parsers/MMTFParser.js start line: 452 end line: 473 size: 18 LOC McCabe index: 1 number of parameters: 0 id: 308 unit: _setAxisIndices() file: packages/miew/src/io/parsers/CCP4Parser.js start line: 45 end line: 64 size: 18 LOC McCabe index: 7 number of parameters: 0 id: 309 unit: parse() file: packages/miew/src/io/parsers/pdb/Remark290.js start line: 25 end line: 46 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 310 unit: _extractCOMPND() file: packages/miew/src/io/exporters/PDBExporter.js start line: 189 end line: 207 size: 18 LOC McCabe index: 3 number of parameters: 1 id: 311 unit: newString() file: packages/miew/src/io/exporters/PDBResult.js start line: 50 end line: 69 size: 18 LOC McCabe index: 6 number of parameters: 1 id: 312 unit: writeEntireString() file: packages/miew/src/io/exporters/PDBResult.js start line: 71 end line: 88 size: 18 LOC McCabe index: 7 number of parameters: 3 id: 313 unit: Logger.prototype._message = function() file: packages/miew/src/utils/logger.js start line: 130 end line: 147 size: 18 LOC McCabe index: 5 number of parameters: 2 id: 314 unit: discard() file: packages/miew/src/ComplexVisualEdit.js start line: 289 end line: 313 size: 18 LOC McCabe index: 4 number of parameters: 0 id: 315 unit: updateToFrame() file: packages/miew/src/chem/Chain.js start line: 113 end line: 135 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 316 unit: addResidue() file: packages/miew/src/chem/Chain.js start line: 145 end line: 164 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 317 unit: _residueGetNH() file: packages/miew/src/chem/HBondInfo.js start line: 159 end line: 180 size: 18 LOC McCabe index: 5 number of parameters: 2 id: 318 unit: getMaskedSubdivSequences() file: packages/miew/src/chem/Component.js start line: 137 end line: 156 size: 18 LOC McCabe index: 2 number of parameters: 1 id: 319 unit: constructor() file: packages/miew/src/chem/Complex.js start line: 45 end line: 65 size: 18 LOC McCabe index: 1 number of parameters: 0 id: 320 unit: _addExistingPairs() file: packages/miew/src/chem/AutoBond.js start line: 54 end line: 72 size: 18 LOC McCabe index: 4 number of parameters: 0 id: 321 unit: const processIfWithin = function() file: packages/miew/src/chem/VoxelWorld.js start line: 401 end line: 420 size: 18 LOC McCabe index: 5 number of parameters: 1 id: 322 unit: prepareMatrices() file: packages/miew/src/gfx/modes/groups/CartoonHelper.js start line: 165 end line: 188 size: 18 LOC McCabe index: 2 number of parameters: 3 id: 323 unit: _onBeforeRender() file: packages/miew/src/gfx/meshes/ZClippedMesh.js start line: 19 end line: 41 size: 18 LOC McCabe index: 3 number of parameters: 3 id: 324 unit: const gatherColors = function() file: packages/miew/src/gfx/geometries/IsosurfaceBuildNormals.js start line: 320 end line: 340 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 325 unit: setDataSource() file: packages/miew/src/gfx/VolumeMesh.js start line: 353 end line: 373 size: 18 LOC McCabe index: 1 number of parameters: 1 id: 326 unit: buildGeometry() file: packages/miew/src/gfx/Representation.js start line: 63 end line: 86 size: 18 LOC McCabe index: 5 number of parameters: 1 id: 327 unit: setMaterialValues() file: packages/miew/src/ComplexVisual.js start line: 818 end line: 836 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 328 unit: _toXYZData() file: packages/miew/src/io/parsers/DSN6Parser.js start line: 96 end line: 115 size: 17 LOC McCabe index: 4 number of parameters: 0 id: 329 unit: parseSync() file: packages/miew/src/io/parsers/XYZParser.js start line: 79 end line: 99 size: 17 LOC McCabe index: 2 number of parameters: 0 id: 330 unit: _traverse() file: packages/miew/src/io/parsers/MMTFParser.js start line: 244 end line: 284 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 331 unit: init() file: packages/miew/src/io/exporters/fbx/FBX2CCylinder.js start line: 24 end line: 42 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 332 unit: _extractHEADER() file: packages/miew/src/io/exporters/PDBExporter.js start line: 54 end line: 70 size: 17 LOC McCabe index: 5 number of parameters: 1 id: 333 unit: function resolveURL() file: packages/miew/src/utils.js start line: 78 end line: 95 size: 17 LOC McCabe index: 5 number of parameters: 1 id: 334 unit: function compareOptionsWithDefaults() file: packages/miew/src/utils.js start line: 294 end line: 311 size: 17 LOC McCabe index: 8 number of parameters: 2 id: 335 unit: Miew.prototype._pauseAnimation = function() file: packages/miew/src/Miew.js start line: 2097 end line: 2113 size: 17 LOC McCabe index: 3 number of parameters: 0 id: 336 unit: Miew.prototype.changeUnit = function() file: packages/miew/src/Miew.js start line: 2371 end line: 2394 size: 17 LOC McCabe index: 5 number of parameters: 2 id: 337 unit: Miew.prototype.applyPreset = function() file: packages/miew/src/Miew.js start line: 2510 end line: 2526 size: 17 LOC McCabe index: 5 number of parameters: 1 id: 338 unit: computeBoundaries() file: packages/miew/src/chem/Assembly.js start line: 19 end line: 37 size: 17 LOC McCabe index: 2 number of parameters: 0 id: 339 unit: _innerFinalize() file: packages/miew/src/chem/Residue.js start line: 197 end line: 215 size: 17 LOC McCabe index: 4 number of parameters: 6 id: 340 unit: normalize() file: packages/miew/src/chem/Volume.js start line: 206 end line: 226 size: 17 LOC McCabe index: 4 number of parameters: 0 id: 341 unit: remove() file: packages/miew/src/Miew-cli.js start line: 54 end line: 71 size: 17 LOC McCabe index: 6 number of parameters: 1 id: 342 unit: Miew.prototype.callNextCmd = function() file: packages/miew/src/Miew-cli.js start line: 376 end line: 393 size: 17 LOC McCabe index: 3 number of parameters: 0 id: 343 unit: getResidueColor() file: packages/miew/src/gfx/colorers/SecondaryStructureColorer.js start line: 11 end line: 27 size: 17 LOC McCabe index: 5 number of parameters: 2 id: 344 unit: _build() file: packages/miew/src/gfx/modes/groups/ResiduesSubseqGroup.js start line: 58 end line: 74 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 345 unit: const onDone = function() file: packages/miew/src/gfx/FrameInfo.js start line: 89 end line: 105 size: 17 LOC McCabe index: 4 number of parameters: 1 id: 346 unit: update() file: packages/miew/src/gfx/meshes/TextMesh.js start line: 41 end line: 58 size: 17 LOC McCabe index: 4 number of parameters: 0 id: 347 unit: buildEdgePoint() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 177 end line: 194 size: 17 LOC McCabe index: 2 number of parameters: 6 id: 348 unit: _vertexInterp() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 149 end line: 167 size: 17 LOC McCabe index: 3 number of parameters: 6 id: 349 unit: bool get_sphere_point() file: packages/miew/src/gfx/shaders/Uber.frag start line: 148 end line: 172 size: 17 LOC McCabe index: 1 number of parameters: 3 id: 350 unit: void RE_Direct_BlinnPhong() file: packages/miew/src/gfx/shaders/Uber.frag start line: 434 end line: 452 size: 17 LOC McCabe index: 3 number of parameters: 5 id: 351 unit: THREE.Matrix4.prototype.applyToPointsArray = function() file: packages/miew/src/gfx/gfxutils.js start line: 83 end line: 101 size: 17 LOC McCabe index: 6 number of parameters: 3 id: 352 unit: ObjectControls.prototype.mousewheel = function() file: packages/miew/src/ui/ObjectControls.js start line: 688 end line: 708 size: 16 LOC McCabe index: 7 number of parameters: 1 id: 353 unit: ObjectControls.prototype.keydownup = function() file: packages/miew/src/ui/ObjectControls.js start line: 791 end line: 807 size: 16 LOC McCabe index: 7 number of parameters: 1 id: 354 unit: getSelectionCenter() file: packages/miew/src/ComplexVisual.js start line: 552 end line: 568 size: 16 LOC McCabe index: 3 number of parameters: 3 id: 355 unit: within() file: packages/miew/src/ComplexVisual.js start line: 851 end line: 875 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 356 unit: constructor() file: packages/miew/src/io/parsers/VolumeModel.js start line: 17 end line: 32 size: 16 LOC McCabe index: 1 number of parameters: 0 id: 357 unit: _rebuidBondIndexes() file: packages/miew/src/io/parsers/CMLParser.js start line: 38 end line: 55 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 358 unit: _materials() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 240 end line: 255 size: 16 LOC McCabe index: 2 number of parameters: 0 id: 359 unit: _colorLayer() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 362 end line: 379 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 360 unit: _Remark290() file: packages/miew/src/io/exporters/PDBExporter.js start line: 214 end line: 230 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 361 unit: Miew.prototype._checkVolumeRenderingSupport = function() file: packages/miew/src/Miew.js start line: 1478 end line: 1495 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 362 unit: Miew.prototype.info = function() file: packages/miew/src/Miew.js start line: 3353 end line: 3368 size: 16 LOC McCabe index: 6 number of parameters: 1 id: 363 unit: _testBridge() file: packages/miew/src/chem/SecondaryStructureMap.js start line: 444 end line: 461 size: 16 LOC McCabe index: 9 number of parameters: 4 id: 364 unit: forEachLevelOne() file: packages/miew/src/chem/Bond.js start line: 62 end line: 77 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 365 unit: markAtoms() file: packages/miew/src/chem/Complex.js start line: 627 end line: 644 size: 16 LOC McCabe index: 2 number of parameters: 2 id: 366 unit: _addPair() file: packages/miew/src/chem/AutoBond.js start line: 142 end line: 157 size: 16 LOC McCabe index: 6 number of parameters: 2 id: 367 unit: constructor() file: packages/miew/src/chem/selectors/selectArgs.js start line: 91 end line: 108 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 368 unit: constructor() file: packages/miew/src/chem/VoxelWorld.js start line: 69 end line: 89 size: 16 LOC McCabe index: 2 number of parameters: 2 id: 369 unit: function keyRemap() file: packages/miew/src/Miew-cli.js start line: 81 end line: 96 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 370 unit: updateMoleculeScale() file: packages/miew/src/gfx/vr/WebVRPoC.js start line: 210 end line: 227 size: 16 LOC McCabe index: 4 number of parameters: 0 id: 371 unit: getResidueColor() file: packages/miew/src/gfx/colorers/TemperatureColorer.js start line: 32 end line: 47 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 372 unit: updateToFrame() file: packages/miew/src/gfx/modes/groups/AtomsSphereGroup.js start line: 22 end line: 39 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 373 unit: raycast() file: packages/miew/src/gfx/modes/groups/NucleicItemGroup.js start line: 4 end line: 20 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 374 unit: raycast() file: packages/miew/src/gfx/modes/groups/AtomsGroup.js start line: 4 end line: 20 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 375 unit: raycast() file: packages/miew/src/gfx/modes/groups/ResiduesGroup.js start line: 4 end line: 20 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 376 unit: function _buildStructureInterpolator() file: packages/miew/src/gfx/modes/groups/CartoonHelper.js start line: 10 end line: 30 size: 16 LOC McCabe index: 2 number of parameters: 2 id: 377 unit: getSubset() file: packages/miew/src/gfx/modes/processors/SubseqsProcessor.js start line: 39 end line: 54 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 378 unit: getSubset() file: packages/miew/src/gfx/modes/processors/ResiduesProcessor.js start line: 37 end line: 52 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 379 unit: getSubset() file: packages/miew/src/gfx/modes/processors/BondsProcessor.js start line: 35 end line: 50 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 380 unit: getSubset() file: packages/miew/src/gfx/modes/processors/AtomsProcessor.js start line: 38 end line: 53 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 381 unit: getSubset() file: packages/miew/src/gfx/modes/processors/AromaticProcessor.js start line: 44 end line: 59 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 382 unit: setTransparency() file: packages/miew/src/gfx/CSS2DObject.js start line: 29 end line: 44 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 383 unit: reset() file: packages/miew/src/gfx/FrameInfo.js start line: 245 end line: 263 size: 16 LOC McCabe index: 2 number of parameters: 0 id: 384 unit: setItem() file: packages/miew/src/gfx/geometries/Instanced2CCylindersGeometry.js start line: 80 end line: 97 size: 16 LOC McCabe index: 2 number of parameters: 4 id: 385 unit: _remapVertices() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 385 end line: 400 size: 16 LOC McCabe index: 2 number of parameters: 3 id: 386 unit: vec4 sample3DTexture() file: packages/miew/src/gfx/shaders/Volume.frag start line: 25 end line: 44 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 387 unit: constructor() file: packages/miew/src/gfx/shaders/AOHorBlurMaterial.js start line: 10 end line: 27 size: 16 LOC McCabe index: 1 number of parameters: 0 id: 388 unit: constructor() file: packages/miew/src/gfx/shaders/FXAAMaterial.js start line: 8 end line: 26 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 389 unit: Picker.prototype.handleResize = function() file: packages/miew/src/ui/Picker.js start line: 85 end line: 100 size: 15 LOC McCabe index: 2 number of parameters: 0 id: 390 unit: Picker.prototype.touchend = function() file: packages/miew/src/ui/Picker.js start line: 209 end line: 225 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 391 unit: ObjectControls.prototype.handleResize = function() file: packages/miew/src/ui/ObjectControls.js start line: 422 end line: 437 size: 15 LOC McCabe index: 2 number of parameters: 0 id: 392 unit: getSelectedComponent() file: packages/miew/src/ComplexVisual.js start line: 532 end line: 550 size: 15 LOC McCabe index: 5 number of parameters: 0 id: 393 unit: function ensureRepList() file: packages/miew/src/options.js start line: 60 end line: 74 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 394 unit: function addReps() file: packages/miew/src/options.js start line: 314 end line: 328 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 395 unit: _getAxis() file: packages/miew/src/io/parsers/VolumeModel.js start line: 89 end line: 108 size: 15 LOC McCabe index: 1 number of parameters: 0 id: 396 unit: _toComplex() file: packages/miew/src/io/parsers/CIFParser.js start line: 172 end line: 187 size: 15 LOC McCabe index: 1 number of parameters: 1 id: 397 unit: _blockCalculate() file: packages/miew/src/io/parsers/DSN6Parser.js start line: 80 end line: 94 size: 15 LOC McCabe index: 5 number of parameters: 6 id: 398 unit: _onGroup() file: packages/miew/src/io/parsers/MMTFParser.js start line: 107 end line: 125 size: 15 LOC McCabe index: 6 number of parameters: 1 id: 399 unit: function addFunc() file: packages/miew/src/io/parsers/CMLParser.js start line: 482 end line: 496 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 400 unit: _finalize() file: packages/miew/src/io/parsers/PDBParser.js start line: 75 end line: 97 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 401 unit: function buildChainID() file: packages/miew/src/io/parsers/SDFParser.js start line: 42 end line: 58 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 402 unit: constructor() file: packages/miew/src/io/parsers/SDFParser.js start line: 61 end line: 75 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 403 unit: _parseCompound() file: packages/miew/src/io/parsers/SDFParser.js start line: 177 end line: 192 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 404 unit: constructor() file: packages/miew/src/io/parsers/GROParser.js start line: 24 end line: 50 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 405 unit: _verticesIndices() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 406 end line: 423 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 406 unit: function setSubArray() file: packages/miew/src/io/exporters/fbx/FBXModel.js start line: 29 end line: 43 size: 15 LOC McCabe index: 5 number of parameters: 5 id: 407 unit: init() file: packages/miew/src/io/exporters/fbx/FBX1CGeometry.js start line: 12 end line: 29 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 408 unit: exportSync() file: packages/miew/src/io/exporters/PDBExporter.js start line: 35 end line: 52 size: 15 LOC McCabe index: 4 number of parameters: 0 id: 409 unit: Cookies.prototype.setCookie = function() file: packages/miew/src/utils/Cookies.js start line: 56 end line: 70 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 410 unit: static unregisterFromDict() file: packages/miew/src/utils/EntityList.js start line: 90 end line: 104 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 411 unit: function _traverseComponentGroups() file: packages/miew/src/ComplexVisualEdit.js start line: 6 end line: 21 size: 15 LOC McCabe index: 5 number of parameters: 3 id: 412 unit: function wrap() file: packages/miew/src/utils.js start line: 215 end line: 229 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 413 unit: function objectsDiff() file: packages/miew/src/utils.js start line: 328 end line: 342 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 414 unit: Miew.prototype._onResize = function() file: packages/miew/src/Miew.js start line: 898 end line: 917 size: 15 LOC McCabe index: 2 number of parameters: 0 id: 415 unit: Miew.prototype._discardComponentEdit = function() file: packages/miew/src/Miew.js start line: 2702 end line: 2720 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 416 unit: Miew.prototype._applyFragmentEdit = function() file: packages/miew/src/Miew.js start line: 2755 end line: 2773 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 417 unit: Miew.prototype._discardFragmentEdit = function() file: packages/miew/src/Miew.js start line: 2775 end line: 2793 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 418 unit: function getDataURL() file: packages/miew/src/Miew.js start line: 3155 end line: 3173 size: 15 LOC McCabe index: 4 number of parameters: 0 id: 419 unit: Miew.prototype.within = function() file: packages/miew/src/Miew.js start line: 4041 end line: 4057 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 420 unit: _determineType() file: packages/miew/src/chem/Chain.js start line: 49 end line: 67 size: 15 LOC McCabe index: 4 number of parameters: 0 id: 421 unit: _areBridgesLinked() file: packages/miew/src/chem/SecondaryStructureMap.js start line: 464 end line: 481 size: 15 LOC McCabe index: 7 number of parameters: 2 id: 422 unit: _rebuildSGroupOnAtomChange() file: packages/miew/src/chem/SGroup.js start line: 43 end line: 58 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 423 unit: getVoxelWorld() file: packages/miew/src/chem/Complex.js start line: 744 end line: 759 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 424 unit: forEachAtomWithinRadius() file: packages/miew/src/chem/VoxelWorld.js start line: 309 end line: 324 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 425 unit: constructor() file: packages/miew/src/gfx/CSS2DRenderer.js start line: 11 end line: 27 size: 15 LOC McCabe index: 1 number of parameters: 0 id: 426 unit: constructor() file: packages/miew/src/gfx/modes/groups/ChemGroup.js start line: 10 end line: 24 size: 15 LOC McCabe index: 2 number of parameters: 7 id: 427 unit: function adjustColor() file: packages/miew/src/gfx/modes/groups/AtomsTextGroup.js start line: 4 end line: 20 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 428 unit: _getBaseVertices() file: packages/miew/src/gfx/VolumeBounds.js start line: 61 end line: 78 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 429 unit: function applyTransformsToMeshes() file: packages/miew/src/gfx/meshutils.js start line: 49 end line: 64 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 430 unit: _findMinMax() file: packages/miew/src/gfx/geometries/VolumeSurfaceGeometry.js start line: 27 end line: 42 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 431 unit: convertToAtomsColored() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 71 end line: 85 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 432 unit: constructor() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 89 end line: 103 size: 15 LOC McCabe index: 1 number of parameters: 0 id: 433 unit: vec4 VolRender1() file: packages/miew/src/gfx/shaders/Volume.frag start line: 221 end line: 237 size: 15 LOC McCabe index: 4 number of parameters: 4 id: 434 unit: vec3 calcLighting() file: packages/miew/src/gfx/shaders/Uber.frag start line: 458 end line: 477 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 435 unit: setUberOptions() file: packages/miew/src/gfx/shaders/UberMaterial.js start line: 340 end line: 356 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 436 unit: constructor() file: packages/miew/src/gfx/shaders/AnaglyphMaterial.js start line: 8 end line: 22 size: 15 LOC McCabe index: 1 number of parameters: 0 id: 437 unit: function _buildDistorionMesh() file: packages/miew/src/gfx/gfxutils.js start line: 285 end line: 315 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 438 unit: function applySelectionMaterial() file: packages/miew/src/gfx/gfxutils.js start line: 387 end line: 402 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 439 unit: set() file: packages/miew/src/settings.js start line: 931 end line: 945 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 440 unit: function addObject() file: packages/miew/src/options.js start line: 89 end line: 105 size: 14 LOC McCabe index: 3 number of parameters: 3 id: 441 unit: _onBond() file: packages/miew/src/io/parsers/MMTFParser.js start line: 153 end line: 166 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 442 unit: function addCurrBond() file: packages/miew/src/io/parsers/CMLParser.js start line: 301 end line: 314 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 443 unit: parse() file: packages/miew/src/io/parsers/Parser.js start line: 14 end line: 27 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 444 unit: _parseDataItem() file: packages/miew/src/io/parsers/SDFParser.js start line: 160 end line: 175 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 445 unit: _buildAssemblies() file: packages/miew/src/io/parsers/SDFParser.js start line: 209 end line: 225 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 446 unit: export() file: packages/miew/src/io/exporters/Exporter.js start line: 14 end line: 27 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 447 unit: _normalLayer() file: packages/miew/src/io/exporters/fbx/FBXResult.js start line: 386 end line: 400 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 448 unit: setPositions() file: packages/miew/src/io/exporters/fbx/FBXModel.js 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constructor() file: packages/miew/src/gfx/gfxutils.js start line: 104 end line: 114 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 648 unit: THREE.StereoCamera.prototype.updateHalfSized = function() file: packages/miew/src/gfx/gfxutils.js start line: 160 end line: 173 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 649 unit: def process_request() file: packages/miew/tools/fetch.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 650 unit: ObjectControls.prototype.convertMouseToViewport = function() file: packages/miew/src/ui/ObjectControls.js start line: 482 end line: 492 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 651 unit: update() file: packages/miew/src/Timer.js start line: 28 end line: 38 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 652 unit: repHide() file: packages/miew/src/ComplexVisual.js start line: 332 end line: 344 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 653 unit: 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forEachAtomWithinDistFromMasked() file: packages/miew/src/chem/VoxelWorld.js start line: 334 end line: 342 size: 9 LOC McCabe index: 2 number of parameters: 4 id: 758 unit: forEachAtomWithinDistFromSelected() file: packages/miew/src/chem/VoxelWorld.js start line: 352 end line: 360 size: 9 LOC McCabe index: 2 number of parameters: 4 id: 759 unit: listSelector() file: packages/miew/src/Miew-cli.js start line: 139 end line: 149 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 760 unit: _createControllerMesh() file: packages/miew/src/gfx/vr/WebVRPoC.js start line: 199 end line: 208 size: 9 LOC McCabe index: 1 number of parameters: 0 id: 761 unit: button.onclick = function() file: packages/miew/src/gfx/vr/createWebVRButton.js start line: 34 end line: 49 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 762 unit: function scaleColor() file: packages/miew/src/gfx/colorers/CarbonColorer.js start line: 4 end line: 12 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 763 unit: _processItem() file: packages/miew/src/gfx/modes/groups/NucleicSpheresGroup.js start line: 8 end line: 16 size: 9 LOC McCabe index: 1 number of parameters: 5 id: 764 unit: constructor() file: packages/miew/src/gfx/modes/SurfaceMode.js start line: 14 end line: 22 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 765 unit: constructor() file: packages/miew/src/gfx/VolumeFarPlane.js start line: 12 end line: 51 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 766 unit: function createDerivativeMesh() file: packages/miew/src/gfx/meshutils.js start line: 26 end line: 35 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 767 unit: _onBeforeRender() file: packages/miew/src/gfx/meshes/ThickLineMesh.js start line: 8 end line: 17 size: 9 LOC McCabe index: 2 number of parameters: 6 id: 768 unit: constructor() file: packages/miew/src/gfx/meshes/TextMesh.js start line: 7 end line: 16 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 769 unit: _update() file: packages/miew/src/gfx/meshes/UberObject.js start line: 18 end line: 27 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 770 unit: computeBoundingSphere() file: packages/miew/src/gfx/geometries/ChunkedLinesGeometry.js start line: 29 end line: 37 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 771 unit: computeBoundingBox() file: packages/miew/src/gfx/geometries/ChunkedLinesGeometry.js start line: 39 end line: 47 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 772 unit: uvIntersection() file: packages/miew/src/gfx/geometries/RaycastableBufferGeometry.js start line: 28 end line: 38 size: 9 LOC McCabe index: 1 number of parameters: 7 id: 773 unit: checkIntersection() file: packages/miew/src/gfx/geometries/RaycastableBufferGeometry.js start line: 40 end line: 50 size: 9 LOC McCabe index: 2 number of parameters: 7 id: 774 unit: getCornerCoord() file: packages/miew/src/gfx/geometries/SSIsosurfaceGeometry.js start line: 155 end line: 164 size: 9 LOC McCabe index: 1 number of parameters: 7 id: 775 unit: _remapIndices() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 375 end line: 383 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 776 unit: toMesh() file: packages/miew/src/gfx/geometries/IsoSurface.js start line: 624 end line: 632 size: 9 LOC McCabe index: 1 number of parameters: 0 id: 777 unit: constructor() file: packages/miew/src/gfx/geometries/ExtrudedObjectsGeometry.js start line: 53 end line: 62 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 778 unit: function singleAtomObscures() file: packages/miew/src/gfx/geometries/ContactSurface.js start line: 292 end line: 301 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 779 unit: raycast() file: packages/miew/src/gfx/geometries/SphereCollisionGeo.js start line: 38 end line: 47 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 780 unit: setOpacity() file: packages/miew/src/gfx/geometries/ChunkedObjectsGeometry.js start line: 56 end line: 64 size: 9 LOC 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parameters: 0 id: 787 unit: show() file: packages/miew/src/gfx/Representation.js start line: 190 end line: 198 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 788 unit: function _calcChunkMatrix() file: packages/miew/src/gfx/gfxutils.js start line: 263 end line: 273 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 789 unit: function _groupHasGeometryToRender() file: packages/miew/src/gfx/gfxutils.js start line: 275 end line: 283 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 790 unit: function removeChildren() file: packages/miew/src/gfx/gfxutils.js start line: 340 end line: 348 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 791 unit: function lookupAndCreate() file: packages/miew/src/ComplexVisual.js start line: 19 end line: 26 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 792 unit: repCurrent() file: packages/miew/src/ComplexVisual.js start line: 138 end line: 145 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 793 unit: 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topState() file: packages/miew/src/utils/SelectionParser.js start line: 588 end line: 595 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 819 unit: function _chunkString() file: packages/miew/src/utils/Cookies.js start line: 7 end line: 14 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 820 unit: get() file: packages/miew/src/utils/EntityList.js start line: 177 end line: 184 size: 8 LOC McCabe index: 6 number of parameters: 2 id: 821 unit: function makeContextDependent() file: packages/miew/src/utils/makeContextDependent.js start line: 4 end line: 17 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 822 unit: function generateRegExp() file: packages/miew/src/utils.js start line: 103 end line: 113 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 823 unit: function bytesToBase64() file: packages/miew/src/utils.js start line: 267 end line: 274 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 824 unit: function bytesFromBase64() file: 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file: packages/miew/src/io/parsers/PubChemParser.js start line: 9 end line: 12 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1228 unit: parseSync() file: packages/miew/src/io/parsers/PubChemParser.js start line: 18 end line: 21 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1229 unit: function getFirstByte() file: packages/miew/src/io/parsers/MMTFParser.js start line: 77 end line: 80 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1230 unit: constructor() file: packages/miew/src/io/parsers/MMTFParser.js start line: 83 end line: 86 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1231 unit: _packLabel() file: packages/miew/src/io/parsers/CMLParser.js start line: 379 end line: 382 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1232 unit: function nameToElement() file: packages/miew/src/io/parsers/PDBParser.js start line: 21 end line: 35 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1233 unit: getModel() file: 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Cookies.prototype._getSimpleCookie = function() file: packages/miew/src/utils/Cookies.js start line: 111 end line: 114 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1246 unit: constructor() file: packages/miew/src/utils/JobHandle.js start line: 4 end line: 7 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1247 unit: cancel() file: packages/miew/src/utils/JobHandle.js start line: 9 end line: 12 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1248 unit: function encodeQueryComponent() file: packages/miew/src/utils.js start line: 27 end line: 30 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1249 unit: function hexColor() file: packages/miew/src/utils.js start line: 197 end line: 200 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1250 unit: function enquoteString() file: packages/miew/src/utils.js start line: 358 end line: 361 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1251 unit: function updateFogRange() file: packages/miew/src/Miew.js start line: 67 end line: 70 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1252 unit: function isAOSupported() file: packages/miew/src/Miew.js start line: 414 end line: 417 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1253 unit: Miew.prototype.enableHotKeys = function() file: packages/miew/src/Miew.js start line: 889 end line: 892 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1254 unit: onError() file: packages/miew/src/Miew.js start line: 2079 end line: 2082 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1255 unit: Miew.prototype._setReps = function() file: packages/miew/src/Miew.js start line: 2501 end line: 2504 size: 4 LOC McCabe index: 4 number of parameters: 1 id: 1256 unit: Miew.prototype.repCount = function() file: packages/miew/src/Miew.js start line: 2545 end line: 2548 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1257 unit: Miew.prototype.repGet = function() file: packages/miew/src/Miew.js start line: 2594 end line: 2597 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 1258 unit: function _updateSelection() file: packages/miew/src/Miew.js start line: 2834 end line: 2837 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1259 unit: Miew.prototype.screenshotSave = function() file: packages/miew/src/Miew.js start line: 3226 end line: 3229 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1260 unit: function _cosBetween() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 48 end line: 51 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1261 unit: constructor() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 58 end line: 61 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1262 unit: function _checkCycleComplex() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 112 end line: 115 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1263 unit: _resetCycles() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 131 end line: 134 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1264 unit: function defineOperator() file: packages/miew/src/chem/selectors.js start line: 122 end line: 125 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1265 unit: function byResidueTypeFlag() file: packages/miew/src/chem/selectors.js start line: 148 end line: 154 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1266 unit: constructor() file: packages/miew/src/chem/SecondaryStructureMap.js start line: 29 end line: 32 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1267 unit: _isHelixStart() file: packages/miew/src/chem/SecondaryStructureMap.js start line: 198 end line: 201 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 1268 unit: addResidueType() file: packages/miew/src/chem/Complex.js start line: 109 end line: 112 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1269 unit: resetCurrentUnit() file: packages/miew/src/chem/Complex.js start line: 409 end line: 412 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1270 unit: function processAtom() file: packages/miew/src/chem/Complex.js start line: 798 end line: 801 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1271 unit: function processChain() file: packages/miew/src/chem/Complex.js start line: 811 end line: 814 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1272 unit: function processComponent() file: packages/miew/src/chem/Complex.js start line: 816 end line: 819 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1273 unit: destroy() file: packages/miew/src/chem/AtomPairs.js start line: 28 end line: 31 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1274 unit: _finalize2() file: packages/miew/src/chem/Residue.js start line: 217 end line: 220 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1275 unit: addStrand() file: packages/miew/src/chem/Sheet.js start line: 29 end line: 32 size: 4 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parameters: 2 id: 1282 unit: toString() file: packages/miew/src/chem/selectors/selectArgs.js start line: 14 end line: 17 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 1283 unit: append() file: packages/miew/src/chem/selectors/selectArgs.js start line: 130 end line: 133 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1284 unit: remove() file: packages/miew/src/chem/selectors/selectArgs.js start line: 135 end line: 138 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1285 unit: constructor() file: packages/miew/src/Miew-cli.js start line: 29 end line: 32 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1286 unit: clear() file: packages/miew/src/Miew-cli.js start line: 73 end line: 76 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1287 unit: function Arg() file: packages/miew/src/Miew-cli.js start line: 319 end line: 322 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1288 unit: getCanvas() file: packages/miew/src/gfx/vr/WebVRPoC.js start line: 254 end line: 257 size: 4 LOC McCabe index: 3 number of parameters: 0 id: 1289 unit: getAtomColor() file: packages/miew/src/gfx/colorers/OccupancyColorer.js start line: 26 end line: 29 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1290 unit: getResidueColor() file: packages/miew/src/gfx/colorers/OccupancyColorer.js start line: 31 end line: 34 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1291 unit: function colorAsHex() file: packages/miew/src/gfx/CSS2DRenderer.js start line: 58 end line: 61 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1292 unit: constructor() file: packages/miew/src/gfx/modes/IsoSurfaceMode.js start line: 4 end line: 7 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1293 unit: constructor() file: packages/miew/src/gfx/modes/CartoonMode.js start line: 7 end line: 11 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1294 unit: function _slerp() file: packages/miew/src/gfx/modes/groups/AromaticGroup.js start line: 4 end line: 7 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 1295 unit: _makeGeoArgs() file: packages/miew/src/gfx/modes/groups/AromaticLinesGroup.js start line: 19 end line: 22 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1296 unit: static AtomsSpheres() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 12 end line: 16 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1297 unit: static OrphanedAtomsCrosses() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 18 end line: 22 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1298 unit: static BondsCylinders() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 24 end line: 28 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1299 unit: static BondsLines() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 30 end line: 34 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1300 unit: static CartoonChains() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 36 end line: 40 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1301 unit: static TraceChains() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 42 end line: 46 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1302 unit: static NucleicSpheres() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 48 end line: 52 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1303 unit: static NucleicCylinders() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 54 end line: 58 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1304 unit: static ALoopsTorus() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 60 end line: 64 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1305 unit: static ALoopsLines() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 66 end line: 70 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1306 unit: static QuickSurfGeo() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 72 end line: 76 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1307 unit: static ContactSurfaceGeo() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 78 end line: 82 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1308 unit: static SASSESSurfaceGeo() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 84 end line: 88 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1309 unit: static TextLabelsGeo() file: packages/miew/src/gfx/modes/groups/GroupsFactory.js start line: 90 end line: 94 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1310 unit: function wrapper() file: packages/miew/src/gfx/modes/groups/ChemGroup.js start line: 4 end line: 7 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1311 unit: enableSubset() file: packages/miew/src/gfx/modes/groups/ChemGroup.js start line: 54 end line: 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parameters: 2 id: 1507 unit: function _anotherAtom() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 44 end line: 46 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 1508 unit: function _markAromatic() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1509 unit: function _isAromatic() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 95 end line: 97 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1510 unit: function _checkCycleSimple() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 108 end line: 110 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1511 unit: markCycles() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 242 end line: 244 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1512 unit: detectCycles() file: packages/miew/src/chem/AromaticLoopsMarker.js start line: 246 end line: 248 size: 3 LOC McCabe 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getAtomColor() file: packages/miew/src/gfx/colorers/ChainColorer.js start line: 6 end line: 8 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1635 unit: getResidueColor() file: packages/miew/src/gfx/colorers/ChainColorer.js start line: 10 end line: 12 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1636 unit: getAtomColor() file: packages/miew/src/gfx/colorers/SequenceColorer.js start line: 6 end line: 8 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1637 unit: getAtomColor() file: packages/miew/src/gfx/colorers/MoleculeColorer.js start line: 6 end line: 8 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1638 unit: getElement() file: packages/miew/src/gfx/CSS2DRenderer.js start line: 29 end line: 31 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1639 unit: calcStickRadius() file: packages/miew/src/gfx/modes/TraceMode.js start line: 6 end line: 8 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1640 unit: calcAtomRadius() file: 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unpackRGBAToDepth() file: packages/miew/src/gfx/shaders/Uber.frag start line: 285 end line: 287 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1748 unit: float texture2DCompare() file: packages/miew/src/gfx/shaders/Uber.frag start line: 334 end line: 336 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 1749 unit: vec3 BRDF_Diffuse_Lambert() file: packages/miew/src/gfx/shaders/Uber.frag start line: 401 end line: 403 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1750 unit: float G_BlinnPhong_Implicit() file: packages/miew/src/gfx/shaders/Uber.frag start line: 413 end line: 416 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1751 unit: float D_BlinnPhong() file: packages/miew/src/gfx/shaders/Uber.frag start line: 418 end line: 420 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1752 unit: void RE_IndirectDiffuse_BlinnPhong() file: packages/miew/src/gfx/shaders/Uber.frag start line: 454 end line: 456 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 1753 unit: void main() file: packages/miew/src/gfx/shaders/VolumeFaces.frag start line: 3 end line: 5 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1754 unit: vec4 FxaaTexTopAlpha() file: packages/miew/src/gfx/shaders/FXAA.frag start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1755 unit: setMode() file: packages/miew/src/gfx/Representation.js start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1756 unit: init() file: packages/miew/src/gfx/capabilities.js start line: 9 end line: 11 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1757 unit: update() file: packages/miew/src/gfx/Stats.js start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1758 unit: THREE.PerspectiveCamera.prototype.setDistanceToFit = function() file: packages/miew/src/gfx/gfxutils.js start line: 179 end line: 181 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1759 unit: function clamp() file: packages/miew/src/gfx/palettes/Palette.js start line: 3 end line: 5 size: 3 LOC McCabe index: 3 number of parameters: 3 id: 1760 unit: getDataSource() file: packages/miew/src/Visual.js start line: 22 end line: 24 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1761 unit: getBoundaries() file: packages/miew/src/Visual.js start line: 26 end line: 28 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1762 unit: get() file: packages/miew/src/settings.js start line: 947 end line: 949 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1763 unit: def format_color_entry() file: packages/miew/tools/atom_types.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 1764 unit: def format_entry() file: packages/miew/tools/residue_types.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 1765 unit: def format_color_entry() file: packages/miew/tools/residue_types.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 1766 unit: _onModel() file: packages/miew/src/io/parsers/MMTFParser.js start line: 94 end line: 95 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 1767 unit: function ComplexEditor() file: packages/miew/src/ComplexVisualEdit.js start line: 23 end line: 24 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1768 unit: finalize() file: packages/miew/src/chem/BiologicalUnit.js start line: 74 end line: 75 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1769 unit: function doNothing() file: packages/miew/src/chem/Complex.js start line: 824 end line: 825 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1770 unit: function None() file: packages/miew/src/Miew-cli.js start line: 18 end line: 19 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1771 unit: initMaterial() file: packages/miew/src/gfx/meshes/MeshCreator.js start line: 134 end line: 135 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1772 unit: _onBeforeRender() file: packages/miew/src/gfx/meshes/UberObject.js start line: 15 end line: 16 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1773 unit: class CrossGeometry extends SphereCollisionGeo() file: packages/miew/src/gfx/geometries/CrossGeometry.js start line: 17 end line: 37 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 1774 unit: setOpacity() file: packages/miew/src/gfx/geometries/IsoSurfaceGeometry.js start line: 51 end line: 53 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1775 unit: raycast() file: packages/miew/src/gfx/geometries/IsoSurfaceGeometry.js start line: 55 end line: 56 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1776 unit: raycast() file: packages/miew/src/gfx/geometries/LabelsGeometry.js start line: 100 end line: 101 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1777 unit: setOpacity() file: packages/miew/src/gfx/geometries/LabelsGeometry.js start line: 103 end line: 105 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 1778 unit: class SimpleSpheresGeometry extends SphereCollisionGeo() file: packages/miew/src/gfx/geometries/SimpleSpheresGeometry.js start line: 8 end line: 46 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 1779 unit: class InstancedSpheresGeometry extends SphereCollisionGeo() file: packages/miew/src/gfx/geometries/InstancedSpheresGeometry.js start line: 24 end line: 88 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 1780 unit: uniforms: overrideUniforms() file: packages/miew/src/gfx/shaders/VolumeMaterial.js start line: 45 end line: 45 size: 1 LOC McCabe index: 1 number of parameters: 2