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LOC McCabe index: 284 number of parameters: 5 id: 8 unit: void SeekerUpdate() file: layer3/Seeker.cpp start line: 1186 end line: 2171 size: 843 LOC McCabe index: 210 number of parameters: 1 id: 9 unit: void RayRenderCOLLADA() file: layer1/COLLADA.cpp start line: 667 end line: 1920 size: 842 LOC McCabe index: 100 number of parameters: 7 id: 10 unit: def get_menudata() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 834 LOC McCabe index: 55 number of parameters: 2 id: 11 unit: static int SceneClick() file: layer1/Scene.cpp start line: 3505 end line: 4384 size: 817 LOC McCabe index: 233 number of parameters: 6 id: 12 unit: int RayAntiThread() file: layer1/Ray.cpp start line: 4631 end line: 5522 size: 811 LOC McCabe index: 12 number of parameters: 1 id: 13 unit: static int SceneDrag() file: layer1/Scene.cpp start line: 4832 end line: 5660 size: 712 LOC McCabe index: 168 number of parameters: 5 id: 14 unit: int ChampParseAtomBlock() file: contrib/champ/champ.c start line: 2867 end line: 3574 size: 699 LOC McCabe index: 161 number of parameters: 3 id: 15 unit: float SculptIterateObject() file: layer2/Sculpt.cpp start line: 1642 end line: 2426 size: 699 LOC McCabe index: 151 number of parameters: 5 id: 16 unit: static int TetsurfFindActiveBoxes() file: layer0/Tetsurf.cpp start line: 759 end line: 1495 size: 654 LOC McCabe index: 164 number of parameters: 10 id: 17 unit: static void RepSurfaceRender() file: layer2/RepSurface.cpp start line: 1426 end line: 2139 size: 637 LOC McCabe index: 161 number of parameters: 2 id: 18 unit: void RepSurfaceColor() file: layer2/RepSurface.cpp start line: 2189 end line: 2872 size: 614 LOC McCabe index: 154 number of parameters: 2 id: 19 unit: int BasisMakeMap() file: layer1/Basis.cpp start line: 2854 end line: 3599 size: 610 LOC McCabe index: 152 number of parameters: 10 id: 20 unit: bool SceneRay() file: layer1/SceneRay.cpp start line: 83 end line: 741 size: 578 LOC McCabe index: 115 number of parameters: 12 id: 21 unit: static void assign_pdb_known_residue() file: layer2/ObjectMolecule2.cpp start line: 855 end line: 1424 size: 552 LOC McCabe index: 457 number of parameters: 4 id: 22 unit: static int hqr2_() file: layer0/Matrix.cpp start line: 3083 end line: 3982 size: 513 LOC McCabe index: 74 number of parameters: 9 id: 23 unit: int ChampMatch2() file: contrib/champ/champ.c start line: 2134 end line: 2769 size: 511 LOC McCabe index: 90 number of parameters: 8 id: 24 unit: static int read_js_structure() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 410 end line: 1002 size: 483 LOC McCabe index: 125 number of parameters: 3 id: 25 unit: int TrackerUnitTest() file: layer0/Tracker.cpp start line: 935 end line: 1505 size: 450 LOC McCabe index: 130 number of parameters: 1 id: 26 unit: int BasisHitShadow() file: layer1/Basis.cpp start line: 2351 end line: 2851 size: 428 LOC McCabe index: 119 number of parameters: 1 id: 27 unit: int BasisHitPerspective() file: layer1/Basis.cpp start line: 1530 end line: 2022 size: 415 LOC McCabe index: 110 number of parameters: 1 id: 28 unit: void OrthoDoDraw() file: layer1/Ortho.cpp start line: 1489 end line: 1956 size: 413 LOC McCabe index: 79 number of parameters: 2 id: 29 unit: void CSeq::draw() file: layer1/Seq.cpp start line: 294 end line: 734 size: 406 LOC McCabe index: 88 number of parameters: 1 id: 30 unit: def ss() file: modules/pymol/util.py start line: 0 end line: 0 size: 398 LOC McCabe index: 98 number of parameters: 2 id: 31 unit: int ReadPARM::readparm() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 287 end line: 873 size: 394 LOC McCabe index: 68 number of parameters: 1 id: 32 unit: void ChampCountRings() file: contrib/champ/champ.c start line: 489 end line: 1018 size: 392 LOC McCabe index: 78 number of parameters: 2 id: 33 unit: int ViewElemInterpolate() file: layer1/View.cpp start line: 805 end line: 1291 size: 376 LOC McCabe index: 94 number of parameters: 9 id: 34 unit: int ChampSmiToPat() file: contrib/champ/champ.c start line: 4742 end line: 5131 size: 376 LOC McCabe index: 84 number of parameters: 2 id: 35 unit: void AtomInfoAssignParameters() file: layer2/AtomInfo.cpp start line: 2409 end line: 2794 size: 370 LOC McCabe index: 161 number of parameters: 2 id: 36 unit: static void RepLabelRenderRayBackground() file: layer2/RepLabel.cpp start line: 705 end line: 1107 size: 365 LOC McCabe index: 72 number of parameters: 4 id: 37 unit: float AtomInfoGetBondLength() file: layer2/AtomInfo.cpp start line: 1373 end line: 1757 size: 357 LOC McCabe index: 91 number of parameters: 3 id: 38 unit: static int ObjectMapGRDStrToMap() file: layer2/ObjectMap.cpp start line: 4170 end line: 4633 size: 352 LOC McCabe index: 71 number of parameters: 5 id: 39 unit: float MatrixFitRMSTTTf() file: layer0/Matrix.cpp start line: 1033 end line: 1500 size: 343 LOC McCabe index: 68 number of parameters: 6 id: 40 unit: void hqr2() file: modules/cealign/src/tnt/tnt_linalg.h start line: 667 end line: 1105 size: 339 LOC McCabe index: 71 number of parameters: 0 id: 41 unit: void hqr2() file: modules/cealign/src/tnt/jama_eig.h start line: 456 end line: 894 size: 339 LOC McCabe index: 71 number of parameters: 0 id: 42 unit: void CPopUp::draw() file: layer4/PopUp.cpp start line: 601 end line: 969 size: 337 LOC McCabe index: 34 number of parameters: 1 id: 43 unit: static int ObjectMapBRIXStrToMap() file: layer2/ObjectMap.cpp start line: 3767 end line: 4166 size: 336 LOC McCabe index: 84 number of parameters: 5 id: 44 unit: static int ObjectMapCCP4StrToMap() file: layer2/ObjectMap.cpp start line: 2381 end line: 2809 size: 335 LOC McCabe index: 58 number of parameters: 5 id: 45 unit: static int IsosurfGradients() file: layer0/Isosurf.cpp start line: 1075 end line: 1528 size: 331 LOC McCabe index: 71 number of parameters: 8 id: 46 unit: static void ObjectSliceStateUpdate() file: layer2/ObjectSlice.cpp start line: 266 end line: 663 size: 331 LOC McCabe index: 84 number of parameters: 3 id: 47 unit: static void RepLabelRender() file: layer2/RepLabel.cpp start line: 1172 end line: 1503 size: 314 LOC McCabe index: 62 number of parameters: 2 id: 48 unit: void RayRenderVRML2() file: layer1/Ray.cpp start line: 1251 end line: 1640 size: 309 LOC McCabe index: 30 number of parameters: 9 id: 49 unit: void AtomInfoGetPDB3LetHydroName() file: layer2/AtomInfo.cpp start line: 200 end line: 507 size: 307 LOC McCabe index: 142 number of parameters: 4 id: 50 unit: int ChampModelToPat() file: contrib/champ/champ.c start line: 1335 end line: 1666 size: 305 LOC McCabe index: 79 number of parameters: 2 id: 51 unit: def __init__() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 302 LOC McCabe index: 19 number of parameters: 2 id: 52 unit: def get_command_keywords() file: modules/pymol/keywords.py start line: 0 end line: 0 size: 302 LOC McCabe index: 3 number of parameters: 1 id: 53 unit: static void ObjectSliceRender() file: layer2/ObjectSlice.cpp start line: 945 end line: 1278 size: 301 LOC McCabe index: 73 number of parameters: 2 id: 54 unit: int ObjectAlignmentAsStrVLA() file: layer2/ObjectAlignment.cpp start line: 155 end line: 477 size: 297 LOC McCabe index: 67 number of parameters: 5 id: 55 unit: void SceneRender() file: layer1/SceneRender.cpp start line: 160 end line: 528 size: 294 LOC McCabe index: 75 number of parameters: 9 id: 56 unit: void CControl::draw() file: layer1/Control.cpp start line: 547 end line: 861 size: 293 LOC McCabe index: 32 number of parameters: 1 id: 57 unit: int ObjectMotion() file: layer1/PyMOLObject.cpp start line: 231 end line: 549 size: 293 LOC McCabe index: 97 number of parameters: 14 id: 58 unit: int ExtrudeCGOSurfaceStrand() file: layer1/Extrude.cpp start line: 1712 end line: 2039 size: 292 LOC McCabe index: 82 number of parameters: 4 id: 59 unit: int ExtrudeCGOSurfaceTube() file: layer1/Extrude.cpp start line: 733 end line: 1060 size: 290 LOC McCabe index: 66 number of parameters: 6 id: 60 unit: void PSetupEmbedded() file: layer1/P.cpp start line: 1634 end line: 2016 size: 290 LOC McCabe index: 48 number of parameters: 3 id: 61 unit: int ObjectMoleculeConnect() file: layer2/ObjectMolecule2.cpp start line: 4064 end line: 4409 size: 287 LOC McCabe index: 89 number of parameters: 7 id: 62 unit: int SceneDrawImageOverlay() file: layer1/Scene.cpp start line: 2910 end line: 3232 size: 283 LOC McCabe index: 67 number of parameters: 2 id: 63 unit: static int read_rawgraphics() file: contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp start line: 103 end line: 483 size: 281 LOC McCabe index: 65 number of parameters: 3 id: 64 unit: static OVstatus PyMOL_InitAPI() file: layer5/PyMOL.cpp start line: 265 end line: 600 size: 277 LOC McCabe index: 35 number of parameters: 1 id: 65 unit: static int ObjectMapFLDStrToMap() file: layer2/ObjectMap.cpp start line: 3433 end line: 3763 size: 275 LOC McCabe index: 84 number of parameters: 5 id: 66 unit: def parse_args() file: modules/pymol/invocation.py start line: 0 end line: 0 size: 275 LOC McCabe index: 77 number of parameters: 4 id: 67 unit: static int write_js_structure() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1353 end line: 1732 size: 272 LOC McCabe index: 58 number of parameters: 3 id: 68 unit: int BasisHitOrthoscopic() file: layer1/Basis.cpp start line: 2027 end line: 2346 size: 271 LOC McCabe index: 75 number of parameters: 1 id: 69 unit: void RayRenderPOV() file: layer1/Ray.cpp start line: 2544 end line: 2853 size: 270 LOC McCabe index: 38 number of parameters: 10 id: 70 unit: def _parse() file: modules/pymol/parser.py start line: 0 end line: 0 size: 268 LOC McCabe index: 90 number of parameters: 3 id: 71 unit: int MovieView() file: layer1/Movie.cpp start line: 1157 end line: 1446 size: 265 LOC McCabe index: 92 number of parameters: 16 id: 72 unit: void SceneRovingUpdate() file: layer1/Scene.cpp start line: 4541 end line: 4828 size: 260 LOC McCabe index: 45 number of parameters: 1 id: 73 unit: static int vtf_parse_atom() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 371 end line: 654 size: 252 LOC McCabe index: 47 number of parameters: 2 id: 74 unit: def simple_unknowns() file: modules/chempy/place.py start line: 0 end line: 0 size: 251 LOC McCabe index: 39 number of parameters: 2 id: 75 unit: static int hqr_() file: layer0/Matrix.cpp start line: 2612 end line: 3081 size: 245 LOC McCabe index: 34 number of parameters: 8 id: 76 unit: static int parseStructureFaster() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 483 end line: 776 size: 242 LOC McCabe index: 53 number of parameters: 3 id: 77 unit: static int SceneMakeSizedImage() file: layer1/Scene.cpp start line: 1402 end line: 1686 size: 240 LOC McCabe index: 55 number of parameters: 4 id: 78 unit: void EditorPrepareDrag() file: layer3/Editor.cpp start line: 1820 end line: 2094 size: 238 LOC McCabe index: 55 number of parameters: 6 id: 79 unit: static void draw_globe() file: layer3/Editor.cpp start line: 1264 end line: 1514 size: 235 LOC McCabe index: 25 number of parameters: 4 id: 80 unit: def do_library() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 235 LOC McCabe index: 69 number of parameters: 1 id: 81 unit: def props_dialog() file: modules/pmg_qt/properties_dialog.py start line: 0 end line: 0 size: 234 LOC McCabe index: 46 number of parameters: 1 id: 82 unit: void EditorDrag() file: layer3/Editor.cpp start line: 2105 end line: 2354 size: 230 LOC McCabe index: 65 number of parameters: 8 id: 83 unit: int GenerateRepCartoonProcessCylindricalHelices() file: layer2/RepCartoon.cpp start line: 1641 end line: 1890 size: 228 LOC McCabe index: 39 number of parameters: 17 id: 84 unit: static int get_wavefunction() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 3567 end line: 3909 size: 225 LOC McCabe index: 53 number of parameters: 3 id: 85 unit: void RepCartoonGeneratePASS1() file: layer2/RepCartoon.cpp start line: 2824 end line: 3120 size: 225 LOC McCabe index: 84 number of parameters: 5 id: 86 unit: static int SurfaceJobRun() file: layer2/RepSurface.cpp start line: 3570 end line: 3819 size: 225 LOC McCabe index: 58 number of parameters: 2 id: 87 unit: static int IsosurfFindLines() file: layer0/Isosurf.cpp start line: 1792 end line: 2017 size: 224 LOC McCabe index: 59 number of parameters: 1 id: 88 unit: int ExtrudeCGOSurfaceVariableTube() file: layer1/Extrude.cpp start line: 1100 end line: 1372 size: 223 LOC McCabe index: 28 number of parameters: 3 id: 89 unit: static int ObjectMapPHIStrToMap() file: layer2/ObjectMap.cpp start line: 2951 end line: 3234 size: 223 LOC McCabe index: 32 number of parameters: 5 id: 90 unit: def get_auto_arg_list() file: modules/pymol/completing.py start line: 0 end line: 0 size: 223 LOC McCabe index: 1 number of parameters: 1 id: 91 unit: static ov_size idtf_dump_resources() file: layer1/Ray.cpp start line: 1943 end line: 2222 size: 221 LOC McCabe index: 14 number of parameters: 5 id: 92 unit: static void RepMeshRender() file: layer2/RepMesh.cpp start line: 306 end line: 543 size: 220 LOC McCabe index: 72 number of parameters: 2 id: 93 unit: char SeekerGetAbbr() file: layer3/Seeker.cpp start line: 741 end line: 962 size: 219 LOC McCabe index: 66 number of parameters: 4 id: 94 unit: static void ObjectMapRender() file: layer2/ObjectMap.cpp start line: 1900 end line: 2145 size: 217 LOC McCabe index: 45 number of parameters: 2 id: 95 unit: static void ObjectMeshUpdate() file: layer2/ObjectMesh.cpp start line: 515 end line: 772 size: 216 LOC McCabe index: 53 number of parameters: 1 id: 96 unit: static int RepMeshCGOGenerate() file: layer2/RepMesh.cpp start line: 82 end line: 303 size: 216 LOC McCabe index: 78 number of parameters: 2 id: 97 unit: static int ConeLineToSphereCapped() file: layer1/Basis.cpp start line: 798 end line: 1074 size: 214 LOC McCabe index: 25 number of parameters: 13 id: 98 unit: static int ObjectMapDXStrToMap() file: layer2/ObjectMap.cpp start line: 4889 end line: 5146 size: 214 LOC McCabe index: 67 number of parameters: 5 id: 99 unit: static int ObjectMapStateTrim() file: layer2/ObjectMap.cpp start line: 475 end line: 715 size: 213 LOC McCabe index: 58 number of parameters: 5 id: 100 unit: int MatchAlign() file: layer0/Match.cpp start line: 379 end line: 617 size: 208 LOC McCabe index: 61 number of parameters: 8 id: 101 unit: int main() file: contrib/champ/champ.c start line: 132 end line: 369 size: 208 LOC McCabe index: 44 number of parameters: 2 id: 102 unit: static void ObjectVolumeRender() file: layer2/ObjectVolume.cpp start line: 744 end line: 1028 size: 206 LOC McCabe index: 42 number of parameters: 2 id: 103 unit: void RepLabelRenderBackgroundInImmediate() file: layer2/RepLabel.cpp start line: 449 end line: 666 size: 206 LOC McCabe index: 43 number of parameters: 17 id: 104 unit: static void RepDistDashRender() file: layer2/RepDistDash.cpp start line: 117 end line: 331 size: 204 LOC McCabe index: 70 number of parameters: 2 id: 105 unit: void RayRenderIDTF() file: layer1/Ray.cpp start line: 2226 end line: 2453 size: 203 LOC McCabe index: 39 number of parameters: 3 id: 106 unit: static int read_ccp4_data() file: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp start line: 459 end line: 672 size: 202 LOC McCabe index: 49 number of parameters: 4 id: 107 unit: static int RepValence() file: layer2/RepCylBond.cpp start line: 313 end line: 536 size: 197 LOC McCabe index: 45 number of parameters: 18 id: 108 unit: int ColorTableLoad() file: layer1/Color.cpp start line: 2498 end line: 2727 size: 196 LOC McCabe index: 49 number of parameters: 4 id: 109 unit: static int get_traj_frame() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2852 end line: 3128 size: 194 LOC McCabe index: 39 number of parameters: 3 id: 110 unit: static int read_dcdheader() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 160 end line: 422 size: 193 LOC McCabe index: 45 number of parameters: 11 id: 111 unit: int AtomInfoKnownProteinResName() file: layer2/AtomInfo.cpp start line: 613 end line: 804 size: 192 LOC McCabe index: 57 number of parameters: 1 id: 112 unit: static void launch() file: layer5/main.cpp start line: 1431 end line: 1655 size: 189 LOC McCabe index: 42 number of parameters: 2 id: 113 unit: void CoordSet::render() file: layer2/CoordSet.cpp start line: 1305 end line: 1506 size: 188 LOC McCabe index: 70 number of parameters: 1 id: 114 unit: pathCache findPath() file: modules/cealign/src/ccealignmodule.cpp start line: 156 end line: 439 size: 187 LOC McCabe index: 44 number of parameters: 10 id: 115 unit: void CButMode::draw() file: layer1/ButMode.cpp start line: 192 end line: 399 size: 182 LOC McCabe index: 35 number of parameters: 1 id: 116 unit: static int ObjectMapXPLORStrToMap() file: layer2/ObjectMap.cpp start line: 3238 end line: 3429 size: 179 LOC McCabe index: 45 number of parameters: 4 id: 117 unit: void OrthoKey() file: layer1/Ortho.cpp start line: 849 end line: 1030 size: 178 LOC McCabe index: 58 number of parameters: 5 id: 118 unit: static int TriangleFill() file: layer0/Triangle.cpp start line: 1611 end line: 1810 size: 178 LOC McCabe index: 53 number of parameters: 5 id: 119 unit: def __init__() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 178 LOC McCabe index: 37 number of parameters: 3 id: 120 unit: int ChampAtomToString() file: contrib/champ/champ.c start line: 4532 end line: 4720 size: 177 LOC McCabe index: 87 number of parameters: 3 id: 121 unit: static int analyze_traj() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 3136 end line: 3354 size: 177 LOC McCabe index: 38 number of parameters: 2 id: 122 unit: int ExtrudeCGOSurfacePolygon() file: layer1/Extrude.cpp start line: 1374 end line: 1567 size: 175 LOC McCabe index: 55 number of parameters: 4 id: 123 unit: static void MovieModalPNG() file: layer1/Movie.cpp start line: 691 end line: 875 size: 174 LOC McCabe index: 37 number of parameters: 3 id: 124 unit: int RepMeshGetSolventDots() file: layer2/RepMesh.cpp start line: 1199 end line: 1384 size: 174 LOC McCabe index: 42 number of parameters: 5 id: 125 unit: void bg_grad() file: layer1/Ortho.cpp start line: 1303 end line: 1487 size: 173 LOC McCabe index: 56 number of parameters: 1 id: 126 unit: static int read_rawgraphics() file: contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp start line: 80 end line: 297 size: 173 LOC McCabe index: 29 number of parameters: 3 id: 127 unit: static int read_rawgraphics() file: contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp start line: 76 end line: 284 size: 173 LOC McCabe index: 32 number of parameters: 3 id: 128 unit: static void ObjectGadgetRampUpdateCGO() file: layer2/ObjectGadgetRamp.cpp start line: 591 end line: 816 size: 172 LOC McCabe index: 16 number of parameters: 2 id: 129 unit: static void ObjectSurfaceUpdate() file: layer2/ObjectSurface.cpp start line: 483 end line: 684 size: 172 LOC McCabe index: 44 number of parameters: 1 id: 130 unit: int WrapperObjectAssignSubScript() file: layer1/P.cpp start line: 754 end line: 932 size: 171 LOC McCabe index: 33 number of parameters: 3 id: 131 unit: def __init__() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 170 LOC McCabe index: 12 number of parameters: 3 id: 132 unit: int TextInit() file: layer1/Text.cpp start line: 473 end line: 702 size: 168 LOC McCabe index: 22 number of parameters: 1 id: 133 unit: int TestPyMOLRun() file: layer5/TestPyMOL.cpp start line: 289 end line: 462 size: 168 LOC McCabe index: 19 number of parameters: 3 id: 134 unit: int RayExpandPrimitives() file: layer1/Ray.cpp start line: 580 end line: 756 size: 167 LOC McCabe index: 23 number of parameters: 1 id: 135 unit: static int TriangleTxfFolds() file: layer0/Triangle.cpp start line: 1812 end line: 2005 size: 166 LOC McCabe index: 37 number of parameters: 4 id: 136 unit: static int read_rawgraphics() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 262 end line: 484 size: 165 LOC McCabe index: 25 number of parameters: 3 id: 137 unit: static void ObjectMoleculePDBStr2CoordSetPASS1() file: layer2/ObjectMolecule2.cpp start line: 1644 end line: 1817 size: 165 LOC McCabe index: 64 number of parameters: 18 id: 138 unit: static int TriangleBuildObvious() file: layer0/Triangle.cpp start line: 754 end line: 965 size: 164 LOC McCabe index: 47 number of parameters: 6 id: 139 unit: static int TriangleBuildSecondPass() file: layer0/Triangle.cpp start line: 967 end line: 1137 size: 164 LOC McCabe index: 48 number of parameters: 6 id: 140 unit: int ObjectMoleculeAddPseudoatom() file: layer2/ObjectMolecule2.cpp start line: 226 end line: 410 size: 164 LOC McCabe index: 35 number of parameters: 18 id: 141 unit: static int write_psf_structure() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 766 end line: 971 size: 163 LOC McCabe index: 55 number of parameters: 3 id: 142 unit: void PrepareViewPortForStereoImpl() file: layer1/SceneRender.cpp start line: 1240 end line: 1406 size: 162 LOC McCabe index: 36 number of parameters: 11 id: 143 unit: static int balanc_() file: layer0/Matrix.cpp start line: 1695 end line: 2043 size: 161 LOC McCabe index: 27 number of parameters: 6 id: 144 unit: static int get_basis() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 761 end line: 996 size: 161 LOC McCabe index: 30 number of parameters: 1 id: 145 unit: static void MainBusyIdle() file: layer5/main.cpp start line: 1138 end line: 1349 size: 161 LOC McCabe index: 44 number of parameters: 1 id: 146 unit: def page_install_new() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 161 LOC McCabe index: 17 number of parameters: 2 id: 147 unit: static void SceneDrawButtons() file: layer1/Scene.cpp start line: 2724 end line: 2908 size: 156 LOC McCabe index: 33 number of parameters: 2 id: 148 unit: int ButModeTranslate() file: layer1/ButMode.cpp start line: 603 end line: 757 size: 155 LOC McCabe index: 49 number of parameters: 3 id: 149 unit: static int xtc_3dfcoord() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1781 end line: 1966 size: 155 LOC McCabe index: 34 number of parameters: 4 id: 150 unit: static void RepDistLabelRender() file: layer2/RepDistLabel.cpp start line: 70 end line: 232 size: 155 LOC McCabe index: 42 number of parameters: 2 id: 151 unit: def update_box() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 153 LOC McCabe index: 10 number of parameters: 1 id: 152 unit: int ExtrudeComputePuttyScaleFactors() file: layer1/Extrude.cpp start line: 2041 end line: 2208 size: 151 LOC McCabe index: 46 number of parameters: 12 id: 153 unit: static int ZLineToSphereCapped() file: layer1/Basis.cpp start line: 353 end line: 573 size: 150 LOC McCabe index: 24 number of parameters: 10 id: 154 unit: static bool readAngleBonds() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 801 end line: 979 size: 150 LOC McCabe index: 37 number of parameters: 2 id: 155 unit: int PLabelAtomAlt() file: layer1/P.cpp start line: 155 end line: 314 size: 149 LOC McCabe index: 55 number of parameters: 5 id: 156 unit: static int TriangleBuildSecondSecondPass() file: layer0/Triangle.cpp start line: 1139 end line: 1293 size: 149 LOC McCabe index: 44 number of parameters: 7 id: 157 unit: void PInit() file: layer1/P.cpp start line: 2116 end line: 2320 size: 148 LOC McCabe index: 13 number of parameters: 2 id: 158 unit: void ObjectAlignmentUpdate() file: layer2/ObjectAlignment.cpp start line: 912 end line: 1075 size: 148 LOC McCabe index: 40 number of parameters: 1 id: 159 unit: static int LineToSphereCapped() file: layer1/Basis.cpp start line: 578 end line: 796 size: 146 LOC McCabe index: 23 number of parameters: 10 id: 160 unit: def __init__() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 146 LOC McCabe index: 25 number of parameters: 2 id: 161 unit: void ViewElemDraw() file: layer1/View.cpp start line: 158 end line: 306 size: 145 LOC McCabe index: 16 number of parameters: 5 id: 162 unit: static bool readRMSDBonds() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 982 end line: 1152 size: 144 LOC McCabe index: 34 number of parameters: 2 id: 163 unit: static int read_dlpoly_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 375 end line: 557 size: 144 LOC McCabe index: 46 number of parameters: 3 id: 164 unit: int getMacroModelAtomType() file: layer2/MmodTyping.cpp start line: 15 end line: 163 size: 144 LOC McCabe index: 81 number of parameters: 1 id: 165 unit: int MatrixInvertC44f() file: layer0/Matrix.cpp start line: 472 end line: 649 size: 143 LOC McCabe index: 19 number of parameters: 2 id: 166 unit: int ObjectMapStateInterpolate() file: layer2/ObjectMap.cpp start line: 1102 end line: 1268 size: 143 LOC McCabe index: 38 number of parameters: 5 id: 167 unit: static void ObjectCGOGenerateCGO() file: layer2/ObjectCGO.cpp start line: 341 end line: 489 size: 142 LOC McCabe index: 30 number of parameters: 8 id: 168 unit: int IsosurfExpand() file: layer0/Isosurf.cpp start line: 563 end line: 734 size: 141 LOC McCabe index: 43 number of parameters: 5 id: 169 unit: static int vtf_read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 994 end line: 1166 size: 140 LOC McCabe index: 36 number of parameters: 3 id: 170 unit: static int read_rawgraphics() file: contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp start line: 95 end line: 266 size: 140 LOC McCabe index: 26 number of parameters: 3 id: 171 unit: static int IsosurfDrawPoints() file: layer0/Isosurf.cpp start line: 1532 end line: 1683 size: 139 LOC McCabe index: 29 number of parameters: 1 id: 172 unit: void SceneUpdate() file: layer1/Scene.cpp start line: 6375 end line: 6540 size: 137 LOC McCabe index: 47 number of parameters: 2 id: 173 unit: int CRay::triangle3fv() file: layer1/Ray.cpp start line: 7319 end line: 7488 size: 135 LOC McCabe index: 17 number of parameters: 9 id: 174 unit: static void RepDihedralRender() file: layer2/RepDihedral.cpp start line: 165 end line: 314 size: 135 LOC McCabe index: 36 number of parameters: 2 id: 175 unit: def get_internal_tuples() file: modules/chempy/models.py start line: 0 end line: 0 size: 135 LOC McCabe index: 52 number of parameters: 1 id: 176 unit: int PlugIOManagerLoadTraj() file: layer3/PlugIOManager.cpp start line: 151 end line: 311 size: 134 LOC McCabe index: 29 number of parameters: 14 id: 177 unit: int MyPNGWrite() file: layer0/MyPNG.cpp start line: 173 end line: 360 size: 133 LOC McCabe index: 20 number of parameters: 9 id: 178 unit: static int TriangleAdjustNormals() file: layer0/Triangle.cpp start line: 310 end line: 450 size: 133 LOC McCabe index: 19 number of parameters: 5 id: 179 unit: xx_boolean xx_matrix_jacobi_solve() file: layer0/Matrix.cpp start line: 62 end line: 206 size: 133 LOC McCabe index: 31 number of parameters: 5 id: 180 unit: int PlugIOManagerInitAll() file: contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c start line: 202 end line: 336 size: 133 LOC McCabe index: 254 number of parameters: 1 id: 181 unit: static void ObjectVolumeUpdate() file: layer2/ObjectVolume.cpp start line: 415 end line: 581 size: 133 LOC McCabe index: 35 number of parameters: 1 id: 182 unit: static int ObjectMapStateHalve() file: layer2/ObjectMap.cpp start line: 818 end line: 980 size: 133 LOC McCabe index: 23 number of parameters: 3 id: 183 unit: def do_pick() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 133 LOC McCabe index: 34 number of parameters: 2 id: 184 unit: static void TriangleBuildSingle() file: layer0/Triangle.cpp start line: 1295 end line: 1428 size: 131 LOC McCabe index: 37 number of parameters: 6 id: 185 unit: static int read_xsf_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 666 end line: 836 size: 131 LOC McCabe index: 20 number of parameters: 3 id: 186 unit: static int RepCartoonCGOGenerate() file: layer2/RepCartoon.cpp start line: 99 end line: 244 size: 131 LOC McCabe index: 32 number of parameters: 2 id: 187 unit: static int ObjectMapACNTStrToMap() file: layer2/ObjectMap.cpp start line: 5214 end line: 5382 size: 131 LOC McCabe index: 30 number of parameters: 5 id: 188 unit: static int SceneRelease() file: layer1/Scene.cpp start line: 3265 end line: 3398 size: 130 LOC McCabe index: 40 number of parameters: 6 id: 189 unit: int MapSetupExpressPerp() file: layer0/Map.cpp start line: 426 end line: 572 size: 130 LOC McCabe index: 30 number of parameters: 6 id: 190 unit: int MyPNGRead() file: layer0/MyPNG.cpp start line: 362 end line: 541 size: 130 LOC McCabe index: 34 number of parameters: 4 id: 191 unit: static int TriangleBruteForceClosure() file: layer0/Triangle.cpp start line: 2145 end line: 2278 size: 130 LOC McCabe index: 35 number of parameters: 5 id: 192 unit: static void draw_bond() file: layer3/Editor.cpp start line: 1120 end line: 1262 size: 130 LOC McCabe index: 10 number of parameters: 4 id: 193 unit: def refresh() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 130 LOC McCabe index: 7 number of parameters: 1 id: 194 unit: def parse() file: modules/chempy/cex.py start line: 0 end line: 0 size: 130 LOC McCabe index: 16 number of parameters: 2 id: 195 unit: def from_plystr() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 129 LOC McCabe index: 25 number of parameters: 3 id: 196 unit: int AtomInfoFromPyList() file: layer2/AtomInfo.cpp start line: 894 end line: 1026 size: 128 LOC McCabe index: 80 number of parameters: 3 id: 197 unit: def installPluginFromFile() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 128 LOC McCabe index: 29 number of parameters: 3 id: 198 unit: def do_pick() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 128 LOC McCabe index: 38 number of parameters: 2 id: 199 unit: void IsofieldComputeGradients() file: layer0/Isosurf.cpp start line: 220 end line: 376 size: 127 LOC McCabe index: 32 number of parameters: 2 id: 200 unit: static void SphereDumpAll() file: layer0/Sphere.cpp start line: 119 end line: 261 size: 127 LOC McCabe index: 27 number of parameters: 1 id: 201 unit: static int g96_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 735 end line: 975 size: 127 LOC McCabe index: 43 number of parameters: 2 id: 202 unit: void main() file: data/shaders/connector.gs start line: 253 end line: 387 size: 127 LOC McCabe index: 12 number of parameters: 0 id: 203 unit: static int TriangleFixProblems() file: layer0/Triangle.cpp start line: 2007 end line: 2143 size: 126 LOC McCabe index: 41 number of parameters: 4 id: 204 unit: static void TriangleAdd() file: layer0/Triangle.cpp start line: 604 end line: 752 size: 125 LOC McCabe index: 14 number of parameters: 7 id: 205 unit: int GenerateRepCartoonDrawRings() file: layer2/RepCartoon.cpp start line: 1893 end line: 2036 size: 125 LOC McCabe index: 49 number of parameters: 8 id: 206 unit: int ExtrudeCGOSurfacePolygonTaper() file: layer1/Extrude.cpp start line: 1569 end line: 1710 size: 124 LOC McCabe index: 28 number of parameters: 4 id: 207 unit: int RayTransformFirst() file: layer1/Ray.cpp start line: 841 end line: 973 size: 124 LOC McCabe index: 35 number of parameters: 3 id: 208 unit: def runPsize() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 124 LOC McCabe index: 7 number of parameters: 1 id: 209 unit: static int IsosurfFindActiveEdges() file: layer0/Isosurf.cpp start line: 2021 end line: 2144 size: 123 LOC McCabe index: 28 number of parameters: 1 id: 210 unit: def ray_shadows() file: modules/pymol/util.py start line: 0 end line: 0 size: 123 LOC McCabe index: 12 number of parameters: 2 id: 211 unit: int IsosurfVolume() file: layer0/Isosurf.cpp start line: 858 end line: 990 size: 122 LOC McCabe index: 31 number of parameters: 11 id: 212 unit: static void ChampReassignLexPri() file: contrib/champ/champ.c start line: 3792 end line: 3940 size: 121 LOC McCabe index: 27 number of parameters: 2 id: 213 unit: void RepCartoonRefineNormals() file: layer2/RepCartoon.cpp start line: 3341 end line: 3476 size: 121 LOC McCabe index: 25 number of parameters: 12 id: 214 unit: static void ObjectSurfaceStateUpdateColors() file: layer2/ObjectSurface.cpp start line: 353 end line: 481 size: 121 LOC McCabe index: 32 number of parameters: 2 id: 215 unit: void OrthoBusyDraw() file: layer1/Ortho.cpp start line: 596 end line: 730 size: 120 LOC McCabe index: 19 number of parameters: 2 id: 216 unit: void ChampOrientBonds() file: contrib/champ/champ.c start line: 4129 end line: 4280 size: 120 LOC McCabe index: 25 number of parameters: 2 id: 217 unit: int AtomInfoGetExpectedValence() file: layer2/AtomInfo.cpp start line: 2219 end line: 2340 size: 120 LOC McCabe index: 39 number of parameters: 2 id: 218 unit: static void EditorConfigMouse() file: layer3/Editor.cpp start line: 156 end line: 286 size: 120 LOC McCabe index: 37 number of parameters: 1 id: 219 unit: def parseFile() file: modules/pymol/headering.py start line: 0 end line: 0 size: 119 LOC McCabe index: 7 number of parameters: 1 id: 220 unit: void SceneRenderAll() file: layer1/SceneRender.cpp start line: 719 end line: 850 size: 118 LOC McCabe index: 36 number of parameters: 11 id: 221 unit: static void RepCylinderImmediate() file: layer2/RepCylBond.cpp start line: 940 end line: 1091 size: 118 LOC McCabe index: 10 number of parameters: 9 id: 222 unit: def __init__() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 118 LOC McCabe index: 36 number of parameters: 2 id: 223 unit: void RepMeshColor() file: layer2/RepMesh.cpp start line: 566 end line: 704 size: 117 LOC McCabe index: 25 number of parameters: 2 id: 224 unit: int TextureGetFromChar() file: layer0/Texture.cpp start line: 129 end line: 254 size: 116 LOC McCabe index: 23 number of parameters: 3 id: 225 unit: static int read_rawgraphics() file: contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp start line: 85 end line: 226 size: 115 LOC McCabe index: 18 number of parameters: 3 id: 226 unit: int ObjectMoleculeSetMissingNeighborCoords() file: layer2/HydrogenAdder.cpp start line: 121 end line: 261 size: 115 LOC McCabe index: 23 number of parameters: 4 id: 227 unit: static void lookup_color() file: layer1/Color.cpp start line: 2729 end line: 2861 size: 114 LOC McCabe index: 21 number of parameters: 4 id: 228 unit: void GadgetSet::render() file: layer2/GadgetSet.cpp start line: 279 end line: 396 size: 113 LOC McCabe index: 22 number of parameters: 1 id: 229 unit: def pack() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 113 LOC McCabe index: 15 number of parameters: 1 id: 230 unit: OVstatus OVOneToOne_Set() file: ov/src/OVOneToOne.cpp start line: 524 end line: 653 size: 112 LOC McCabe index: 21 number of parameters: 3 id: 231 unit: bool cif_file::parse() file: layer2/CifFile.cpp start line: 240 end line: 387 size: 112 LOC McCabe index: 45 number of parameters: 0 id: 232 unit: def performance() file: modules/pymol/util.py start line: 0 end line: 0 size: 112 LOC McCabe index: 12 number of parameters: 2 id: 233 unit: void OrthoDrawWizardPrompt() file: layer1/Ortho.cpp start line: 1975 end line: 2108 size: 111 LOC McCabe index: 22 number of parameters: 1 id: 234 unit: void PixmapInitFromBytemap() file: layer0/Pixmap.cpp start line: 110 end line: 222 size: 111 LOC McCabe index: 19 number of parameters: 9 id: 235 unit: def get_default_keys() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 111 LOC McCabe index: 2 number of parameters: 1 id: 236 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 2017 end line: 2158 size: 110 LOC McCabe index: 21 number of parameters: 2 id: 237 unit: int CPopUp::drag() file: layer4/PopUp.cpp start line: 472 end line: 597 size: 110 LOC McCabe index: 34 number of parameters: 3 id: 238 unit: void CShaderMgr::Config() file: layer0/ShaderMgr.cpp start line: 682 end line: 824 size: 109 LOC McCabe index: 18 number of parameters: 0 id: 239 unit: static int get_int_hessian() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4594 end line: 4760 size: 109 LOC McCabe index: 18 number of parameters: 1 id: 240 unit: static bool read_struct_conn_() file: layer2/CifMoleculeReader.cpp start line: 1783 end line: 1927 size: 109 LOC McCabe index: 39 number of parameters: 5 id: 241 unit: int ObjectGadgetRampInterVertex() file: layer2/ObjectGadgetRamp.cpp start line: 478 end line: 589 size: 109 LOC McCabe index: 30 number of parameters: 4 id: 242 unit: void SceneSetFrame() file: layer1/Scene.cpp start line: 1983 end line: 2093 size: 108 LOC McCabe index: 23 number of parameters: 3 id: 243 unit: void ChampCountBondsEtc() file: contrib/champ/champ.c start line: 1020 end line: 1138 size: 107 LOC McCabe index: 36 number of parameters: 2 id: 244 unit: static int read_bgf_bonds_aux() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 310 end line: 434 size: 107 LOC McCabe index: 20 number of parameters: 5 id: 245 unit: def __init__() file: modules/pymol/computing.py start line: 0 end line: 0 size: 107 LOC McCabe index: 15 number of parameters: 5 id: 246 unit: int ViewElemSmooth() file: layer1/View.cpp start line: 691 end line: 803 size: 106 LOC McCabe index: 33 number of parameters: 4 id: 247 unit: void CShaderMgr::Generate_LightingTexture() file: layer0/ShaderMgr.cpp start line: 1434 end line: 1572 size: 106 LOC McCabe index: 18 number of parameters: 0 id: 248 unit: static int get_psf_atom() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 120 end line: 251 size: 106 LOC McCabe index: 22 number of parameters: 12 id: 249 unit: static int read_xbgf_bonds_aux() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 350 end line: 470 size: 106 LOC McCabe index: 20 number of parameters: 5 id: 250 unit: unsigned int SceneFindTriplet() file: layer1/ScenePicking.cpp start line: 36 end line: 162 size: 105 LOC McCabe index: 48 number of parameters: 5 id: 251 unit: void put_element_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 457 end line: 582 size: 105 LOC McCabe index: 12 number of parameters: 2 id: 252 unit: void RepCartoonComputeRoundHelices() file: layer2/RepCartoon.cpp start line: 3231 end line: 3338 size: 105 LOC McCabe index: 22 number of parameters: 6 id: 253 unit: static void MainDrawProgress() file: layer5/main.cpp start line: 629 end line: 764 size: 105 LOC McCabe index: 13 number of parameters: 1 id: 254 unit: static int read_js_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1114 end line: 1266 size: 104 LOC McCabe index: 23 number of parameters: 3 id: 255 unit: static int SculptCGOBump() file: layer2/Sculpt.cpp start line: 1446 end line: 1553 size: 104 LOC McCabe index: 17 number of parameters: 12 id: 256 unit: void EditorRender() file: layer3/Editor.cpp start line: 1538 end line: 1662 size: 104 LOC McCabe index: 31 number of parameters: 2 id: 257 unit: static int ProcessTetrahedron() file: layer0/Tetsurf.cpp start line: 110 end line: 212 size: 103 LOC McCabe index: 18 number of parameters: 13 id: 258 unit: def setup_alignment_contexts() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 103 LOC McCabe index: 24 number of parameters: 1 id: 259 unit: int ExtrudeRectangle() file: layer1/Extrude.cpp start line: 191 end line: 304 size: 102 LOC McCabe index: 14 number of parameters: 4 id: 260 unit: static int get_contrl_firefly() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1716 end line: 1850 size: 102 LOC McCabe index: 25 number of parameters: 1 id: 261 unit: static void ObjectSurfaceRenderRay() file: layer2/ObjectSurface.cpp start line: 819 end line: 925 size: 102 LOC McCabe index: 29 number of parameters: 4 id: 262 unit: int ObjectMoleculeGetNearestBlendedColor() file: layer2/ObjectMolecule2.cpp start line: 549 end line: 653 size: 102 LOC McCabe index: 24 number of parameters: 7 id: 263 unit: def file_save_mpeg() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 102 LOC McCabe index: 24 number of parameters: 2 id: 264 unit: static void RayReflectAndTexture() file: layer1/Ray.cpp start line: 471 end line: 576 size: 101 LOC McCabe index: 8 number of parameters: 3 id: 265 unit: int ColorGetIndex() file: layer1/Color.cpp start line: 651 end line: 754 size: 101 LOC McCabe index: 40 number of parameters: 2 id: 266 unit: int MatchMatrixFromFile() file: layer0/Match.cpp start line: 263 end line: 377 size: 101 LOC McCabe index: 26 number of parameters: 3 id: 267 unit: static int read_mdf_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 254 end line: 382 size: 101 LOC McCabe index: 24 number of parameters: 8 id: 268 unit: void RepRibbonRenderImmediate() file: layer2/RepRibbon.cpp start line: 566 end line: 671 size: 101 LOC McCabe index: 34 number of parameters: 2 id: 269 unit: void PyMOL_DrawWithoutLock() file: layer5/PyMOL.cpp start line: 2367 end line: 2490 size: 101 LOC McCabe index: 20 number of parameters: 1 id: 270 unit: int CRay::character() file: layer1/Ray.cpp start line: 6755 end line: 6891 size: 100 LOC McCabe index: 4 number of parameters: 1 id: 271 unit: int IsosurfGetRange() file: layer0/Isosurf.cpp start line: 736 end line: 854 size: 100 LOC McCabe index: 17 number of parameters: 7 id: 272 unit: static int get_contrl() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1858 end line: 1986 size: 100 LOC McCabe index: 25 number of parameters: 1 id: 273 unit: bool CShaderPrg::reload() file: layer0/ShaderMgr.cpp start line: 99 end line: 227 size: 99 LOC McCabe index: 17 number of parameters: 0 id: 274 unit: OVstatus OVOneToAny_SetKey() file: ov/src/OVOneToAny.cpp start line: 361 end line: 477 size: 99 LOC McCabe index: 15 number of parameters: 3 id: 275 unit: int CControl::release() file: layer1/Control.cpp start line: 288 end line: 387 size: 98 LOC McCabe index: 18 number of parameters: 4 id: 276 unit: void OrthoReshape() file: layer1/Ortho.cpp start line: 2182 end line: 2300 size: 98 LOC McCabe index: 20 number of parameters: 4 id: 277 unit: void CMovie::draw() file: layer1/Movie.cpp start line: 1837 end line: 1942 size: 98 LOC McCabe index: 26 number of parameters: 1 id: 278 unit: void ascii_get_element() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1405 end line: 1528 size: 98 LOC McCabe index: 15 number of parameters: 2 id: 279 unit: static int RepDihedralCGOGenerate() file: layer2/RepDihedral.cpp start line: 60 end line: 163 size: 98 LOC McCabe index: 35 number of parameters: 2 id: 280 unit: void ScrollBar::drawHandle() file: layer1/ScrollBar.cpp start line: 169 end line: 272 size: 97 LOC McCabe index: 8 number of parameters: 2 id: 281 unit: static int IsosurfDrawLines() file: layer0/Isosurf.cpp start line: 1687 end line: 1788 size: 97 LOC McCabe index: 18 number of parameters: 1 id: 282 unit: int get_basis() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2432 end line: 2592 size: 97 LOC McCabe index: 31 number of parameters: 1 id: 283 unit: static int read_dlpoly_structure() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 152 end line: 277 size: 97 LOC McCabe index: 24 number of parameters: 3 id: 284 unit: static int RepAngleCGOGenerate() file: layer2/RepAngle.cpp start line: 60 end line: 156 size: 97 LOC McCabe index: 34 number of parameters: 2 id: 285 unit: static int populate_other() file: layer2/ObjectMolecule2.cpp start line: 104 end line: 204 size: 97 LOC McCabe index: 37 number of parameters: 5 id: 286 unit: static int get_int_coords() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4438 end line: 4585 size: 96 LOC McCabe index: 15 number of parameters: 1 id: 287 unit: static int read_xsf_structure() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 536 end line: 663 size: 96 LOC McCabe index: 14 number of parameters: 3 id: 288 unit: void CoordSetAtomToPDBStrVLA() file: layer2/CoordSet.cpp start line: 901 end line: 1013 size: 96 LOC McCabe index: 19 number of parameters: 8 id: 289 unit: def pymol_apply() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 96 LOC McCabe index: 8 number of parameters: 2 id: 290 unit: static int find_edge() file: layer1/Ray.cpp start line: 2997 end line: 3111 size: 95 LOC McCabe index: 27 number of parameters: 5 id: 291 unit: void SceneRenderStereoLoop() file: layer1/SceneRender.cpp start line: 1069 end line: 1174 size: 95 LOC McCabe index: 30 number of parameters: 17 id: 292 unit: void OVHeap_Dump() file: ov/src/OVHeap.cpp start line: 147 end line: 247 size: 95 LOC McCabe index: 11 number of parameters: 2 id: 293 unit: static int ObjectVolumeStateFromPyList() file: layer2/ObjectVolume.cpp start line: 142 end line: 238 size: 95 LOC McCabe index: 35 number of parameters: 3 id: 294 unit: void RepSurfaceSmoothEdges() file: layer2/RepSurface.cpp start line: 4357 end line: 4460 size: 95 LOC McCabe index: 23 number of parameters: 1 id: 295 unit: static int ObjectMapStateDouble() file: layer2/ObjectMap.cpp start line: 717 end line: 816 size: 95 LOC McCabe index: 26 number of parameters: 2 id: 296 unit: def render_dialog() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 95 LOC McCabe index: 10 number of parameters: 2 id: 297 unit: def _encode() file: modules/pymol/movie.py start line: 0 end line: 0 size: 95 LOC McCabe index: 13 number of parameters: 11 id: 298 unit: def __init__() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 95 LOC McCabe index: 28 number of parameters: 2 id: 299 unit: void drawLineAsGeometryClipped() file: data/shaders/connector.gs start line: 78 end line: 193 size: 95 LOC McCabe index: 31 number of parameters: 9 id: 300 unit: int AtomInfoUniquefyNames() file: layer2/AtomInfo.cpp start line: 1156 end line: 1264 size: 94 LOC McCabe index: 25 number of parameters: 6 id: 301 unit: void CoordSetPurge() file: layer2/CoordSet.cpp start line: 449 end line: 551 size: 94 LOC McCabe index: 19 number of parameters: 1 id: 302 unit: def getLoadableFileTypes() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 94 LOC McCabe index: 1 number of parameters: 1 id: 303 unit: def _to_chempy() file: modules/chempy/mmtf/__init__.py start line: 0 end line: 0 size: 94 LOC McCabe index: 13 number of parameters: 2 id: 304 unit: void ScrollBar::drawImpl() file: layer1/ScrollBar.cpp start line: 66 end line: 167 size: 93 LOC McCabe index: 9 number of parameters: 2 id: 305 unit: void SceneDrawStencilInBuffer() file: layer1/SceneRender.cpp start line: 1511 end line: 1611 size: 93 LOC McCabe index: 9 number of parameters: 3 id: 306 unit: static int write_edm_data() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 345 end line: 474 size: 93 LOC McCabe index: 18 number of parameters: 4 id: 307 unit: void AtomInfoGetAlignedPDBAtomName() file: layer2/AtomInfo.cpp start line: 2871 end line: 2977 size: 93 LOC McCabe index: 35 number of parameters: 4 id: 308 unit: static void RepDotRender() file: layer2/RepDot.cpp start line: 158 end line: 261 size: 93 LOC McCabe index: 25 number of parameters: 2 id: 309 unit: int CoordSetFromPyList() file: layer2/CoordSet.cpp start line: 127 end line: 228 size: 93 LOC McCabe index: 35 number of parameters: 3 id: 310 unit: static void ObjectSurfaceRender() file: layer2/ObjectSurface.cpp start line: 946 end line: 1051 size: 93 LOC McCabe index: 29 number of parameters: 2 id: 311 unit: void tred2() file: modules/cealign/src/tnt/tnt_linalg.h start line: 314 end line: 427 size: 93 LOC McCabe index: 23 number of parameters: 0 id: 312 unit: void tred2() file: modules/cealign/src/tnt/jama_eig.h start line: 103 end line: 216 size: 93 LOC McCabe index: 23 number of parameters: 0 id: 313 unit: def _fetch() file: modules/pymol/importing.py start line: 0 end line: 0 size: 93 LOC McCabe index: 37 number of parameters: 12 id: 314 unit: static int LineToSphere() file: layer1/Basis.cpp start line: 165 end line: 316 size: 92 LOC McCabe index: 11 number of parameters: 8 id: 315 unit: static int write_bgf_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 471 end line: 577 size: 92 LOC McCabe index: 16 number of parameters: 2 id: 316 unit: static int RepDotCGOGenerate() file: layer2/RepDot.cpp start line: 59 end line: 156 size: 92 LOC McCabe index: 33 number of parameters: 2 id: 317 unit: def get_zmat_ext_freeze_torsion() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 92 LOC McCabe index: 26 number of parameters: 2 id: 318 unit: static void RepAngleRender() file: layer2/RepAngle.cpp start line: 204 end line: 305 size: 91 LOC McCabe index: 24 number of parameters: 2 id: 319 unit: std::vector ObjectMapStateToCCP4Str() file: layer2/ObjectMap.cpp start line: 2819 end line: 2947 size: 91 LOC McCabe index: 17 number of parameters: 2 id: 320 unit: int ButModeInit() file: layer1/ButMode.cpp start line: 480 end line: 579 size: 90 LOC McCabe index: 3 number of parameters: 1 id: 321 unit: static int get_basis_options() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1294 end line: 1436 size: 90 LOC McCabe index: 26 number of parameters: 1 id: 322 unit: static int get_normal_modes() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4193 end line: 4340 size: 90 LOC McCabe index: 16 number of parameters: 1 id: 323 unit: static int RepWireZeroOrderBond() file: layer2/RepWireBond.cpp start line: 476 end line: 574 size: 90 LOC McCabe index: 17 number of parameters: 14 id: 324 unit: int ObjectMoleculeSort() file: layer2/ObjectMolecule2.cpp start line: 4413 end line: 4512 size: 90 LOC McCabe index: 22 number of parameters: 1 id: 325 unit: def prepare_call() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 90 LOC McCabe index: 38 number of parameters: 5 id: 326 unit: def _processPWG() file: modules/pymol/importing.py start line: 0 end line: 0 size: 90 LOC McCabe index: 32 number of parameters: 2 id: 327 unit: def get_list() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 90 LOC McCabe index: 14 number of parameters: 1 id: 328 unit: int CRay::ellipsoid3fv() file: layer1/Ray.cpp start line: 7200 end line: 7304 size: 89 LOC McCabe index: 7 number of parameters: 5 id: 329 unit: int MapSetupExpressXYVert() file: layer0/Map.cpp start line: 318 end line: 424 size: 89 LOC McCabe index: 21 number of parameters: 4 id: 330 unit: void binary_get_element() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1539 end line: 1649 size: 89 LOC McCabe index: 14 number of parameters: 2 id: 331 unit: static int read_dcdstep() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 528 end line: 662 size: 89 LOC McCabe index: 21 number of parameters: 12 id: 332 unit: static BlobMap read_frame() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 784 end line: 882 size: 89 LOC McCabe index: 15 number of parameters: 2 id: 333 unit: static int read_vaspoutcar_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c start line: 105 end line: 221 size: 89 LOC McCabe index: 29 number of parameters: 3 id: 334 unit: void RepWireBondRenderImmediate() file: layer2/RepWireBond.cpp start line: 242 end line: 353 size: 89 LOC McCabe index: 20 number of parameters: 2 id: 335 unit: int CMovie::release() file: layer1/Movie.cpp start line: 1701 end line: 1791 size: 88 LOC McCabe index: 35 number of parameters: 4 id: 336 unit: bool Timekeys::init() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 410 end line: 514 size: 88 LOC McCabe index: 18 number of parameters: 1 id: 337 unit: static int read_dlpoly_config_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 560 end line: 672 size: 88 LOC McCabe index: 28 number of parameters: 3 id: 338 unit: void write_ct_atoms() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1353 end line: 1448 size: 88 LOC McCabe index: 21 number of parameters: 5 id: 339 unit: static void nuc_acid() file: layer2/RepCartoon.cpp start line: 1430 end line: 1527 size: 88 LOC McCabe index: 24 number of parameters: 8 id: 340 unit: void tql2() file: modules/cealign/src/tnt/tnt_linalg.h start line: 431 end line: 550 size: 88 LOC McCabe index: 16 number of parameters: 0 id: 341 unit: void tql2() file: modules/cealign/src/tnt/jama_eig.h start line: 220 end line: 339 size: 88 LOC McCabe index: 16 number of parameters: 0 id: 342 unit: int ColorFromPyList() file: layer1/Color.cpp start line: 486 end line: 576 size: 87 LOC McCabe index: 29 number of parameters: 3 id: 343 unit: void SceneRenderPickingMultiPick() file: layer1/ScenePicking.cpp start line: 390 end line: 496 size: 86 LOC McCabe index: 28 number of parameters: 4 id: 344 unit: void TetsurfGetRange() file: layer0/Tetsurf.cpp start line: 410 end line: 514 size: 86 LOC McCabe index: 13 number of parameters: 6 id: 345 unit: string CShaderMgr::GetShaderSource() file: layer0/ShaderMgr.cpp start line: 434 end line: 556 size: 86 LOC McCabe index: 26 number of parameters: 1 id: 346 unit: static void vtf_parse_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 764 end line: 873 size: 86 LOC McCabe index: 27 number of parameters: 1 id: 347 unit: static int symmetry_expand() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 711 end line: 825 size: 86 LOC McCabe index: 17 number of parameters: 5 id: 348 unit: def _generatePdb2pqrPqrFile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 86 LOC McCabe index: 14 number of parameters: 1 id: 349 unit: int ViewElemFromPyList() file: layer1/View.cpp start line: 422 end line: 514 size: 85 LOC McCabe index: 41 number of parameters: 3 id: 350 unit: int TetsurfVolume() file: layer0/Tetsurf.cpp start line: 518 end line: 628 size: 84 LOC McCabe index: 19 number of parameters: 11 id: 351 unit: static void print_input_data() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1002 end line: 1094 size: 84 LOC McCabe index: 8 number of parameters: 1 id: 352 unit: void construct_frame() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1812 end line: 1921 size: 84 LOC McCabe index: 4 number of parameters: 2 id: 353 unit: void CoordSet::invalidateRep() file: layer2/CoordSet.cpp start line: 1101 end line: 1197 size: 84 LOC McCabe index: 33 number of parameters: 2 id: 354 unit: static int ObjectMapNumPyArrayToMapState() file: layer2/ObjectMap.cpp start line: 5624 end line: 5710 size: 84 LOC McCabe index: 19 number of parameters: 4 id: 355 unit: bool MovieSceneRecall() file: layer3/MovieScene.cpp start line: 372 end line: 497 size: 84 LOC McCabe index: 24 number of parameters: 9 id: 356 unit: void SceneClip() file: layer1/Scene.cpp start line: 1240 end line: 1323 size: 83 LOC McCabe index: 19 number of parameters: 5 id: 357 unit: int CMovie::click() file: layer1/Movie.cpp start line: 1580 end line: 1664 size: 83 LOC McCabe index: 15 number of parameters: 4 id: 358 unit: void SceneRenderAllObject() file: layer1/SceneRender.cpp start line: 599 end line: 701 size: 83 LOC McCabe index: 19 number of parameters: 10 id: 359 unit: static xx_word xx_matrix_decompose() file: layer0/Matrix.cpp start line: 208 end line: 302 size: 83 LOC McCabe index: 22 number of parameters: 4 id: 360 unit: int DtrWriter::next() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1990 end line: 2087 size: 83 LOC McCabe index: 11 number of parameters: 1 id: 361 unit: static void RepAromatic() file: layer2/RepWireBond.cpp start line: 141 end line: 228 size: 83 LOC McCabe index: 9 number of parameters: 19 id: 362 unit: static void SeekerSelectionToggleRange() file: layer3/Seeker.cpp start line: 71 end line: 169 size: 83 LOC McCabe index: 14 number of parameters: 7 id: 363 unit: def createMenuBar() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 83 LOC McCabe index: 16 number of parameters: 1 id: 364 unit: void SceneProgramLighting() file: layer1/Scene.cpp start line: 6701 end line: 6805 size: 82 LOC McCabe index: 12 number of parameters: 2 id: 365 unit: static int fill_basis_arrays() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2639 end line: 2768 size: 82 LOC McCabe index: 15 number of parameters: 1 id: 366 unit: void RepCartoonFlattenSheets() file: layer2/RepCartoon.cpp start line: 3479 end line: 3562 size: 82 LOC McCabe index: 21 number of parameters: 13 id: 367 unit: int VFontWriteToCGO() file: layer2/VFont.cpp start line: 57 end line: 138 size: 82 LOC McCabe index: 18 number of parameters: 8 id: 368 unit: def dynamics() file: modules/chempy/tinker/state.py start line: 0 end line: 0 size: 82 LOC McCabe index: 20 number of parameters: 7 id: 369 unit: def add_hydrogens() file: modules/chempy/protein.py start line: 0 end line: 0 size: 82 LOC McCabe index: 30 number of parameters: 3 id: 370 unit: static void draw_button() file: layer1/Scene.cpp start line: 2617 end line: 2699 size: 81 LOC McCabe index: 6 number of parameters: 8 id: 371 unit: int CRay::cone3fv() file: layer1/Ray.cpp start line: 7036 end line: 7129 size: 81 LOC McCabe index: 9 number of parameters: 8 id: 372 unit: static void draw_button() file: layer1/Wizard.cpp start line: 737 end line: 820 size: 81 LOC McCabe index: 6 number of parameters: 7 id: 373 unit: int MapSetupExpress() file: layer0/Map.cpp start line: 574 end line: 660 size: 81 LOC McCabe index: 23 number of parameters: 1 id: 374 unit: void ChampDetectChirality() file: contrib/champ/champ.c start line: 4345 end line: 4465 size: 81 LOC McCabe index: 11 number of parameters: 2 id: 375 unit: static PyMOLreturn_status Loader() file: layer5/PyMOL.cpp start line: 1569 end line: 1657 size: 81 LOC McCabe index: 23 number of parameters: 12 id: 376 unit: static int ExecutiveSliceNew() file: layer4/Cmd.cpp start line: 3626 end line: 3710 size: 81 LOC McCabe index: 21 number of parameters: 5 id: 377 unit: void SceneTranslateScaled() file: layer1/Scene.cpp start line: 1052 end line: 1138 size: 80 LOC McCabe index: 15 number of parameters: 5 id: 378 unit: void CWizard::draw() file: layer1/Wizard.cpp start line: 837 end line: 932 size: 80 LOC McCabe index: 13 number of parameters: 1 id: 379 unit: int TrackerLink() file: layer0/Tracker.cpp start line: 714 end line: 814 size: 80 LOC McCabe index: 17 number of parameters: 4 id: 380 unit: static int write_xbgf_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 509 end line: 603 size: 80 LOC McCabe index: 13 number of parameters: 2 id: 381 unit: void CartoonGenerateSample() file: layer2/RepCartoon.cpp start line: 2129 end line: 2220 size: 80 LOC McCabe index: 6 number of parameters: 20 id: 382 unit: static void ObjectCGORenderState() file: layer2/ObjectCGO.cpp start line: 258 end line: 339 size: 80 LOC McCabe index: 25 number of parameters: 10 id: 383 unit: def fit() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 80 LOC McCabe index: 22 number of parameters: 2 id: 384 unit: def load() file: data/chempy/tinker/make_simple.py start line: 0 end line: 0 size: 80 LOC McCabe index: 29 number of parameters: 2 id: 385 unit: int TrackerDelCand() file: layer0/Tracker.cpp start line: 319 end line: 427 size: 79 LOC McCabe index: 13 number of parameters: 2 id: 386 unit: int TrackerDelList() file: layer0/Tracker.cpp start line: 603 end line: 712 size: 79 LOC McCabe index: 13 number of parameters: 2 id: 387 unit: bool MovieSceneFunc() file: layer3/MovieScene.cpp start line: 648 end line: 743 size: 79 LOC McCabe index: 19 number of parameters: 13 id: 388 unit: def readcex() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 79 LOC McCabe index: 4 number of parameters: 2 id: 389 unit: int TrackerUnlink() file: layer0/Tracker.cpp start line: 816 end line: 916 size: 78 LOC McCabe index: 14 number of parameters: 3 id: 390 unit: static int elmhes_() file: layer0/Matrix.cpp start line: 2245 end line: 2445 size: 78 LOC McCabe index: 13 number of parameters: 6 id: 391 unit: OVreturn_word OVLexicon_GetFromCString() file: ov/src/OVLexicon.cpp start line: 250 end line: 340 size: 78 LOC McCabe index: 10 number of parameters: 2 id: 392 unit: static int read_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 736 end line: 834 size: 78 LOC McCabe index: 19 number of parameters: 5 id: 393 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 640 end line: 727 size: 78 LOC McCabe index: 1 number of parameters: 0 id: 394 unit: int ObjectMapStateGetExcludedStats() file: layer2/ObjectMap.cpp start line: 229 end line: 317 size: 78 LOC McCabe index: 21 number of parameters: 6 id: 395 unit: static int ObjectMapStateFromPyList() file: layer2/ObjectMap.cpp start line: 1456 end line: 1536 size: 78 LOC McCabe index: 29 number of parameters: 3 id: 396 unit: def _session_convert_legacy() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 78 LOC McCabe index: 40 number of parameters: 3 id: 397 unit: static int RayTransformBasis() file: layer1/Ray.cpp start line: 977 end line: 1057 size: 77 LOC McCabe index: 19 number of parameters: 3 id: 398 unit: static int ObjectMeshStateFromPyList() file: layer2/ObjectMesh.cpp start line: 118 end line: 197 size: 77 LOC McCabe index: 30 number of parameters: 3 id: 399 unit: static int SolventDotCircumscribeAroundVertex() file: layer2/RepSurface.cpp start line: 4550 end line: 4635 size: 77 LOC McCabe index: 24 number of parameters: 18 id: 400 unit: static void add_triangle_limits() file: layer2/Sculpt.cpp start line: 307 end line: 388 size: 77 LOC McCabe index: 29 number of parameters: 5 id: 401 unit: int EditorInvert() file: layer3/Editor.cpp start line: 601 end line: 685 size: 77 LOC McCabe index: 15 number of parameters: 2 id: 402 unit: def _fab() file: modules/pymol/editor.py start line: 0 end line: 0 size: 77 LOC McCabe index: 25 number of parameters: 12 id: 403 unit: static int ZLineToSphere() file: layer1/Basis.cpp start line: 40 end line: 160 size: 76 LOC McCabe index: 10 number of parameters: 8 id: 404 unit: int OrthoInit() file: layer1/Ortho.cpp start line: 2517 end line: 2607 size: 76 LOC McCabe index: 4 number of parameters: 2 id: 405 unit: static int write_situs_data() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 243 end line: 348 size: 76 LOC McCabe index: 21 number of parameters: 4 id: 406 unit: static int read_vaspchgcar_data() file: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c start line: 206 end line: 304 size: 76 LOC McCabe index: 37 number of parameters: 4 id: 407 unit: int AtomInfoKnownWaterResName() file: layer2/AtomInfo.cpp start line: 509 end line: 584 size: 76 LOC McCabe index: 22 number of parameters: 2 id: 408 unit: void RepCartoonSmoothLoops() file: layer2/RepCartoon.cpp start line: 3595 end line: 3674 size: 76 LOC McCabe index: 25 number of parameters: 12 id: 409 unit: bool SideChainHelperFilterBond() file: layer2/SideChainHelper.cpp start line: 91 end line: 173 size: 76 LOC McCabe index: 50 number of parameters: 9 id: 410 unit: void RepCylBondRenderImmediate() file: layer2/RepCylBond.cpp start line: 1094 end line: 1198 size: 76 LOC McCabe index: 16 number of parameters: 2 id: 411 unit: int EditorSelect() file: layer3/Editor.cpp start line: 762 end line: 849 size: 76 LOC McCabe index: 35 number of parameters: 8 id: 412 unit: def file_save2() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 76 LOC McCabe index: 25 number of parameters: 4 id: 413 unit: bool StkReader::init() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 982 end line: 1075 size: 75 LOC McCabe index: 25 number of parameters: 2 id: 414 unit: static int read_vasp5xdatcar_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c start line: 102 end line: 207 size: 75 LOC McCabe index: 20 number of parameters: 3 id: 415 unit: static void RepRibbonRender() file: layer2/RepRibbon.cpp start line: 67 end line: 144 size: 75 LOC McCabe index: 31 number of parameters: 2 id: 416 unit: static int RepZeroOrderBond() file: layer2/RepCylBond.cpp start line: 229 end line: 311 size: 75 LOC McCabe index: 15 number of parameters: 14 id: 417 unit: void ObjectMoleculeM4XAnnotate() file: layer2/ObjectMolecule2.cpp start line: 3140 end line: 3237 size: 75 LOC McCabe index: 13 number of parameters: 5 id: 418 unit: def run() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 75 LOC McCabe index: 20 number of parameters: 2 id: 419 unit: def get_session() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 75 LOC McCabe index: 24 number of parameters: 6 id: 420 unit: static int LineClipEllipsoidPoint() file: layer1/Basis.cpp start line: 1242 end line: 1355 size: 74 LOC McCabe index: 5 number of parameters: 10 id: 421 unit: void SetDrawBufferForStereo() file: layer1/SceneRender.cpp start line: 1411 end line: 1486 size: 74 LOC McCabe index: 18 number of parameters: 6 id: 422 unit: int MapSetupExpressXY() file: layer0/Map.cpp start line: 228 end line: 316 size: 74 LOC McCabe index: 17 number of parameters: 3 id: 423 unit: static int handle_anton_sfxp_v3() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1589 end line: 1673 size: 74 LOC McCabe index: 11 number of parameters: 5 id: 424 unit: static void ObjectAlignmentRender() file: layer2/ObjectAlignment.cpp start line: 1088 end line: 1181 size: 74 LOC McCabe index: 23 number of parameters: 2 id: 425 unit: int ExtrudeDumbbell1() file: layer1/Extrude.cpp start line: 306 end line: 388 size: 73 LOC McCabe index: 10 number of parameters: 4 id: 426 unit: int SettingUniqueFromPyList() file: layer1/Setting.cpp start line: 708 end line: 782 size: 73 LOC McCabe index: 26 number of parameters: 3 id: 427 unit: void WizardRefresh() file: layer1/Wizard.cpp start line: 180 end line: 265 size: 73 LOC McCabe index: 19 number of parameters: 1 id: 428 unit: static int recursive_match() file: layer0/Word.cpp start line: 412 end line: 486 size: 73 LOC McCabe index: 31 number of parameters: 4 id: 429 unit: int MatchResidueToCode() file: layer0/Match.cpp start line: 95 end line: 190 size: 73 LOC McCabe index: 7 number of parameters: 3 id: 430 unit: void renderTarget_t::layout() file: layer0/GenericBuffer.cpp start line: 364 end line: 442 size: 73 LOC McCabe index: 16 number of parameters: 2 id: 431 unit: int ObjectMoleculeAddSeleHydrogensRefactored() file: layer2/HydrogenAdder.cpp start line: 266 end line: 364 size: 73 LOC McCabe index: 17 number of parameters: 3 id: 432 unit: static int ObjectMoleculeBondFromPyList() file: layer2/ObjectMolecule2.cpp start line: 3606 end line: 3688 size: 73 LOC McCabe index: 25 number of parameters: 2 id: 433 unit: static void fill_background_image() file: layer1/Ray.cpp start line: 354 end line: 428 size: 72 LOC McCabe index: 11 number of parameters: 5 id: 434 unit: void SceneRenderPickingSinglePick() file: layer1/ScenePicking.cpp start line: 200 end line: 293 size: 72 LOC McCabe index: 20 number of parameters: 6 id: 435 unit: int FieldSmooth3f() file: layer0/Field.cpp start line: 373 end line: 451 size: 72 LOC McCabe index: 20 number of parameters: 1 id: 436 unit: def formal_charges() file: modules/chempy/champ/assign.py start line: 0 end line: 0 size: 72 LOC McCabe index: 34 number of parameters: 1 id: 437 unit: static int VectorHash_GetOrSetKeyValue() file: layer1/Ray.cpp start line: 1680 end line: 1766 size: 71 LOC McCabe index: 10 number of parameters: 4 id: 438 unit: static int read_gamess_rundata() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 555 end line: 649 size: 71 LOC McCabe index: 16 number of parameters: 2 id: 439 unit: void Get_Property_Values() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 89 end line: 180 size: 71 LOC McCabe index: 19 number of parameters: 4 id: 440 unit: static int read_dlpoly_config_structure() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 280 end line: 372 size: 71 LOC McCabe index: 16 number of parameters: 3 id: 441 unit: static void ObjectMeshStateUpdateColors() file: layer2/ObjectMesh.cpp start line: 436 end line: 513 size: 71 LOC McCabe index: 20 number of parameters: 2 id: 442 unit: static int RepNonbondedCGOGenerate() file: layer2/RepNonbonded.cpp start line: 114 end line: 189 size: 71 LOC McCabe index: 23 number of parameters: 2 id: 443 unit: static int ObjectMoleculeAtomFromPyList() file: layer2/ObjectMolecule2.cpp start line: 3767 end line: 3854 size: 71 LOC McCabe index: 14 number of parameters: 2 id: 444 unit: def get_default_location() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 71 LOC McCabe index: 21 number of parameters: 1 id: 445 unit: short CharacterRenderOpenGL() file: layer1/Character.cpp start line: 226 end line: 300 size: 70 LOC McCabe index: 12 number of parameters: 5 id: 446 unit: void RayComputeBox() file: layer1/Ray.cpp start line: 760 end line: 839 size: 70 LOC McCabe index: 16 number of parameters: 1 id: 447 unit: int get_basis() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 369 end line: 484 size: 70 LOC McCabe index: 20 number of parameters: 1 id: 448 unit: void recursivelyRemove() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 315 end line: 408 size: 70 LOC McCabe index: 18 number of parameters: 1 id: 449 unit: static float ShakerDoTors() file: layer2/Sculpt.cpp start line: 110 end line: 194 size: 70 LOC McCabe index: 14 number of parameters: 11 id: 450 unit: function str() file: modules/web/javascript/json2.js start line: 221 end line: 345 size: 70 LOC McCabe index: 29 number of parameters: 2 id: 451 unit: void SceneFromViewElem() file: layer1/Scene.cpp start line: 684 end line: 760 size: 69 LOC McCabe index: 12 number of parameters: 3 id: 452 unit: int WordMatchComma() file: layer0/Word.cpp start line: 795 end line: 868 size: 69 LOC McCabe index: 30 number of parameters: 4 id: 453 unit: static void ChampStereoToInternal() file: contrib/champ/champ.c start line: 3962 end line: 4043 size: 69 LOC McCabe index: 12 number of parameters: 2 id: 454 unit: static int get_input_structure() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1470 end line: 1570 size: 69 LOC McCabe index: 9 number of parameters: 2 id: 455 unit: static int read_angles() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 562 end line: 644 size: 69 LOC McCabe index: 5 number of parameters: 20 id: 456 unit: static int read_vaspxdatcar_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c start line: 156 end line: 255 size: 69 LOC McCabe index: 22 number of parameters: 3 id: 457 unit: static int fill_basis_arrays() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 533 end line: 636 size: 69 LOC McCabe index: 13 number of parameters: 1 id: 458 unit: static int read_mol2_bonds_aux() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 180 end line: 263 size: 69 LOC McCabe index: 14 number of parameters: 5 id: 459 unit: static int _ObjectGadgetRampInterpolate() file: layer2/ObjectGadgetRamp.cpp start line: 151 end line: 220 size: 69 LOC McCabe index: 15 number of parameters: 4 id: 460 unit: static int _ObjectGadgetRampBlend() file: layer2/ObjectGadgetRamp.cpp start line: 225 end line: 297 size: 69 LOC McCabe index: 23 number of parameters: 4 id: 461 unit: def file_save_png() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 69 LOC McCabe index: 6 number of parameters: 1 id: 462 unit: def reps() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 69 LOC McCabe index: 10 number of parameters: 2 id: 463 unit: def read_atom_site_cartn() file: modules/chempy/cif.py start line: 0 end line: 0 size: 69 LOC McCabe index: 26 number of parameters: 4 id: 464 unit: void OrthoSpecial() file: layer1/Ortho.cpp start line: 298 end line: 367 size: 68 LOC McCabe index: 16 number of parameters: 5 id: 465 unit: int MovieViewModify() file: layer1/Movie.cpp start line: 154 end line: 221 size: 68 LOC McCabe index: 26 number of parameters: 7 id: 466 unit: void MovieAppendSequence() file: layer1/Movie.cpp start line: 943 end line: 1021 size: 68 LOC McCabe index: 16 number of parameters: 4 id: 467 unit: static void ChampStereoFromInternal() file: contrib/champ/champ.c start line: 4045 end line: 4126 size: 68 LOC McCabe index: 12 number of parameters: 2 id: 468 unit: static int read_dsn6_data() file: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp start line: 192 end line: 281 size: 68 LOC McCabe index: 12 number of parameters: 4 id: 469 unit: int PlugIOManagerFreeAll() file: contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c start line: 340 end line: 408 size: 68 LOC McCabe index: 127 number of parameters: 1 id: 470 unit: static int ObjectMoleculeFindBestDonorH() file: layer2/ObjectMolecule2.cpp start line: 3316 end line: 3406 size: 68 LOC McCabe index: 22 number of parameters: 6 id: 471 unit: static void DrawBlueLine() file: layer5/main.cpp start line: 281 end line: 367 size: 68 LOC McCabe index: 5 number of parameters: 1 id: 472 unit: def highlightBlock() file: modules/pmg_qt/syntax/pml.py start line: 0 end line: 0 size: 68 LOC McCabe index: 22 number of parameters: 2 id: 473 unit: def onmousedown() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 68 LOC McCabe index: 18 number of parameters: 2 id: 474 unit: def setup_contexts() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 68 LOC McCabe index: 15 number of parameters: 1 id: 475 unit: static void SceneDoRoving() file: layer1/Scene.cpp start line: 3402 end line: 3491 size: 67 LOC McCabe index: 17 number of parameters: 6 id: 476 unit: void SceneUpdateAnimation() file: layer1/Scene.cpp start line: 6151 end line: 6229 size: 67 LOC McCabe index: 18 number of parameters: 1 id: 477 unit: void RayPrepare() file: layer1/Ray.cpp start line: 7572 end line: 7647 size: 67 LOC McCabe index: 9 number of parameters: 19 id: 478 unit: float ShakerDoPlan() file: layer1/Shaker.cpp start line: 187 end line: 287 size: 67 LOC McCabe index: 11 number of parameters: 11 id: 479 unit: static int parseNumberAtoms() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 338 end line: 420 size: 67 LOC McCabe index: 25 number of parameters: 1 id: 480 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 939 end line: 1025 size: 67 LOC McCabe index: 12 number of parameters: 2 id: 481 unit: static int count_orbitals() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1110 end line: 1219 size: 67 LOC McCabe index: 13 number of parameters: 1 id: 482 unit: static int SurfaceJobEliminateCloseDotsType3orMore() file: layer2/RepSurface.cpp start line: 3063 end line: 3131 size: 67 LOC McCabe index: 17 number of parameters: 4 id: 483 unit: def file_save() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 67 LOC McCabe index: 10 number of parameters: 1 id: 484 unit: void orthes() file: modules/cealign/src/tnt/tnt_linalg.h start line: 554 end line: 643 size: 67 LOC McCabe index: 21 number of parameters: 0 id: 485 unit: void orthes() file: modules/cealign/src/tnt/jama_eig.h start line: 343 end line: 432 size: 67 LOC McCabe index: 21 number of parameters: 0 id: 486 unit: def page_settings() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 67 LOC McCabe index: 9 number of parameters: 2 id: 487 unit: def reps() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 67 LOC McCabe index: 9 number of parameters: 2 id: 488 unit: def create_dialog() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 67 LOC McCabe index: 6 number of parameters: 0 id: 489 unit: void SceneIdle() file: layer1/Scene.cpp start line: 2309 end line: 2378 size: 66 LOC McCabe index: 16 number of parameters: 1 id: 490 unit: int SettingUniqueSetTypedValue() file: layer1/Setting.cpp start line: 358 end line: 431 size: 66 LOC McCabe index: 17 number of parameters: 5 id: 491 unit: static bool is_session_blacklisted() file: layer1/Setting.cpp start line: 639 end line: 706 size: 66 LOC McCabe index: 56 number of parameters: 1 id: 492 unit: int OrthoButton() file: layer1/Ortho.cpp start line: 2341 end line: 2413 size: 66 LOC McCabe index: 18 number of parameters: 6 id: 493 unit: void PixmapInitFromBitmap() file: layer0/Pixmap.cpp start line: 41 end line: 108 size: 66 LOC McCabe index: 13 number of parameters: 7 id: 494 unit: OVstatus OVLexicon_Pack() file: ov/src/OVLexicon.cpp start line: 115 end line: 188 size: 66 LOC McCabe index: 12 number of parameters: 1 id: 495 unit: static int get_coordinates() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 285 end line: 442 size: 66 LOC McCabe index: 7 number of parameters: 4 id: 496 unit: static int have_gamess() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1104 end line: 1183 size: 66 LOC McCabe index: 17 number of parameters: 2 id: 497 unit: static int write_dx_data() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 378 end line: 455 size: 66 LOC McCabe index: 12 number of parameters: 4 id: 498 unit: int read_structure() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1708 end line: 1792 size: 66 LOC McCabe index: 11 number of parameters: 3 id: 499 unit: static void RepSurfaceSetSettings() file: layer2/RepSurface.cpp start line: 3821 end line: 3894 size: 66 LOC McCabe index: 19 number of parameters: 9 id: 500 unit: static int RepSurfacePrepareSurfaceJob() file: layer2/RepSurface.cpp start line: 3896 end line: 3969 size: 66 LOC McCabe index: 10 number of parameters: 17 id: 501 unit: int SceneCopyExternal() file: layer1/Scene.cpp start line: 1786 end line: 1866 size: 65 LOC McCabe index: 18 number of parameters: 6 id: 502 unit: static void RayPrimGetColorRamped() file: layer1/Ray.cpp start line: 3113 end line: 3183 size: 65 LOC McCabe index: 13 number of parameters: 4 id: 503 unit: static int TriangleBuildLast() file: layer0/Triangle.cpp start line: 1499 end line: 1566 size: 65 LOC McCabe index: 21 number of parameters: 6 id: 504 unit: static int get_basis_stats() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2259 end line: 2374 size: 65 LOC McCabe index: 5 number of parameters: 1 id: 505 unit: static int get_scfdata() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 3372 end line: 3456 size: 65 LOC McCabe index: 14 number of parameters: 2 id: 506 unit: static int check_add_wavefunctions() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 3467 end line: 3557 size: 65 LOC McCabe index: 18 number of parameters: 2 id: 507 unit: void get_binary_item() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2042 end line: 2108 size: 65 LOC McCabe index: 9 number of parameters: 5 id: 508 unit: static int read_rawgraphics() file: contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp start line: 117 end line: 217 size: 65 LOC McCabe index: 13 number of parameters: 3 id: 509 unit: static int read_datasource() file: contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp start line: 89 end line: 181 size: 65 LOC McCabe index: 14 number of parameters: 2 id: 510 unit: static int read_molden_structure() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 274 end line: 368 size: 65 LOC McCabe index: 9 number of parameters: 3 id: 511 unit: int ObjectGadgetRampNewFromPyList() file: layer2/ObjectGadgetRamp.cpp start line: 400 end line: 476 size: 65 LOC McCabe index: 27 number of parameters: 4 id: 512 unit: int ObjectMapStateGetHistogram() file: layer2/ObjectMap.cpp start line: 367 end line: 437 size: 65 LOC McCabe index: 14 number of parameters: 7 id: 513 unit: static void MainDraw() file: layer5/main.cpp start line: 768 end line: 839 size: 65 LOC McCabe index: 18 number of parameters: 1 id: 514 unit: static void SeekerSelectionToggle() file: layer3/Seeker.cpp start line: 171 end line: 251 size: 65 LOC McCabe index: 13 number of parameters: 6 id: 515 unit: void PLog() file: layer1/P.cpp start line: 2411 end line: 2474 size: 64 LOC McCabe index: 22 number of parameters: 3 id: 516 unit: void RayRenderObjMtl() file: layer1/Ray.cpp start line: 2457 end line: 2540 size: 64 LOC McCabe index: 5 number of parameters: 10 id: 517 unit: static int TriangleBuildThirdPass() file: layer0/Triangle.cpp start line: 1430 end line: 1497 size: 64 LOC McCabe index: 17 number of parameters: 6 id: 518 unit: static int ObjectSurfaceStateFromPyList() file: layer2/ObjectSurface.cpp start line: 99 end line: 164 size: 64 LOC McCabe index: 27 number of parameters: 3 id: 519 unit: int ObjectMoleculeGetCheckHBond() file: layer2/ObjectMolecule2.cpp start line: 3411 end line: 3491 size: 64 LOC McCabe index: 21 number of parameters: 9 id: 520 unit: def _read_m_atom() file: modules/chempy/mae.py start line: 0 end line: 0 size: 64 LOC McCabe index: 28 number of parameters: 3 id: 521 unit: void OrthoAddOutput() file: layer1/Ortho.cpp start line: 1064 end line: 1128 size: 63 LOC McCabe index: 12 number of parameters: 2 id: 522 unit: static int get_proc_mem() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1192 end line: 1286 size: 63 LOC McCabe index: 19 number of parameters: 2 id: 523 unit: static int read_vaspparchg_data() file: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c start line: 207 end line: 285 size: 63 LOC McCabe index: 30 number of parameters: 4 id: 524 unit: static int read_vaspposcar_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 121 end line: 213 size: 63 LOC McCabe index: 19 number of parameters: 3 id: 525 unit: static int trx_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1392 end line: 1469 size: 63 LOC McCabe index: 30 number of parameters: 2 id: 526 unit: def __init__() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 63 LOC McCabe index: 1 number of parameters: 2 id: 527 unit: int SceneLoadPNG() file: layer1/Scene.cpp start line: 2535 end line: 2597 size: 62 LOC McCabe index: 14 number of parameters: 5 id: 528 unit: void SettingInitGlobal() file: layer1/Setting.cpp start line: 2959 end line: 3077 size: 62 LOC McCabe index: 14 number of parameters: 4 id: 529 unit: int ViewElemModify() file: layer1/View.cpp start line: 34 end line: 96 size: 62 LOC McCabe index: 27 number of parameters: 6 id: 530 unit: int UtilSemiSortFloatIndexWithNBinsImpl() file: layer0/Util.cpp start line: 414 end line: 499 size: 62 LOC McCabe index: 15 number of parameters: 6 id: 531 unit: static int write_dcdheader() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 762 end line: 828 size: 62 LOC McCabe index: 4 number of parameters: 8 id: 532 unit: static int DEN_read_volumetric_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 776 end line: 881 size: 62 LOC McCabe index: 14 number of parameters: 3 id: 533 unit: static int read_uhbd_data() file: contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp start line: 227 end line: 308 size: 62 LOC McCabe index: 16 number of parameters: 4 id: 534 unit: static int ObjectMapStateCopy() file: layer2/ObjectMap.cpp start line: 1378 end line: 1454 size: 62 LOC McCabe index: 14 number of parameters: 3 id: 535 unit: def add_hydrogens() file: modules/chempy/hetatm.py start line: 0 end line: 0 size: 62 LOC McCabe index: 17 number of parameters: 3 id: 536 unit: int SceneGetGridSize() file: layer1/Scene.cpp start line: 238 end line: 299 size: 61 LOC McCabe index: 18 number of parameters: 2 id: 537 unit: void SceneToViewElem() file: layer1/Scene.cpp start line: 610 end line: 682 size: 61 LOC McCabe index: 8 number of parameters: 3 id: 538 unit: int WordMatchCommaExact() file: layer0/Word.cpp start line: 870 end line: 939 size: 61 LOC McCabe index: 27 number of parameters: 4 id: 539 unit: static bool read_atom_site_aniso() file: layer2/CifMoleculeReader.cpp start line: 1583 end line: 1662 size: 61 LOC McCabe index: 10 number of parameters: 3 id: 540 unit: static int RepCylBondCGOGenerate() file: layer2/RepCylBond.cpp start line: 115 end line: 176 size: 61 LOC McCabe index: 19 number of parameters: 2 id: 541 unit: int EditorTorsion() file: layer3/Editor.cpp start line: 689 end line: 758 size: 61 LOC McCabe index: 13 number of parameters: 2 id: 542 unit: def generateApbsInputFile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 61 LOC McCabe index: 10 number of parameters: 1 id: 543 unit: void ObjectPrepareContext() file: layer1/PyMOLObject.cpp start line: 997 end line: 1065 size: 60 LOC McCabe index: 13 number of parameters: 2 id: 544 unit: static int get_mcscf() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2039 end line: 2112 size: 60 LOC McCabe index: 10 number of parameters: 1 id: 545 unit: static void RepCartoonRender() file: layer2/RepCartoon.cpp start line: 246 end line: 309 size: 60 LOC McCabe index: 21 number of parameters: 2 id: 546 unit: def torus() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 60 LOC McCabe index: 6 number of parameters: 3 id: 547 unit: def _complete() file: modules/pymol/parser.py start line: 0 end line: 0 size: 60 LOC McCabe index: 19 number of parameters: 2 id: 548 unit: void SceneRotateScaled() file: layer1/Scene.cpp start line: 1140 end line: 1204 size: 59 LOC McCabe index: 8 number of parameters: 5 id: 549 unit: static void compute_background_for_pixel() file: layer1/Ray.cpp start line: 290 end line: 352 size: 59 LOC McCabe index: 10 number of parameters: 14 id: 550 unit: void RayRenderVRML1() file: layer1/Ray.cpp start line: 1167 end line: 1235 size: 59 LOC McCabe index: 7 number of parameters: 9 id: 551 unit: int CRay::customCylinder3fv() file: layer1/Ray.cpp start line: 6966 end line: 7034 size: 59 LOC McCabe index: 5 number of parameters: 7 id: 552 unit: void ColorDef() file: layer1/Color.cpp start line: 579 end line: 647 size: 59 LOC McCabe index: 11 number of parameters: 5 id: 553 unit: int ObjectFromPyList() file: layer1/PyMOLObject.cpp start line: 735 end line: 796 size: 59 LOC McCabe index: 28 number of parameters: 3 id: 554 unit: int write_structure() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1883 end line: 1949 size: 59 LOC McCabe index: 13 number of parameters: 3 id: 555 unit: static void RenderSphereMode_Immediate_1_2_3() file: layer2/RepSphereImmediate.cpp start line: 162 end line: 226 size: 59 LOC McCabe index: 15 number of parameters: 7 id: 556 unit: static void RepEllipsoidRender() file: layer2/RepEllipsoid.cpp start line: 50 end line: 113 size: 59 LOC McCabe index: 16 number of parameters: 2 id: 557 unit: static int SolventDotGetDotsAroundVertexInSphere() file: layer2/RepSurface.cpp start line: 4490 end line: 4548 size: 59 LOC McCabe index: 21 number of parameters: 15 id: 558 unit: static void MainDrawLocked() file: layer5/main.cpp start line: 530 end line: 627 size: 59 LOC McCabe index: 17 number of parameters: 1 id: 559 unit: def file_fetch_pdb() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 59 LOC McCabe index: 10 number of parameters: 1 id: 560 unit: def minimize() file: modules/chempy/tinker/state.py start line: 0 end line: 0 size: 59 LOC McCabe index: 13 number of parameters: 5 id: 561 unit: int ColorExtFromPyList() file: layer1/Color.cpp start line: 418 end line: 482 size: 58 LOC McCabe index: 14 number of parameters: 3 id: 562 unit: OVstatus OVOneToOne_DelReverse() file: ov/src/OVOneToOne.cpp start line: 336 end line: 405 size: 58 LOC McCabe index: 14 number of parameters: 2 id: 563 unit: OVstatus OVOneToOne_DelForward() file: ov/src/OVOneToOne.cpp start line: 407 end line: 475 size: 58 LOC McCabe index: 14 number of parameters: 2 id: 564 unit: static fio_size_t fio_readv() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 459 end line: 527 size: 58 LOC McCabe index: 16 number of parameters: 3 id: 565 unit: static int read_dx_data() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 260 end line: 334 size: 58 LOC McCabe index: 21 number of parameters: 4 id: 566 unit: int PopUpConvertY() file: layer4/PopUp.cpp start line: 269 end line: 330 size: 58 LOC McCabe index: 19 number of parameters: 3 id: 567 unit: bool MovieSceneOrder() file: layer3/MovieScene.cpp start line: 137 end line: 210 size: 58 LOC McCabe index: 18 number of parameters: 4 id: 568 unit: def load_map_dialog() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 58 LOC McCabe index: 11 number of parameters: 3 id: 569 unit: def parse_pml() file: modules/pmg_qt/syntax/pmlparser.py start line: 0 end line: 0 size: 58 LOC McCabe index: 15 number of parameters: 1 id: 570 unit: def file_save() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 58 LOC McCabe index: 6 number of parameters: 1 id: 571 unit: def __init__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 58 LOC McCabe index: 3 number of parameters: 4 id: 572 unit: int CRay::cylinder3fv() file: layer1/Ray.cpp start line: 6895 end line: 6962 size: 57 LOC McCabe index: 5 number of parameters: 5 id: 573 unit: int MovieCopyFrame() file: layer1/Movie.cpp start line: 330 end line: 388 size: 57 LOC McCabe index: 13 number of parameters: 6 id: 574 unit: void CrystalUpdate() file: layer0/Crystal.cpp start line: 105 end line: 175 size: 57 LOC McCabe index: 9 number of parameters: 1 id: 575 unit: static int animate_normal_mode() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4772 end line: 4844 size: 57 LOC McCabe index: 7 number of parameters: 2 id: 576 unit: static void ObjectGadgetRampCalculate() file: layer2/ObjectGadgetRamp.cpp start line: 57 end line: 117 size: 57 LOC McCabe index: 11 number of parameters: 3 id: 577 unit: static void RepValence() file: layer2/RepWireBond.cpp start line: 78 end line: 139 size: 57 LOC McCabe index: 7 number of parameters: 20 id: 578 unit: int ObjectMoleculeGetNearestAtomIndex() file: layer2/ObjectMolecule2.cpp start line: 655 end line: 711 size: 57 LOC McCabe index: 16 number of parameters: 5 id: 579 unit: def _legacy_scene() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 57 LOC McCabe index: 14 number of parameters: 13 id: 580 unit: void PConvertOptions() file: layer1/P.cpp start line: 2018 end line: 2075 size: 56 LOC McCabe index: 4 number of parameters: 2 id: 581 unit: int ControlSdofIterate() file: layer1/Control.cpp start line: 146 end line: 216 size: 56 LOC McCabe index: 6 number of parameters: 1 id: 582 unit: void MovieCopyPrepare() file: layer1/Movie.cpp start line: 256 end line: 320 size: 56 LOC McCabe index: 14 number of parameters: 4 id: 583 unit: static int read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 952 end line: 1030 size: 56 LOC McCabe index: 13 number of parameters: 3 id: 584 unit: static void RepSphereRender() file: layer2/RepSphere.cpp start line: 175 end line: 237 size: 56 LOC McCabe index: 13 number of parameters: 2 id: 585 unit: int CartoonExtrudeDumbbell() file: layer2/RepCartoon.cpp start line: 2371 end line: 2430 size: 56 LOC McCabe index: 22 number of parameters: 10 id: 586 unit: void CoordSetAdjustAtmIdx() file: layer2/CoordSet.cpp start line: 323 end line: 385 size: 56 LOC McCabe index: 14 number of parameters: 3 id: 587 unit: static void ObjectSurfaceRenderOpaque() file: layer2/ObjectSurface.cpp start line: 761 end line: 817 size: 56 LOC McCabe index: 12 number of parameters: 3 id: 588 unit: int ObjectMoleculeGetPrioritizedOther() file: layer2/ObjectMolecule2.cpp start line: 713 end line: 770 size: 56 LOC McCabe index: 15 number of parameters: 4 id: 589 unit: void PyMOL_Start() file: layer5/PyMOL.cpp start line: 2030 end line: 2100 size: 56 LOC McCabe index: 3 number of parameters: 1 id: 590 unit: int PyMOL_Idle() file: layer5/PyMOL.cpp start line: 2546 end line: 2618 size: 56 LOC McCabe index: 15 number of parameters: 1 id: 591 unit: pymol::vla MoleculeExporterGetStr() file: layer3/MoleculeExporter.cpp start line: 1399 end line: 1465 size: 56 LOC McCabe index: 14 number of parameters: 8 id: 592 unit: int SettingStringToTypedValue() file: layer1/Setting.cpp start line: 1264 end line: 1321 size: 55 LOC McCabe index: 16 number of parameters: 5 id: 593 unit: int CRay::sausage3fv() file: layer1/Ray.cpp start line: 7133 end line: 7198 size: 55 LOC McCabe index: 5 number of parameters: 5 id: 594 unit: int main() file: contrib/champ/list.c start line: 27 end line: 86 size: 55 LOC McCabe index: 9 number of parameters: 2 id: 595 unit: static int get_population() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 3963 end line: 4027 size: 55 LOC McCabe index: 7 number of parameters: 2 id: 596 unit: static int read_g96_structure() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 317 end line: 400 size: 55 LOC McCabe index: 15 number of parameters: 3 id: 597 unit: static int gro_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1108 end line: 1179 size: 55 LOC McCabe index: 15 number of parameters: 2 id: 598 unit: int CoordSetMerge() file: layer2/CoordSet.cpp start line: 389 end line: 445 size: 55 LOC McCabe index: 15 number of parameters: 3 id: 599 unit: void RepLabelRenderRay() file: layer2/RepLabel.cpp start line: 1110 end line: 1170 size: 55 LOC McCabe index: 9 number of parameters: 2 id: 600 unit: void ObjectSliceDrag() file: layer2/ObjectSlice.cpp start line: 714 end line: 780 size: 55 LOC McCabe index: 12 number of parameters: 6 id: 601 unit: void RepNonbondedRenderImmediate() file: layer2/RepNonbonded.cpp start line: 51 end line: 112 size: 55 LOC McCabe index: 12 number of parameters: 2 id: 602 unit: int ExportCoordsImport() file: layer4/Export.cpp start line: 88 end line: 147 size: 55 LOC McCabe index: 12 number of parameters: 5 id: 603 unit: def adapt_to_hardware() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 55 LOC McCabe index: 1 number of parameters: 1 id: 604 unit: int SceneMakeMovieImage() file: layer1/Scene.cpp start line: 2188 end line: 2246 size: 54 LOC McCabe index: 11 number of parameters: 6 id: 605 unit: int SettingSetFromString() file: layer1/Setting.cpp start line: 1323 end line: 1380 size: 54 LOC McCabe index: 16 number of parameters: 4 id: 606 unit: void ObjectAdjustStateRebuildRange() file: layer1/PyMOLObject.cpp start line: 551 end line: 609 size: 54 LOC McCabe index: 19 number of parameters: 3 id: 607 unit: int TrackerNewIter() file: layer0/Tracker.cpp start line: 264 end line: 317 size: 54 LOC McCabe index: 16 number of parameters: 3 id: 608 unit: static int write_trr_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 551 end line: 617 size: 54 LOC McCabe index: 23 number of parameters: 2 id: 609 unit: static int read_parm7_structure() file: contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp start line: 59 end line: 123 size: 54 LOC McCabe index: 22 number of parameters: 3 id: 610 unit: void get_stored_item() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1972 end line: 2025 size: 54 LOC McCabe index: 9 number of parameters: 5 id: 611 unit: static int GEO_read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 542 end line: 631 size: 54 LOC McCabe index: 16 number of parameters: 3 id: 612 unit: static int DEN_read_volumetric_data() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 884 end line: 976 size: 54 LOC McCabe index: 19 number of parameters: 4 id: 613 unit: static int read_rst_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c start line: 142 end line: 205 size: 54 LOC McCabe index: 13 number of parameters: 3 id: 614 unit: bool MMTF_unpack_from_msgpack_object() file: contrib/mmtf-c/mmtf_parser.cpp start line: 915 end line: 977 size: 54 LOC McCabe index: 4 number of parameters: 2 id: 615 unit: static void RenderSphereMode_Immediate_Triangles() file: layer2/RepSphereImmediate.cpp start line: 103 end line: 160 size: 54 LOC McCabe index: 8 number of parameters: 5 id: 616 unit: void ObjectSliceDrawSlice() file: layer2/ObjectSlice.cpp start line: 835 end line: 899 size: 54 LOC McCabe index: 10 number of parameters: 4 id: 617 unit: def read_output_list() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 54 LOC McCabe index: 19 number of parameters: 2 id: 618 unit: void SceneSetView() file: layer1/Scene.cpp start line: 931 end line: 988 size: 53 LOC McCabe index: 10 number of parameters: 5 id: 619 unit: void OrthoPasteIn() file: layer1/Ortho.cpp start line: 2728 end line: 2782 size: 53 LOC McCabe index: 14 number of parameters: 2 id: 620 unit: void FieldInterpolate3f() file: layer0/Field.cpp start line: 312 end line: 371 size: 53 LOC McCabe index: 10 number of parameters: 4 id: 621 unit: static void Reload() file: ov/src/OVOneToOne.cpp start line: 96 end line: 151 size: 53 LOC McCabe index: 8 number of parameters: 1 id: 622 unit: static int read_pdb_structure() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 131 end line: 201 size: 53 LOC McCabe index: 10 number of parameters: 3 id: 623 unit: static void close_gamess_read() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 844 end line: 900 size: 53 LOC McCabe index: 6 number of parameters: 1 id: 624 unit: static int read_brix_data() file: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp start line: 205 end line: 278 size: 53 LOC McCabe index: 12 number of parameters: 4 id: 625 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1476 end line: 1558 size: 53 LOC McCabe index: 5 number of parameters: 2 id: 626 unit: static int write_mol2_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 406 end line: 477 size: 53 LOC McCabe index: 7 number of parameters: 2 id: 627 unit: static int POT_read_volumetric_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 979 end line: 1054 size: 53 LOC McCabe index: 18 number of parameters: 3 id: 628 unit: static void RepSphereSetNormalForSphere() file: layer2/RepSphere.cpp start line: 432 end line: 485 size: 53 LOC McCabe index: 10 number of parameters: 9 id: 629 unit: static bool read_pdbx_poly_seq_scheme() file: layer2/CifMoleculeReader.cpp start line: 1256 end line: 1327 size: 53 LOC McCabe index: 14 number of parameters: 4 id: 630 unit: int GadgetSetFromPyList() file: layer2/GadgetSet.cpp start line: 90 end line: 155 size: 53 LOC McCabe index: 27 number of parameters: 4 id: 631 unit: int ObjectMoleculeNewFromPyList() file: layer2/ObjectMolecule2.cpp start line: 3856 end line: 3917 size: 53 LOC McCabe index: 20 number of parameters: 3 id: 632 unit: def filename_to_format() file: modules/pymol/importing.py start line: 0 end line: 0 size: 53 LOC McCabe index: 21 number of parameters: 1 id: 633 unit: def __init__() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 53 LOC McCabe index: 4 number of parameters: 2 id: 634 unit: int PLockAPIAsGlut() file: layer1/P.cpp start line: 1486 end line: 1555 size: 52 LOC McCabe index: 4 number of parameters: 2 id: 635 unit: void SceneRenderAA() file: layer1/SceneRender.cpp start line: 543 end line: 596 size: 52 LOC McCabe index: 10 number of parameters: 1 id: 636 unit: static void find_axis() file: layer0/Vector.cpp start line: 1925 end line: 2008 size: 52 LOC McCabe index: 11 number of parameters: 2 id: 637 unit: static int read_vtk_data_ex() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 335 end line: 402 size: 52 LOC McCabe index: 10 number of parameters: 2 id: 638 unit: double get_item_value() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1799 end line: 1852 size: 52 LOC McCabe index: 9 number of parameters: 2 id: 639 unit: void store_item() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2178 end line: 2230 size: 52 LOC McCabe index: 9 number of parameters: 5 id: 640 unit: static int handle_wrapped_v2() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1296 end line: 1358 size: 52 LOC McCabe index: 14 number of parameters: 4 id: 641 unit: int VFontLoad() file: layer2/VFont.cpp start line: 289 end line: 342 size: 52 LOC McCabe index: 11 number of parameters: 5 id: 642 unit: static bool MovieSceneStore() file: layer3/MovieScene.cpp start line: 224 end line: 304 size: 52 LOC McCabe index: 15 number of parameters: 9 id: 643 unit: def do() file: modules/chempy/tinker/__init__.py start line: 0 end line: 0 size: 52 LOC McCabe index: 18 number of parameters: 6 id: 644 unit: def fromList() file: modules/chempy/mmd.py start line: 0 end line: 0 size: 52 LOC McCabe index: 11 number of parameters: 2 id: 645 unit: static void SceneUpdateCameraRock() file: layer1/Scene.cpp start line: 2250 end line: 2305 size: 51 LOC McCabe index: 10 number of parameters: 2 id: 646 unit: int SceneRenderCached() file: layer1/Scene.cpp start line: 6544 end line: 6600 size: 51 LOC McCabe index: 16 number of parameters: 1 id: 647 unit: static int balbak_() file: layer0/Matrix.cpp start line: 2045 end line: 2209 size: 51 LOC McCabe index: 11 number of parameters: 7 id: 648 unit: static OVstatus Recondition() file: ov/src/OVOneToOne.cpp start line: 234 end line: 289 size: 51 LOC McCabe index: 13 number of parameters: 3 id: 649 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 1227 end line: 1283 size: 51 LOC McCabe index: 1 number of parameters: 0 id: 650 unit: static int psf_get_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 285 end line: 347 size: 51 LOC McCabe index: 13 number of parameters: 6 id: 651 unit: static int read_angles() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 646 end line: 708 size: 51 LOC McCabe index: 5 number of parameters: 15 id: 652 unit: static int read_vaspxml_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c start line: 120 end line: 189 size: 51 LOC McCabe index: 18 number of parameters: 3 id: 653 unit: void header_complete_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 356 end line: 421 size: 51 LOC McCabe index: 10 number of parameters: 1 id: 654 unit: bool DtrReader::init() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1117 end line: 1182 size: 51 LOC McCabe index: 15 number of parameters: 2 id: 655 unit: static int read_avsfield_data() file: contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp start line: 481 end line: 542 size: 51 LOC McCabe index: 10 number of parameters: 4 id: 656 unit: void AtomInfoTypeConverter::copy1() file: layer2/AtomInfoHistory.cpp start line: 18 end line: 73 size: 51 LOC McCabe index: 4 number of parameters: 2 id: 657 unit: static void RepNonbondedSphereRender() file: layer2/RepNonbondedSphere.cpp start line: 61 end line: 113 size: 51 LOC McCabe index: 15 number of parameters: 2 id: 658 unit: void ObjectMapUpdateExtents() file: layer2/ObjectMap.cpp start line: 1673 end line: 1727 size: 51 LOC McCabe index: 10 number of parameters: 1 id: 659 unit: def checkInput() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 51 LOC McCabe index: 20 number of parameters: 1 id: 660 unit: def _do_mutation() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 51 LOC McCabe index: 5 number of parameters: 1 id: 661 unit: def fromList() file: modules/chempy/mol.py start line: 0 end line: 0 size: 51 LOC McCabe index: 8 number of parameters: 2 id: 662 unit: def __init__() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 51 LOC McCabe index: 13 number of parameters: 2 id: 663 unit: int ExtrudeCircle() file: layer1/Extrude.cpp start line: 77 end line: 136 size: 50 LOC McCabe index: 7 number of parameters: 3 id: 664 unit: int PAutoBlock() file: layer1/P.cpp start line: 2589 end line: 2657 size: 50 LOC McCabe index: 3 number of parameters: 1 id: 665 unit: static int SeqFindRowCol() file: layer1/Seq.cpp start line: 65 end line: 115 size: 50 LOC McCabe index: 16 number of parameters: 6 id: 666 unit: void ViewElemDrawBox() file: layer1/View.cpp start line: 107 end line: 156 size: 50 LOC McCabe index: 8 number of parameters: 7 id: 667 unit: static int read_car_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 312 end line: 380 size: 50 LOC McCabe index: 14 number of parameters: 3 id: 668 unit: def edit_colors_dialog() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 50 LOC McCabe index: 9 number of parameters: 1 id: 669 unit: def highlightPython() file: modules/pmg_qt/syntax/python.py start line: 0 end line: 0 size: 50 LOC McCabe index: 5 number of parameters: 5 id: 670 unit: def __init__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 50 LOC McCabe index: 4 number of parameters: 2 id: 671 unit: def __init__() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 50 LOC McCabe index: 9 number of parameters: 2 id: 672 unit: def toList() file: modules/chempy/mol2.py start line: 0 end line: 0 size: 50 LOC McCabe index: 16 number of parameters: 3 id: 673 unit: void BasisGetEllipsoidNormal() file: layer1/Basis.cpp start line: 1416 end line: 1472 size: 49 LOC McCabe index: 5 number of parameters: 4 id: 674 unit: float CharacterInterpolate() file: layer1/Character.cpp start line: 319 end line: 374 size: 49 LOC McCabe index: 9 number of parameters: 3 id: 675 unit: int CSeq::click() file: layer1/Seq.cpp start line: 242 end line: 292 size: 49 LOC McCabe index: 14 number of parameters: 4 id: 676 unit: static void draw_button() file: layer1/Control.cpp start line: 491 end line: 543 size: 49 LOC McCabe index: 2 number of parameters: 7 id: 677 unit: void ObjectMakeValidName() file: layer1/PyMOLObject.cpp start line: 611 end line: 663 size: 49 LOC McCabe index: 24 number of parameters: 1 id: 678 unit: float MapGetSeparation() file: layer0/Map.cpp start line: 736 end line: 803 size: 49 LOC McCabe index: 12 number of parameters: 5 id: 679 unit: static int js_calc_timestep_blocking_info() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 341 end line: 407 size: 49 LOC McCabe index: 6 number of parameters: 1 id: 680 unit: static int get_cor_atom() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 158 end line: 242 size: 49 LOC McCabe index: 6 number of parameters: 7 id: 681 unit: static int read_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 463 end line: 532 size: 49 LOC McCabe index: 11 number of parameters: 5 id: 682 unit: static void RepDistDashCGOGenerate() file: layer2/RepDistDash.cpp start line: 65 end line: 115 size: 49 LOC McCabe index: 15 number of parameters: 1 id: 683 unit: int ObjectMoleculeConvertIDsToIndices() file: layer2/ObjectMolecule2.cpp start line: 1483 end line: 1550 size: 49 LOC McCabe index: 11 number of parameters: 3 id: 684 unit: PyMOLreturn_status PyMOL_CmdRampNew() file: layer5/PyMOL.cpp start line: 1475 end line: 1525 size: 49 LOC McCabe index: 14 number of parameters: 14 id: 685 unit: Array2D Cholesky::solve() file: modules/cealign/src/tnt/jama_cholesky.h start line: 188 end line: 251 size: 49 LOC McCabe index: 16 number of parameters: 1 id: 686 unit: def rainbow() file: modules/pymol/util.py start line: 0 end line: 0 size: 49 LOC McCabe index: 6 number of parameters: 1 id: 687 unit: def toList() file: modules/chempy/gms.py start line: 0 end line: 0 size: 49 LOC McCabe index: 9 number of parameters: 8 id: 688 unit: static void SceneRaySetRayView() file: layer1/SceneRay.cpp start line: 21 end line: 81 size: 48 LOC McCabe index: 6 number of parameters: 6 id: 689 unit: void OrthoSplash() file: layer1/Ortho.cpp start line: 2448 end line: 2513 size: 48 LOC McCabe index: 2 number of parameters: 1 id: 690 unit: static int eltran_() file: layer0/Matrix.cpp start line: 2447 end line: 2610 size: 48 LOC McCabe index: 8 number of parameters: 7 id: 691 unit: void OSMemoryFree() file: contrib/champ/os_memory.c start line: 291 end line: 340 size: 48 LOC McCabe index: 8 number of parameters: 4 id: 692 unit: void write_binary_item() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1866 end line: 1914 size: 48 LOC McCabe index: 9 number of parameters: 5 id: 693 unit: static int DEN_POT_WFK_read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 696 end line: 773 size: 48 LOC McCabe index: 13 number of parameters: 3 id: 694 unit: static int read_xyz_structure() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 92 end line: 149 size: 48 LOC McCabe index: 7 number of parameters: 3 id: 695 unit: static int read_cor_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 295 end line: 355 size: 48 LOC McCabe index: 13 number of parameters: 3 id: 696 unit: static int read_cube_data() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 485 end line: 558 size: 48 LOC McCabe index: 13 number of parameters: 4 id: 697 unit: static int VFontRecLoad() file: layer2/VFont.cpp start line: 176 end line: 225 size: 48 LOC McCabe index: 12 number of parameters: 3 id: 698 unit: static void SeekerRefresh() file: layer3/Seeker.cpp start line: 495 end line: 549 size: 48 LOC McCabe index: 12 number of parameters: 2 id: 699 unit: def _addmenu() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 48 LOC McCabe index: 14 number of parameters: 2 id: 700 unit: def get_prompt() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 48 LOC McCabe index: 26 number of parameters: 1 id: 701 unit: int ExtrudeDumbbell2() file: layer1/Extrude.cpp start line: 418 end line: 474 size: 47 LOC McCabe index: 6 number of parameters: 5 id: 702 unit: int PLabelAtom() file: layer1/P.cpp start line: 1367 end line: 1419 size: 47 LOC McCabe index: 7 number of parameters: 5 id: 703 unit: float ShakerDoPyra() file: layer1/Shaker.cpp start line: 89 end line: 142 size: 47 LOC McCabe index: 7 number of parameters: 12 id: 704 unit: int MapInside() file: layer0/Map.cpp start line: 116 end line: 176 size: 47 LOC McCabe index: 14 number of parameters: 5 id: 705 unit: static int read_vtk_data() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 272 end line: 330 size: 47 LOC McCabe index: 8 number of parameters: 4 id: 706 unit: static void get_xbgf_fields() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 159 end line: 225 size: 47 LOC McCabe index: 1 number of parameters: 15 id: 707 unit: int write_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1952 end line: 2004 size: 47 LOC McCabe index: 6 number of parameters: 8 id: 708 unit: void SideChainHelperMarkNonCartoonBonded() file: layer2/SideChainHelper.cpp start line: 17 end line: 71 size: 47 LOC McCabe index: 20 number of parameters: 5 id: 709 unit: def load_aln_dialog() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 47 LOC McCabe index: 5 number of parameters: 2 id: 710 unit: def file_save_mpeg() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 47 LOC McCabe index: 6 number of parameters: 1 id: 711 unit: def plugin_info_dialog() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 47 LOC McCabe index: 10 number of parameters: 2 id: 712 unit: def apply() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 47 LOC McCabe index: 8 number of parameters: 1 id: 713 unit: def anime() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 47 LOC McCabe index: 4 number of parameters: 2 id: 714 unit: def analyze() file: modules/chempy/tinker/state.py start line: 0 end line: 0 size: 47 LOC McCabe index: 12 number of parameters: 3 id: 715 unit: def from_molobj() file: modules/chempy/models.py start line: 0 end line: 0 size: 47 LOC McCabe index: 13 number of parameters: 2 id: 716 unit: void GridSetRayViewport() file: layer1/Scene.cpp start line: 139 end line: 185 size: 46 LOC McCabe index: 5 number of parameters: 6 id: 717 unit: static int set_list() file: layer1/Setting.cpp start line: 991 end line: 1042 size: 46 LOC McCabe index: 11 number of parameters: 2 id: 718 unit: int SymmetryAttemptGeneration() file: layer1/Symmetry.cpp start line: 121 end line: 173 size: 46 LOC McCabe index: 11 number of parameters: 2 id: 719 unit: int ObjectStatePushAndApplyMatrix() file: layer1/PyMOLObject.cpp start line: 1403 end line: 1451 size: 46 LOC McCabe index: 6 number of parameters: 2 id: 720 unit: int MovieFromPyList() file: layer1/Movie.cpp start line: 495 end line: 543 size: 46 LOC McCabe index: 20 number of parameters: 3 id: 721 unit: static OVstatus Recondition() file: ov/src/OVOneToAny.cpp start line: 182 end line: 232 size: 46 LOC McCabe index: 12 number of parameters: 3 id: 722 unit: static int read_vaspposcar_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 216 end line: 284 size: 46 LOC McCabe index: 11 number of parameters: 3 id: 723 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 611 end line: 668 size: 46 LOC McCabe index: 9 number of parameters: 2 id: 724 unit: virtual void insert_row() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 849 end line: 900 size: 46 LOC McCabe index: 20 number of parameters: 1 id: 725 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 2057 end line: 2114 size: 46 LOC McCabe index: 12 number of parameters: 2 id: 726 unit: static bool add_missing_ca() file: layer2/CifMoleculeReader.cpp start line: 1383 end line: 1441 size: 46 LOC McCabe index: 14 number of parameters: 3 id: 727 unit: int DistSetMoveWithObject() file: layer2/DistSet.cpp start line: 92 end line: 149 size: 46 LOC McCabe index: 15 number of parameters: 2 id: 728 unit: void CoordSet::fFree() file: layer2/CoordSet.cpp start line: 1670 end line: 1717 size: 46 LOC McCabe index: 12 number of parameters: 0 id: 729 unit: static int RepWireBondCGOGenerate() file: layer2/RepWireBond.cpp start line: 355 end line: 405 size: 46 LOC McCabe index: 19 number of parameters: 2 id: 730 unit: static int SurfaceJobRefineAddNewVerticesCheckPoint() file: layer2/RepSurface.cpp start line: 3376 end line: 3428 size: 46 LOC McCabe index: 11 number of parameters: 10 id: 731 unit: void drawLineToPointInWorldCrossClip() file: layer2/RepLabel.cpp start line: 333 end line: 388 size: 46 LOC McCabe index: 7 number of parameters: 12 id: 732 unit: static void RepNonbondedRender() file: layer2/RepNonbonded.cpp start line: 191 end line: 239 size: 46 LOC McCabe index: 16 number of parameters: 2 id: 733 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 1123 end line: 1175 size: 46 LOC McCabe index: 10 number of parameters: 0 id: 734 unit: def __init__() file: modules/pymol2/cmd2.py start line: 0 end line: 0 size: 46 LOC McCabe index: 3 number of parameters: 3 id: 735 unit: def cap() file: modules/chempy/bmin/util.py start line: 0 end line: 0 size: 46 LOC McCabe index: 3 number of parameters: 1 id: 736 unit: def delete_list() file: modules/chempy/models.py start line: 0 end line: 0 size: 46 LOC McCabe index: 15 number of parameters: 2 id: 737 unit: def read_struct_conn_() file: modules/chempy/cif.py start line: 0 end line: 0 size: 46 LOC McCabe index: 9 number of parameters: 2 id: 738 unit: bool SettingUniqueSetPyObject() file: layer1/Setting.cpp start line: 434 end line: 483 size: 45 LOC McCabe index: 10 number of parameters: 4 id: 739 unit: void UtilSortInPlace() file: layer0/Util.cpp start line: 501 end line: 547 size: 45 LOC McCabe index: 7 number of parameters: 5 id: 740 unit: xx_boolean xx_matrix_invert() file: layer0/Matrix.cpp start line: 338 end line: 386 size: 45 LOC McCabe index: 15 number of parameters: 3 id: 741 unit: static void Reload() file: ov/src/OVOneToAny.cpp start line: 92 end line: 139 size: 45 LOC McCabe index: 8 number of parameters: 1 id: 742 unit: static int read_shell_primitives() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2776 end line: 2842 size: 45 LOC McCabe index: 10 number of parameters: 5 id: 743 unit: static int get_cart_hessian() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4350 end line: 4428 size: 45 LOC McCabe index: 8 number of parameters: 1 id: 744 unit: static int trx_header() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1189 end line: 1274 size: 45 LOC McCabe index: 31 number of parameters: 2 id: 745 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 689 end line: 736 size: 45 LOC McCabe index: 1 number of parameters: 0 id: 746 unit: static int read_pqr_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 285 end line: 335 size: 45 LOC McCabe index: 13 number of parameters: 3 id: 747 unit: static int SurfaceJobRefineAddNewVertices() file: layer2/RepSurface.cpp start line: 3430 end line: 3474 size: 45 LOC McCabe index: 12 number of parameters: 2 id: 748 unit: static void RepCylBondRender() file: layer2/RepCylBond.cpp start line: 178 end line: 227 size: 45 LOC McCabe index: 13 number of parameters: 2 id: 749 unit: static void ObjectSliceUpdate() file: layer2/ObjectSlice.cpp start line: 665 end line: 712 size: 45 LOC McCabe index: 11 number of parameters: 1 id: 750 unit: bool is_distance_bonded() file: layer2/ObjectMolecule2.cpp start line: 4002 end line: 4060 size: 45 LOC McCabe index: 25 number of parameters: 11 id: 751 unit: int EditorLogState() file: layer3/Editor.cpp start line: 535 end line: 596 size: 45 LOC McCabe index: 14 number of parameters: 2 id: 752 unit: void EditorRemove() file: layer3/Editor.cpp start line: 950 end line: 1004 size: 45 LOC McCabe index: 13 number of parameters: 3 id: 753 unit: def do_pick() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 45 LOC McCabe index: 14 number of parameters: 2 id: 754 unit: def __init__() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 45 LOC McCabe index: 6 number of parameters: 2 id: 755 unit: def ligand_sites() file: modules/pymol/preset.py start line: 0 end line: 0 size: 45 LOC McCabe index: 4 number of parameters: 1 id: 756 unit: def find_torsions() file: data/chempy/sidechains/generate1.py start line: 0 end line: 0 size: 45 LOC McCabe index: 14 number of parameters: 1 id: 757 unit: void SceneRenderPicking() file: layer1/ScenePicking.cpp start line: 498 end line: 545 size: 44 LOC McCabe index: 15 number of parameters: 10 id: 758 unit: void OVOneToOne_Stats() file: ov/src/OVOneToOne.cpp start line: 477 end line: 522 size: 44 LOC McCabe index: 10 number of parameters: 1 id: 759 unit: void ov_utility_zero_range() file: ov/src/ov_utility.cpp start line: 4 end line: 54 size: 44 LOC McCabe index: 6 number of parameters: 2 id: 760 unit: static int get_coordinates() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1583 end line: 1644 size: 44 LOC McCabe index: 11 number of parameters: 4 id: 761 unit: void line3() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 184 end line: 236 size: 44 LOC McCabe index: 16 number of parameters: 2 id: 762 unit: static int read_vaspchgcar_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c start line: 139 end line: 204 size: 44 LOC McCabe index: 8 number of parameters: 3 id: 763 unit: static int read_vaspparchg_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c start line: 139 end line: 204 size: 44 LOC McCabe index: 8 number of parameters: 3 id: 764 unit: static int handle_posn_momentum_v1() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1487 end line: 1537 size: 44 LOC McCabe index: 5 number of parameters: 5 id: 765 unit: bool DtrWriter::init() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1936 end line: 1988 size: 44 LOC McCabe index: 7 number of parameters: 1 id: 766 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 515 end line: 570 size: 44 LOC McCabe index: 9 number of parameters: 2 id: 767 unit: static int read_cube_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 411 end line: 474 size: 44 LOC McCabe index: 9 number of parameters: 3 id: 768 unit: static int read_pdb_record() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 39 end line: 109 size: 44 LOC McCabe index: 16 number of parameters: 2 id: 769 unit: static bool read_entity_poly() file: layer2/CifMoleculeReader.cpp start line: 1189 end line: 1243 size: 44 LOC McCabe index: 15 number of parameters: 3 id: 770 unit: static bool read_ss_() file: layer2/CifMoleculeReader.cpp start line: 1446 end line: 1501 size: 44 LOC McCabe index: 17 number of parameters: 5 id: 771 unit: static int ObjectGadgetRampInterpolateWithSpecial() file: layer2/ObjectGadgetRamp.cpp start line: 301 end line: 350 size: 44 LOC McCabe index: 10 number of parameters: 8 id: 772 unit: static void SurfaceJobCheckInteriorSolventSurface() file: layer2/RepSurface.cpp start line: 3476 end line: 3520 size: 44 LOC McCabe index: 13 number of parameters: 7 id: 773 unit: int CPopUp::release() file: layer4/PopUp.cpp start line: 420 end line: 468 size: 44 LOC McCabe index: 15 number of parameters: 4 id: 774 unit: void MoleculeExporter::execute() file: layer3/MoleculeExporter.cpp start line: 304 end line: 363 size: 44 LOC McCabe index: 14 number of parameters: 2 id: 775 unit: def create_shadertext() file: create_shadertext.py start line: 0 end line: 0 size: 44 LOC McCabe index: 19 number of parameters: 4 id: 776 unit: def set_session() file: modules/pymol/importing.py start line: 0 end line: 0 size: 44 LOC McCabe index: 16 number of parameters: 6 id: 777 unit: def load() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 44 LOC McCabe index: 13 number of parameters: 3 id: 778 unit: def next_res() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 44 LOC McCabe index: 14 number of parameters: 2 id: 779 unit: def polar() file: modules/pymol/menu.py start line: 0 end line: 0 size: 44 LOC McCabe index: 1 number of parameters: 2 id: 780 unit: def launch_XMLRPC() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 44 LOC McCabe index: 4 number of parameters: 3 id: 781 unit: def _clean() file: modules/pymol/computing.py start line: 0 end line: 0 size: 44 LOC McCabe index: 6 number of parameters: 9 id: 782 unit: int ExtrudeOval() file: layer1/Extrude.cpp start line: 138 end line: 189 size: 43 LOC McCabe index: 6 number of parameters: 4 id: 783 unit: void SceneApplyImageGamma() file: layer1/Scene.cpp start line: 6105 end line: 6149 size: 43 LOC McCabe index: 11 number of parameters: 4 id: 784 unit: int CRay::sphere3fv() file: layer1/Ray.cpp start line: 6673 end line: 6726 size: 43 LOC McCabe index: 4 number of parameters: 2 id: 785 unit: int CWizard::click() file: layer1/Wizard.cpp start line: 618 end line: 663 size: 43 LOC McCabe index: 12 number of parameters: 4 id: 786 unit: static int read_pbeq_data() file: contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp start line: 238 end line: 293 size: 43 LOC McCabe index: 10 number of parameters: 4 id: 787 unit: void DDmkdir() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 692 end line: 742 size: 43 LOC McCabe index: 15 number of parameters: 4 id: 788 unit: static int fill_basis_arrays() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1005 end line: 1070 size: 43 LOC McCabe index: 6 number of parameters: 1 id: 789 unit: static size_t createPreintegrationTexture() file: layer2/ObjectVolume.cpp start line: 686 end line: 742 size: 43 LOC McCabe index: 9 number of parameters: 3 id: 790 unit: void ObjectSurfaceDump() file: layer2/ObjectSurface.cpp start line: 252 end line: 295 size: 43 LOC McCabe index: 8 number of parameters: 3 id: 791 unit: static int SurfaceJobEliminateTroublesomeVerticesMark() file: layer2/RepSurface.cpp start line: 3232 end line: 3274 size: 43 LOC McCabe index: 12 number of parameters: 7 id: 792 unit: static void RepAngleRenderImmediate() file: layer2/RepAngle.cpp start line: 158 end line: 202 size: 43 LOC McCabe index: 9 number of parameters: 5 id: 793 unit: bool get_planer_normal_cs() file: layer2/HydrogenAdder.cpp start line: 46 end line: 105 size: 43 LOC McCabe index: 11 number of parameters: 5 id: 794 unit: PyMOLreturn_float_array PyMOL_CmdAlign() file: layer5/PyMOL.cpp start line: 751 end line: 795 size: 43 LOC McCabe index: 6 number of parameters: 16 id: 795 unit: void MainDoReshape() file: layer5/main.cpp start line: 961 end line: 1020 size: 43 LOC McCabe index: 20 number of parameters: 2 id: 796 unit: void EditorActivate() file: layer3/Editor.cpp start line: 1737 end line: 1789 size: 43 LOC McCabe index: 13 number of parameters: 3 id: 797 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 1177 end line: 1230 size: 43 LOC McCabe index: 5 number of parameters: 0 id: 798 unit: def load_mtz_dialog() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 43 LOC McCabe index: 8 number of parameters: 2 id: 799 unit: def execute() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 43 LOC McCabe index: 14 number of parameters: 3 id: 800 unit: def run() file: modules/chempy/tinker/__init__.py start line: 0 end line: 0 size: 43 LOC McCabe index: 15 number of parameters: 5 id: 801 unit: def _recover() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 43 LOC McCabe index: 11 number of parameters: 1 id: 802 unit: OV_STATIC ov_status CacheCreateEntry() file: layer1/P.cpp start line: 1118 end line: 1162 size: 42 LOC McCabe index: 10 number of parameters: 2 id: 803 unit: int SettingUniquePrintAll() file: layer1/Setting.cpp start line: 504 end line: 545 size: 42 LOC McCabe index: 10 number of parameters: 2 id: 804 unit: int ScrollBar::click() file: layer1/ScrollBar.cpp start line: 274 end line: 318 size: 42 LOC McCabe index: 12 number of parameters: 4 id: 805 unit: OVstatus OVOneToAny_DelKey() file: ov/src/OVOneToAny.cpp start line: 279 end line: 328 size: 42 LOC McCabe index: 10 number of parameters: 2 id: 806 unit: static void OVHeap_SortOutput() file: ov/src/OVHeap.cpp start line: 103 end line: 145 size: 42 LOC McCabe index: 12 number of parameters: 3 id: 807 unit: static int write_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 499 end line: 556 size: 42 LOC McCabe index: 10 number of parameters: 2 id: 808 unit: static int fio_open() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 72 end line: 120 size: 42 LOC McCabe index: 8 number of parameters: 3 id: 809 unit: static fio_size_t fio_fwrite() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 529 end line: 583 size: 42 LOC McCabe index: 7 number of parameters: 4 id: 810 unit: static int read_mol2() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 116 end line: 175 size: 42 LOC McCabe index: 11 number of parameters: 3 id: 811 unit: void ObjectGadgetRampUpdate() file: layer2/ObjectGadgetRamp.cpp start line: 858 end line: 900 size: 42 LOC McCabe index: 8 number of parameters: 1 id: 812 unit: int DistSetGetExtent() file: layer2/DistSet.cpp start line: 312 end line: 355 size: 42 LOC McCabe index: 4 number of parameters: 3 id: 813 unit: static void ObjectSurfaceRenderGlobalTransparency() file: layer2/ObjectSurface.cpp start line: 686 end line: 732 size: 42 LOC McCabe index: 7 number of parameters: 5 id: 814 unit: static int SurfaceJobEliminateCloseDotsTypeLessThan3() file: layer2/RepSurface.cpp start line: 3133 end line: 3175 size: 42 LOC McCabe index: 12 number of parameters: 4 id: 815 unit: void ObjectMoleculeFixChemistry() file: layer2/ObjectMolecule2.cpp start line: 1426 end line: 1468 size: 42 LOC McCabe index: 11 number of parameters: 4 id: 816 unit: int ObjectMapStateContainsPoint() file: layer2/ObjectMap.cpp start line: 1052 end line: 1100 size: 42 LOC McCabe index: 20 number of parameters: 2 id: 817 unit: void MainReshape() file: layer5/main.cpp start line: 910 end line: 957 size: 42 LOC McCabe index: 13 number of parameters: 2 id: 818 unit: void MainFree() file: layer5/main.cpp start line: 1049 end line: 1107 size: 42 LOC McCabe index: 8 number of parameters: 1 id: 819 unit: static void EditorDrawDihedral() file: layer3/Editor.cpp start line: 93 end line: 139 size: 42 LOC McCabe index: 10 number of parameters: 1 id: 820 unit: void EditorAttach() file: layer3/Editor.cpp start line: 900 end line: 946 size: 42 LOC McCabe index: 10 number of parameters: 6 id: 821 unit: void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 1069 end line: 1116 size: 42 LOC McCabe index: 1 number of parameters: 0 id: 822 unit: def __init__() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 42 LOC McCabe index: 2 number of parameters: 3 id: 823 unit: def __init__() file: modules/pmg_tk/SetEditor.py start line: 0 end line: 0 size: 42 LOC McCabe index: 7 number of parameters: 2 id: 824 unit: def extract_zipfile() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 42 LOC McCabe index: 16 number of parameters: 2 id: 825 unit: def roving_density() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 42 LOC McCabe index: 2 number of parameters: 2 id: 826 unit: def roving_density() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 42 LOC McCabe index: 2 number of parameters: 2 id: 827 unit: def pick_option() file: modules/pymol/menu.py start line: 0 end line: 0 size: 42 LOC McCabe index: 4 number of parameters: 4 id: 828 unit: void ExtrudeCGOTraceFrame() file: layer1/Extrude.cpp start line: 635 end line: 677 size: 41 LOC McCabe index: 6 number of parameters: 2 id: 829 unit: void SceneCopy() file: layer1/Scene.cpp start line: 6263 end line: 6306 size: 41 LOC McCabe index: 13 number of parameters: 4 id: 830 unit: static ov_size idtf_dump_file_header() file: layer1/Ray.cpp start line: 1833 end line: 1875 size: 41 LOC McCabe index: 1 number of parameters: 2 id: 831 unit: void OrthoNewLine() file: layer1/Ortho.cpp start line: 1132 end line: 1192 size: 41 LOC McCabe index: 11 number of parameters: 3 id: 832 unit: static void OrthoLayoutPanel() file: layer1/Ortho.cpp start line: 2110 end line: 2178 size: 41 LOC McCabe index: 2 number of parameters: 5 id: 833 unit: void OrthoPushMatrix() file: layer1/Ortho.cpp start line: 2638 end line: 2688 size: 41 LOC McCabe index: 8 number of parameters: 1 id: 834 unit: void CShaderMgr::Reload_Shader_Variables() file: layer0/ShaderMgr.cpp start line: 560 end line: 611 size: 41 LOC McCabe index: 11 number of parameters: 0 id: 835 unit: void rotation_matrix3f() file: layer0/Vector.cpp start line: 1567 end line: 1619 size: 41 LOC McCabe index: 4 number of parameters: 5 id: 836 unit: static int get_fmoxyz() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1651 end line: 1708 size: 41 LOC McCabe index: 11 number of parameters: 4 id: 837 unit: static int get_final_properties() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2144 end line: 2207 size: 41 LOC McCabe index: 11 number of parameters: 1 id: 838 unit: static int read_js_angles() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1032 end line: 1079 size: 41 LOC McCabe index: 1 number of parameters: 20 id: 839 unit: static int read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 101 end line: 152 size: 41 LOC McCabe index: 10 number of parameters: 3 id: 840 unit: void ReadPARM::get_parm_atom() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 876 end line: 923 size: 41 LOC McCabe index: 9 number of parameters: 8 id: 841 unit: static void get_pdb_conect() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 207 end line: 257 size: 41 LOC McCabe index: 9 number of parameters: 7 id: 842 unit: static void get_pdb_fields() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 284 end line: 344 size: 41 LOC McCabe index: 3 number of parameters: 16 id: 843 unit: void DistSet::render() file: layer2/DistSet.cpp start line: 428 end line: 469 size: 41 LOC McCabe index: 12 number of parameters: 1 id: 844 unit: int CoordSet::extendIndices() file: layer2/CoordSet.cpp start line: 1570 end line: 1611 size: 41 LOC McCabe index: 14 number of parameters: 1 id: 845 unit: static int sshash_register_rec() file: layer2/ObjectMolecule2.cpp start line: 1853 end line: 1908 size: 41 LOC McCabe index: 7 number of parameters: 8 id: 846 unit: def paintAxes() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 41 LOC McCabe index: 6 number of parameters: 3 id: 847 unit: def plot_axis() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 41 LOC McCabe index: 10 number of parameters: 1 id: 848 unit: def __init__() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 41 LOC McCabe index: 3 number of parameters: 2 id: 849 unit: def parse_array() file: modules/chempy/mae.py start line: 0 end line: 0 size: 41 LOC McCabe index: 16 number of parameters: 2 id: 850 unit: void SceneRenderRayVolume() file: layer1/SceneRay.cpp start line: 784 end line: 826 size: 40 LOC McCabe index: 9 number of parameters: 2 id: 851 unit: void GridSetGLViewport() file: layer1/SceneRender.cpp start line: 101 end line: 141 size: 40 LOC McCabe index: 5 number of parameters: 2 id: 852 unit: int MapInsideXY() file: layer0/Map.cpp start line: 178 end line: 224 size: 40 LOC McCabe index: 12 number of parameters: 5 id: 853 unit: int ChampUniqueListNew() file: contrib/champ/champ.c start line: 1842 end line: 1886 size: 40 LOC McCabe index: 5 number of parameters: 3 id: 854 unit: static int get_gradient() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4083 end line: 4134 size: 40 LOC McCabe index: 6 number of parameters: 2 id: 855 unit: static int vtf_parse_bond() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 662 end line: 715 size: 40 LOC McCabe index: 8 number of parameters: 2 id: 856 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1205 end line: 1246 size: 40 LOC McCabe index: 5 number of parameters: 2 id: 857 unit: static int handle_wrapped_v1() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1539 end line: 1587 size: 40 LOC McCabe index: 5 number of parameters: 4 id: 858 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2316 end line: 2364 size: 40 LOC McCabe index: 8 number of parameters: 2 id: 859 unit: static int xtc_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1593 end line: 1649 size: 40 LOC McCabe index: 23 number of parameters: 2 id: 860 unit: void write_ct_pseudos() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1497 end line: 1537 size: 40 LOC McCabe index: 5 number of parameters: 5 id: 861 unit: int AtomInfoCompareAll() file: layer2/AtomInfo.cpp start line: 1961 end line: 2008 size: 40 LOC McCabe index: 37 number of parameters: 3 id: 862 unit: int GenerateRepCartoonDrawDebugOrient() file: layer2/RepCartoon.cpp start line: 1599 end line: 1638 size: 40 LOC McCabe index: 9 number of parameters: 5 id: 863 unit: static int ObjectMoleculeConnectComponents() file: layer2/CifMoleculeReader.cpp start line: 447 end line: 506 size: 40 LOC McCabe index: 17 number of parameters: 2 id: 864 unit: int DistSetFromPyList() file: layer2/DistSet.cpp start line: 219 end line: 278 size: 40 LOC McCabe index: 4 number of parameters: 3 id: 865 unit: int CoordSetMoveAtomLabel() file: layer2/CoordSet.cpp start line: 619 end line: 663 size: 40 LOC McCabe index: 6 number of parameters: 4 id: 866 unit: static void RepWireBondRender() file: layer2/RepWireBond.cpp start line: 407 end line: 447 size: 40 LOC McCabe index: 15 number of parameters: 2 id: 867 unit: static int ObjectSliceStateFromPyList() file: layer2/ObjectSlice.cpp start line: 94 end line: 139 size: 40 LOC McCabe index: 16 number of parameters: 3 id: 868 unit: int ObjectMoleculeAutoDisableAtomNameWildcard() file: layer2/ObjectMolecule2.cpp start line: 1595 end line: 1638 size: 40 LOC McCabe index: 10 number of parameters: 1 id: 869 unit: static int ObjectMoleculeTestHBond() file: layer2/ObjectMolecule2.cpp start line: 3254 end line: 3311 size: 40 LOC McCabe index: 8 number of parameters: 5 id: 870 unit: void PyMOL_Stop() file: layer5/PyMOL.cpp start line: 2147 end line: 2188 size: 40 LOC McCabe index: 1 number of parameters: 1 id: 871 unit: static int SeekerFindTag() file: layer3/Seeker.cpp start line: 984 end line: 1023 size: 40 LOC McCabe index: 15 number of parameters: 5 id: 872 unit: void EditorReplace() file: layer3/Editor.cpp start line: 1079 end line: 1118 size: 40 LOC McCabe index: 9 number of parameters: 6 id: 873 unit: this._send_ajax = function() file: modules/web/javascript/pymol.js start line: 63 end line: 102 size: 40 LOC McCabe index: 7 number of parameters: 2 id: 874 unit: def load_traj_dialog() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 40 LOC McCabe index: 3 number of parameters: 2 id: 875 unit: def createButtons() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 40 LOC McCabe index: 1 number of parameters: 1 id: 876 unit: def getApbsInputFile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 40 LOC McCabe index: 2 number of parameters: 23 id: 877 unit: def _multifetch() file: modules/pymol/importing.py start line: 0 end line: 0 size: 40 LOC McCabe index: 19 number of parameters: 12 id: 878 unit: def auto_position() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 40 LOC McCabe index: 5 number of parameters: 3 id: 879 unit: def set_name() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 40 LOC McCabe index: 8 number of parameters: 2 id: 880 unit: def apply() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 40 LOC McCabe index: 7 number of parameters: 1 id: 881 unit: def ligands() file: modules/pymol/preset.py start line: 0 end line: 0 size: 40 LOC McCabe index: 4 number of parameters: 1 id: 882 unit: int ExtrudeComputeTangents() file: layer1/Extrude.cpp start line: 580 end line: 631 size: 39 LOC McCabe index: 4 number of parameters: 1 id: 883 unit: static void ColladaWritePhongEffect() file: layer1/COLLADA.cpp start line: 259 end line: 306 size: 39 LOC McCabe index: 6 number of parameters: 7 id: 884 unit: int MoviePNG() file: layer1/Movie.cpp start line: 887 end line: 939 size: 39 LOC McCabe index: 7 number of parameters: 12 id: 885 unit: void InitializeViewPortToScreenBlock() file: layer1/SceneRender.cpp start line: 1189 end line: 1227 size: 39 LOC McCabe index: 8 number of parameters: 8 id: 886 unit: bool interleaveBufferData() file: layer0/GenericBuffer.h start line: 360 end line: 419 size: 39 LOC McCabe index: 6 number of parameters: 0 id: 887 unit: int pymol_rg_() file: layer0/Matrix.cpp start line: 3984 end line: 4137 size: 39 LOC McCabe index: 4 number of parameters: 10 id: 888 unit: void OSMemoryZero() file: contrib/champ/os_memory.c start line: 47 end line: 90 size: 39 LOC McCabe index: 5 number of parameters: 2 id: 889 unit: static int read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 244 end line: 284 size: 39 LOC McCabe index: 13 number of parameters: 3 id: 890 unit: static int read_crd_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c start line: 74 end line: 128 size: 39 LOC McCabe index: 9 number of parameters: 3 id: 891 unit: void describe_other_properties_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2815 end line: 2863 size: 39 LOC McCabe index: 4 number of parameters: 3 id: 892 unit: static int write_vaspposcar_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 331 end line: 379 size: 39 LOC McCabe index: 8 number of parameters: 2 id: 893 unit: static int write_raw_pdb_record() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 348 end line: 401 size: 39 LOC McCabe index: 6 number of parameters: 16 id: 894 unit: void ObjectVolumeDrawSlice() file: layer2/ObjectVolume.cpp start line: 1030 end line: 1077 size: 39 LOC McCabe index: 8 number of parameters: 4 id: 895 unit: static int GroupOrderKnown() file: layer2/ObjectAlignment.cpp start line: 56 end line: 99 size: 39 LOC McCabe index: 14 number of parameters: 7 id: 896 unit: static int RepSurfaceAddNearByAtomsIfNotSurfaced() file: layer2/RepSurface.cpp start line: 4015 end line: 4053 size: 39 LOC McCabe index: 14 number of parameters: 9 id: 897 unit: static int SolventDotMarkDotsWithinProbeRadius() file: layer2/RepSurface.cpp start line: 4694 end line: 4732 size: 39 LOC McCabe index: 11 number of parameters: 7 id: 898 unit: PyMOLreturn_string_array PyMOL_CmdGetNames() file: layer5/PyMOL.cpp start line: 3151 end line: 3194 size: 39 LOC McCabe index: 7 number of parameters: 4 id: 899 unit: static void SeekerSelectionCenter() file: layer3/Seeker.cpp start line: 290 end line: 329 size: 39 LOC McCabe index: 9 number of parameters: 2 id: 900 unit: static bool MovieSceneRename() file: layer3/MovieScene.cpp start line: 505 end line: 561 size: 39 LOC McCabe index: 10 number of parameters: 3 id: 901 unit: def compile() file: monkeypatch_distutils.py start line: 0 end line: 0 size: 39 LOC McCabe index: 11 number of parameters: 9 id: 902 unit: def execapp() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 39 LOC McCabe index: 3 number of parameters: 0 id: 903 unit: TNT::Array2D solve() file: modules/cealign/src/tnt/jama_qr.h start line: 268 end line: 315 size: 39 LOC McCabe index: 13 number of parameters: 1 id: 904 unit: Matrix solve() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1797 end line: 1844 size: 39 LOC McCabe index: 13 number of parameters: 1 id: 905 unit: def _generatePymolPqrFile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 39 LOC McCabe index: 8 number of parameters: 1 id: 906 unit: def seq_option() file: modules/pymol/menu.py start line: 0 end line: 0 size: 39 LOC McCabe index: 3 number of parameters: 4 id: 907 unit: def model_to_sdf_list() file: modules/pymol/computing.py start line: 0 end line: 0 size: 39 LOC McCabe index: 11 number of parameters: 2 id: 908 unit: def readEntry() file: modules/chempy/cex.py start line: 0 end line: 0 size: 39 LOC McCabe index: 10 number of parameters: 1 id: 909 unit: int ExtrudeAllocPointsNormalsColors() file: layer1/Extrude.cpp start line: 2220 end line: 2258 size: 38 LOC McCabe index: 8 number of parameters: 2 id: 910 unit: int PopPlaceChild() file: layer1/Pop.cpp start line: 114 end line: 154 size: 38 LOC McCabe index: 5 number of parameters: 5 id: 911 unit: int PConvPyListToFloatArrayImpl() file: layer1/PConv.cpp start line: 523 end line: 566 size: 38 LOC McCabe index: 8 number of parameters: 3 id: 912 unit: int PConvPyListToIntArrayImpl() file: layer1/PConv.cpp start line: 661 end line: 703 size: 38 LOC McCabe index: 8 number of parameters: 3 id: 913 unit: static void ColladaWrite3DSource() file: layer1/COLLADA.cpp start line: 414 end line: 457 size: 38 LOC McCabe index: 1 number of parameters: 6 id: 914 unit: static void ProtectIterators() file: layer0/Tracker.cpp start line: 159 end line: 196 size: 38 LOC McCabe index: 10 number of parameters: 2 id: 915 unit: void p_glutHandleEvent() file: layer0/os_gl.cpp start line: 321 end line: 361 size: 38 LOC McCabe index: 17 number of parameters: 1 id: 916 unit: void CShaderMgr::Reload_CallComputeColorForLight() file: layer0/ShaderMgr.cpp start line: 290 end line: 340 size: 38 LOC McCabe index: 6 number of parameters: 0 id: 917 unit: void matrix_to_rotation() file: layer0/Vector.cpp start line: 2010 end line: 2063 size: 38 LOC McCabe index: 7 number of parameters: 3 id: 918 unit: static int FollowActives() file: layer0/Triangle.cpp start line: 1568 end line: 1609 size: 38 LOC McCabe index: 8 number of parameters: 5 id: 919 unit: OVstatus OVLexicon_DecRef() file: ov/src/OVLexicon.cpp start line: 190 end line: 229 size: 38 LOC McCabe index: 13 number of parameters: 2 id: 920 unit: OVreturn_word OVOneToAny_GetKey() file: ov/src/OVOneToAny.cpp start line: 141 end line: 180 size: 38 LOC McCabe index: 5 number of parameters: 2 id: 921 unit: void ChampPatDump() file: contrib/champ/champ.c start line: 4475 end line: 4514 size: 38 LOC McCabe index: 5 number of parameters: 2 id: 922 unit: static int read_car_structure() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 252 end line: 310 size: 38 LOC McCabe index: 8 number of parameters: 3 id: 923 unit: static int read_qm_timestep_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 676 end line: 724 size: 38 LOC McCabe index: 6 number of parameters: 2 id: 924 unit: static int write_js_angles() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1769 end line: 1813 size: 38 LOC McCabe index: 6 number of parameters: 20 id: 925 unit: static int gro_rec() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1048 end line: 1100 size: 38 LOC McCabe index: 9 number of parameters: 2 id: 926 unit: static int read_cube_structure() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 357 end line: 408 size: 38 LOC McCabe index: 4 number of parameters: 3 id: 927 unit: static int read_pqr_structure() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 239 end line: 280 size: 38 LOC McCabe index: 9 number of parameters: 3 id: 928 unit: void RenderSphereMode_Immediate_5() file: layer2/RepSphereImmediate.cpp start line: 60 end line: 100 size: 38 LOC McCabe index: 5 number of parameters: 6 id: 929 unit: void RepSphereRenderImmediate() file: layer2/RepSphereImmediate.cpp start line: 267 end line: 309 size: 38 LOC McCabe index: 9 number of parameters: 2 id: 930 unit: int ObjectGadgetNewFromPyList() file: layer2/ObjectGadget.cpp start line: 325 end line: 367 size: 38 LOC McCabe index: 12 number of parameters: 4 id: 931 unit: void GadgetSet::invalidateRep() file: layer2/GadgetSet.cpp start line: 221 end line: 258 size: 38 LOC McCabe index: 8 number of parameters: 2 id: 932 unit: void SculptCacheStore() file: layer2/SculptCache.cpp start line: 98 end line: 137 size: 38 LOC McCabe index: 10 number of parameters: 7 id: 933 unit: void PyMOL_NeedReshape() file: layer5/PyMOL.cpp start line: 2658 end line: 2705 size: 38 LOC McCabe index: 9 number of parameters: 6 id: 934 unit: void EditorHFill() file: layer3/Editor.cpp start line: 1008 end line: 1048 size: 38 LOC McCabe index: 6 number of parameters: 2 id: 935 unit: bool SeleCoordIterator::next() file: layer3/AtomIterators.cpp start line: 111 end line: 159 size: 38 LOC McCabe index: 16 number of parameters: 0 id: 936 unit: def movePoints() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 38 LOC McCabe index: 17 number of parameters: 2 id: 937 unit: def createConsole() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 38 LOC McCabe index: 3 number of parameters: 1 id: 938 unit: def show_plugin_info_dialog() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 38 LOC McCabe index: 6 number of parameters: 2 id: 939 unit: def save() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 38 LOC McCabe index: 5 number of parameters: 1 id: 940 unit: def do_pick() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 38 LOC McCabe index: 7 number of parameters: 2 id: 941 unit: def fromList() file: modules/chempy/pdb.py start line: 0 end line: 0 size: 38 LOC McCabe index: 11 number of parameters: 2 id: 942 unit: def do() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 38 LOC McCabe index: 12 number of parameters: 6 id: 943 unit: def toList() file: modules/chempy/mmd.py start line: 0 end line: 0 size: 38 LOC McCabe index: 9 number of parameters: 3 id: 944 unit: int PFlush() file: layer1/P.cpp start line: 2492 end line: 2531 size: 37 LOC McCabe index: 8 number of parameters: 1 id: 945 unit: void SceneTranslateSceneXYWithScale() file: layer1/Scene.cpp start line: 7128 end line: 7171 size: 37 LOC McCabe index: 8 number of parameters: 3 id: 946 unit: static void CharacterPurgeOldest() file: layer1/Character.cpp start line: 441 end line: 491 size: 37 LOC McCabe index: 7 number of parameters: 1 id: 947 unit: int ViewIterate() file: layer1/View.cpp start line: 580 end line: 625 size: 37 LOC McCabe index: 13 number of parameters: 4 id: 948 unit: int PConvPyList3ToFloatVLA() file: layer1/PConv.cpp start line: 598 end line: 634 size: 37 LOC McCabe index: 8 number of parameters: 2 id: 949 unit: static void ColladaWriteLibraryCameras() file: layer1/COLLADA.cpp start line: 129 end line: 174 size: 37 LOC McCabe index: 3 number of parameters: 7 id: 950 unit: static void TTTFromViewElem() file: layer1/PyMOLObject.cpp start line: 159 end line: 202 size: 37 LOC McCabe index: 4 number of parameters: 2 id: 951 unit: int WordCompare() file: layer0/Word.cpp start line: 56 end line: 95 size: 37 LOC McCabe index: 18 number of parameters: 4 id: 952 unit: void reorient44d() file: layer0/Vector.cpp start line: 1363 end line: 1407 size: 37 LOC McCabe index: 2 number of parameters: 1 id: 953 unit: float MatrixGetRMS() file: layer0/Matrix.cpp start line: 988 end line: 1029 size: 37 LOC McCabe index: 9 number of parameters: 5 id: 954 unit: void SphereInit() file: layer0/Sphere.cpp start line: 264 end line: 304 size: 37 LOC McCabe index: 4 number of parameters: 1 id: 955 unit: __inline__ static int WordCompare() file: layer0/Word.h start line: 96 end line: 135 size: 37 LOC McCabe index: 18 number of parameters: 4 id: 956 unit: void setup_other_props() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 961 end line: 1023 size: 37 LOC McCabe index: 10 number of parameters: 2 id: 957 unit: static int read_mol2_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 538 end line: 578 size: 37 LOC McCabe index: 6 number of parameters: 8 id: 958 unit: static int POT_read_volumetric_data() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1057 end line: 1119 size: 37 LOC McCabe index: 11 number of parameters: 4 id: 959 unit: static int read_pqr_record() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 46 end line: 100 size: 37 LOC McCabe index: 9 number of parameters: 2 id: 960 unit: int AtomInfoSequential() file: layer2/AtomInfo.cpp start line: 2150 end line: 2186 size: 37 LOC McCabe index: 13 number of parameters: 4 id: 961 unit: void ComputeCartoonAtomColors() file: layer2/RepCartoon.cpp start line: 2082 end line: 2126 size: 37 LOC McCabe index: 16 number of parameters: 18 id: 962 unit: void RenderImmediate_DoPreGL() file: layer2/RepSphereImmediate.cpp start line: 228 end line: 264 size: 37 LOC McCabe index: 6 number of parameters: 6 id: 963 unit: static int SurfaceJobAtomProximityCleanupPass() file: layer2/RepSurface.cpp start line: 3313 end line: 3349 size: 37 LOC McCabe index: 10 number of parameters: 5 id: 964 unit: int ObjectMapNewCopy() file: layer2/ObjectMap.cpp start line: 1599 end line: 1636 size: 37 LOC McCabe index: 11 number of parameters: 5 id: 965 unit: int EditorFromPyList() file: layer3/Editor.cpp start line: 410 end line: 449 size: 37 LOC McCabe index: 12 number of parameters: 2 id: 966 unit: def load_dialog() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 37 LOC McCabe index: 14 number of parameters: 3 id: 967 unit: def update_maps() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 37 LOC McCabe index: 17 number of parameters: 2 id: 968 unit: def exec_deferred() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 37 LOC McCabe index: 11 number of parameters: 1 id: 969 unit: def fromList() file: modules/chempy/mae.py start line: 0 end line: 0 size: 37 LOC McCabe index: 12 number of parameters: 2 id: 970 unit: def toList() file: modules/chempy/mol.py start line: 0 end line: 0 size: 37 LOC McCabe index: 13 number of parameters: 2 id: 971 unit: def amber99() file: modules/chempy/champ/assign.py start line: 0 end line: 0 size: 37 LOC McCabe index: 14 number of parameters: 1 id: 972 unit: def add_bonds() file: modules/chempy/hetatm.py start line: 0 end line: 0 size: 37 LOC McCabe index: 15 number of parameters: 3 id: 973 unit: def parse_cif() file: modules/chempy/cif.py start line: 0 end line: 0 size: 37 LOC McCabe index: 12 number of parameters: 1 id: 974 unit: static int LineClipPoint() file: layer1/Basis.cpp start line: 1184 end line: 1240 size: 36 LOC McCabe index: 5 number of parameters: 6 id: 975 unit: void GridUpdate() file: layer1/Scene.cpp start line: 195 end line: 230 size: 36 LOC McCabe index: 7 number of parameters: 4 id: 976 unit: static void matrix_interpolate() file: layer1/View.cpp start line: 627 end line: 689 size: 36 LOC McCabe index: 3 number of parameters: 10 id: 977 unit: int CControl::click() file: layer1/Control.cpp start line: 454 end line: 489 size: 36 LOC McCabe index: 6 number of parameters: 4 id: 978 unit: void WizardSet() file: layer1/Wizard.cpp start line: 269 end line: 309 size: 36 LOC McCabe index: 14 number of parameters: 3 id: 979 unit: int TrackerIterNextCandInList() file: layer0/Tracker.cpp start line: 429 end line: 465 size: 36 LOC McCabe index: 8 number of parameters: 3 id: 980 unit: int TrackerIterNextListInCand() file: layer0/Tracker.cpp start line: 467 end line: 503 size: 36 LOC McCabe index: 8 number of parameters: 3 id: 981 unit: float FieldInterpolatef() file: layer0/Field.cpp start line: 238 end line: 290 size: 36 LOC McCabe index: 9 number of parameters: 7 id: 982 unit: int ChampMatch() file: contrib/champ/champ.c start line: 2089 end line: 2132 size: 36 LOC McCabe index: 7 number of parameters: 7 id: 983 unit: static void write_seqres() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 417 end line: 454 size: 36 LOC McCabe index: 8 number of parameters: 3 id: 984 unit: static int get_final_gradient() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4139 end line: 4185 size: 36 LOC McCabe index: 6 number of parameters: 2 id: 985 unit: static int read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c start line: 106 end line: 154 size: 36 LOC McCabe index: 8 number of parameters: 3 id: 986 unit: static int read_tinker_structure() file: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c start line: 78 end line: 117 size: 36 LOC McCabe index: 4 number of parameters: 3 id: 987 unit: static int read_edm_data() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 203 end line: 248 size: 36 LOC McCabe index: 6 number of parameters: 4 id: 988 unit: static int read_xsf_data() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 847 end line: 891 size: 36 LOC McCabe index: 11 number of parameters: 4 id: 989 unit: void alchemical_combine() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1595 end line: 1643 size: 36 LOC McCabe index: 10 number of parameters: 1 id: 990 unit: void RepCartoonComputeDifferencesAndNormals() file: layer2/RepCartoon.cpp start line: 3157 end line: 3193 size: 36 LOC McCabe index: 6 number of parameters: 8 id: 991 unit: static void ObjectSurfaceInvalidate() file: layer2/ObjectSurface.cpp start line: 297 end line: 332 size: 36 LOC McCabe index: 13 number of parameters: 4 id: 992 unit: static int SurfaceJobEliminateTroublesomeVertices() file: layer2/RepSurface.cpp start line: 3276 end line: 3311 size: 36 LOC McCabe index: 12 number of parameters: 2 id: 993 unit: void PyMOL_SetDefaultMouse() file: layer5/PyMOL.cpp start line: 3096 end line: 3141 size: 36 LOC McCabe index: 3 number of parameters: 1 id: 994 unit: def __init__() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 36 LOC McCabe index: 5 number of parameters: 1 id: 995 unit: def SettingAction() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 36 LOC McCabe index: 6 number of parameters: 7 id: 996 unit: def mouseReleaseEvent() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 36 LOC McCabe index: 16 number of parameters: 2 id: 997 unit: def __init__() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 36 LOC McCabe index: 2 number of parameters: 5 id: 998 unit: def fancysplit() file: modules/pmg_qt/syntax/pmlparser.py start line: 0 end line: 0 size: 36 LOC McCabe index: 19 number of parameters: 5 id: 999 unit: def list_to_str_list() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 36 LOC McCabe index: 12 number of parameters: 3 id: 1000 unit: def __init__() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 36 LOC McCabe index: 2 number of parameters: 4 id: 1001 unit: def set_browse() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 36 LOC McCabe index: 12 number of parameters: 2 id: 1002 unit: def update_selections() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 36 LOC McCabe index: 5 number of parameters: 1 id: 1003 unit: def assign() file: modules/chempy/tinker/realtime.py start line: 0 end line: 0 size: 36 LOC McCabe index: 7 number of parameters: 2 id: 1004 unit: int ScenePNG() file: layer1/Scene.cpp start line: 1904 end line: 1939 size: 35 LOC McCabe index: 10 number of parameters: 6 id: 1005 unit: void ScenePrepareMatrix() file: layer1/Scene.cpp start line: 6907 end line: 6949 size: 35 LOC McCabe index: 4 number of parameters: 2 id: 1006 unit: static void RayApplyContextToVertex() file: layer1/Ray.cpp start line: 163 end line: 204 size: 35 LOC McCabe index: 4 number of parameters: 2 id: 1007 unit: void RayProjectTriangle() file: layer1/Ray.cpp start line: 2857 end line: 2895 size: 35 LOC McCabe index: 7 number of parameters: 6 id: 1008 unit: int WizardDoPosition() file: layer1/Wizard.cpp start line: 403 end line: 437 size: 35 LOC McCabe index: 12 number of parameters: 2 id: 1009 unit: int PConvPyListToLabPosVLA() file: layer1/PConv.cpp start line: 1156 end line: 1190 size: 35 LOC McCabe index: 15 number of parameters: 2 id: 1010 unit: void UtilSortIndex() file: layer0/Util.cpp start line: 321 end line: 356 size: 35 LOC McCabe index: 12 number of parameters: 4 id: 1011 unit: void UtilSortIndexGlobals() file: layer0/Util.cpp start line: 358 end line: 393 size: 35 LOC McCabe index: 12 number of parameters: 5 id: 1012 unit: void CShaderMgr::bindOffscreen() file: layer0/ShaderMgr.cpp start line: 1791 end line: 1833 size: 35 LOC McCabe index: 6 number of parameters: 3 id: 1013 unit: void multiply44d44d44d() file: layer0/Vector.cpp start line: 983 end line: 1024 size: 35 LOC McCabe index: 1 number of parameters: 3 id: 1014 unit: void left_multiply44d44d() file: layer0/Vector.cpp start line: 1026 end line: 1067 size: 35 LOC McCabe index: 1 number of parameters: 2 id: 1015 unit: void right_multiply44d44d() file: layer0/Vector.cpp start line: 1069 end line: 1111 size: 35 LOC McCabe index: 1 number of parameters: 2 id: 1016 unit: void multiply44f44f44f() file: layer0/Vector.cpp start line: 1113 end line: 1154 size: 35 LOC McCabe index: 1 number of parameters: 3 id: 1017 unit: void left_multiply44f44f() file: layer0/Vector.cpp start line: 1156 end line: 1197 size: 35 LOC McCabe index: 1 number of parameters: 2 id: 1018 unit: void right_multiply44f44f() file: layer0/Vector.cpp start line: 1199 end line: 1241 size: 35 LOC McCabe index: 1 number of parameters: 2 id: 1019 unit: static void IsosurfCode() file: layer0/Isosurf.cpp start line: 419 end line: 456 size: 35 LOC McCabe index: 7 number of parameters: 3 id: 1020 unit: int ChampFindUniqueStart() file: contrib/champ/champ.c start line: 2000 end line: 2038 size: 35 LOC McCabe index: 9 number of parameters: 4 id: 1021 unit: int ChampAtomMatch() file: contrib/champ/champ.c start line: 5166 end line: 5203 size: 35 LOC McCabe index: 35 number of parameters: 2 id: 1022 unit: static int parse_static_data() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 915 end line: 997 size: 35 LOC McCabe index: 14 number of parameters: 2 id: 1023 unit: static int write_gro_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 214 end line: 256 size: 35 LOC McCabe index: 4 number of parameters: 2 id: 1024 unit: static fio_size_t fio_fread() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 410 end line: 457 size: 35 LOC McCabe index: 7 number of parameters: 4 id: 1025 unit: static int increment_filename() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 372 end line: 428 size: 35 LOC McCabe index: 11 number of parameters: 1 id: 1026 unit: static int read_fs4_data() file: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp start line: 257 end line: 301 size: 35 LOC McCabe index: 5 number of parameters: 4 id: 1027 unit: static int read_phi_data() file: contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp start line: 184 end line: 226 size: 35 LOC McCabe index: 8 number of parameters: 4 id: 1028 unit: static void close_molden_read() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 654 end line: 694 size: 35 LOC McCabe index: 6 number of parameters: 1 id: 1029 unit: static int RepGetSphereMode() file: layer2/RepSphere.cpp start line: 139 end line: 173 size: 35 LOC McCabe index: 13 number of parameters: 3 id: 1030 unit: void CartoonGenerateRefine() file: layer2/RepCartoon.cpp start line: 2223 end line: 2259 size: 35 LOC McCabe index: 6 number of parameters: 6 id: 1031 unit: int RepCylinder() file: layer2/RepCylBond.cpp start line: 69 end line: 104 size: 35 LOC McCabe index: 13 number of parameters: 11 id: 1032 unit: int EditorDeselectIfSelected() file: layer3/Editor.cpp start line: 351 end line: 386 size: 35 LOC McCabe index: 10 number of parameters: 4 id: 1033 unit: def window_cmd() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 35 LOC McCabe index: 12 number of parameters: 6 id: 1034 unit: def load_mae_dialog() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 35 LOC McCabe index: 6 number of parameters: 2 id: 1035 unit: def _load() file: modules/pymol/internal.py start line: 0 end line: 0 size: 35 LOC McCabe index: 7 number of parameters: 14 id: 1036 unit: def complete_sc() file: modules/pymol/parser.py start line: 0 end line: 0 size: 35 LOC McCabe index: 13 number of parameters: 5 id: 1037 unit: def multifilenamegen() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 35 LOC McCabe index: 17 number of parameters: 4 id: 1038 unit: def dump() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 35 LOC McCabe index: 10 number of parameters: 1 id: 1039 unit: def toList() file: modules/chempy/pdb.py start line: 0 end line: 0 size: 35 LOC McCabe index: 11 number of parameters: 2 id: 1040 unit: def fill_box() file: modules/chempy/solvate.py start line: 0 end line: 0 size: 35 LOC McCabe index: 9 number of parameters: 3 id: 1041 unit: def read_punch_list() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 35 LOC McCabe index: 12 number of parameters: 2 id: 1042 unit: def _restore() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 35 LOC McCabe index: 12 number of parameters: 1 id: 1043 unit: int PLabelExprUsesVariable() file: layer1/P.cpp start line: 119 end line: 153 size: 34 LOC McCabe index: 15 number of parameters: 3 id: 1044 unit: int SceneInit() file: layer1/Scene.cpp start line: 5894 end line: 5946 size: 34 LOC McCabe index: 2 number of parameters: 1 id: 1045 unit: int SettingSetFromTuple() file: layer1/Setting.cpp start line: 1223 end line: 1260 size: 34 LOC McCabe index: 8 number of parameters: 4 id: 1046 unit: void SettingRestoreDefault() file: layer1/Setting.cpp start line: 1523 end line: 1565 size: 34 LOC McCabe index: 11 number of parameters: 3 id: 1047 unit: static void fill_gradient() file: layer1/Ray.cpp start line: 430 end line: 465 size: 34 LOC McCabe index: 6 number of parameters: 8 id: 1048 unit: void RayRenderColorTable() file: layer1/Ray.cpp start line: 6590 end line: 6627 size: 34 LOC McCabe index: 11 number of parameters: 4 id: 1049 unit: int ColorGetEncoded() file: layer1/Color.cpp start line: 3038 end line: 3072 size: 34 LOC McCabe index: 10 number of parameters: 3 id: 1050 unit: void PConv44PyListTo44f() file: layer1/PConv.cpp start line: 1216 end line: 1249 size: 34 LOC McCabe index: 12 number of parameters: 2 id: 1051 unit: int MovieSeekScene() file: layer1/Movie.cpp start line: 1071 end line: 1105 size: 34 LOC McCabe index: 10 number of parameters: 2 id: 1052 unit: int WordMatch() file: layer0/Word.cpp start line: 751 end line: 793 size: 34 LOC McCabe index: 15 number of parameters: 4 id: 1053 unit: void CShaderMgr::bindOffscreenOIT() file: layer0/ShaderMgr.cpp start line: 1836 end line: 1873 size: 34 LOC McCabe index: 7 number of parameters: 3 id: 1054 unit: int MatrixInvTransformExtentsR44d3f() file: layer0/Matrix.cpp start line: 390 end line: 429 size: 34 LOC McCabe index: 10 number of parameters: 5 id: 1055 unit: int MatrixTransformExtentsR44d3f() file: layer0/Matrix.cpp start line: 431 end line: 470 size: 34 LOC McCabe index: 10 number of parameters: 5 id: 1056 unit: static int get_esp_charges() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4035 end line: 4079 size: 34 LOC McCabe index: 6 number of parameters: 1 id: 1057 unit: static int vtf_parse_userdata() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 1300 end line: 1339 size: 34 LOC McCabe index: 4 number of parameters: 4 id: 1058 unit: static void print_input_data() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 316 end line: 359 size: 34 LOC McCabe index: 4 number of parameters: 1 id: 1059 unit: static int read_shell_primitives() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 644 end line: 698 size: 34 LOC McCabe index: 7 number of parameters: 4 id: 1060 unit: void get_ascii_item() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2125 end line: 2161 size: 34 LOC McCabe index: 9 number of parameters: 5 id: 1061 unit: static int read_mol2_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 267 end line: 311 size: 34 LOC McCabe index: 10 number of parameters: 3 id: 1062 unit: static int mdio_header() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 529 end line: 570 size: 34 LOC McCabe index: 15 number of parameters: 2 id: 1063 unit: void MMTF_container_destroy() file: contrib/mmtf-c/mmtf_parser.cpp start line: 273 end line: 311 size: 34 LOC McCabe index: 1 number of parameters: 1 id: 1064 unit: bool CoordSetInsureOrthogonal() file: layer2/CoordSet.cpp start line: 806 end line: 851 size: 34 LOC McCabe index: 12 number of parameters: 5 id: 1065 unit: void GenerateOutlineOfSlice() file: layer2/ObjectSlice.cpp start line: 902 end line: 940 size: 34 LOC McCabe index: 3 number of parameters: 3 id: 1066 unit: static void check_gl_stereo_capable() file: layer5/PyMOL.cpp start line: 2319 end line: 2364 size: 34 LOC McCabe index: 13 number of parameters: 1 id: 1067 unit: PyMOLreturn_status PyMOL_SetButton() file: layer5/PyMOL.cpp start line: 3260 end line: 3299 size: 34 LOC McCabe index: 8 number of parameters: 4 id: 1068 unit: void writeCTabV3000() file: layer3/MoleculeExporter.cpp start line: 786 end line: 832 size: 34 LOC McCabe index: 5 number of parameters: 0 id: 1069 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 1300 end line: 1342 size: 34 LOC McCabe index: 5 number of parameters: 0 id: 1070 unit: TNT::Array1D solve() file: modules/cealign/src/tnt/jama_qr.h start line: 217 end line: 259 size: 34 LOC McCabe index: 9 number of parameters: 1 id: 1071 unit: Vector solve() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1746 end line: 1788 size: 34 LOC McCabe index: 9 number of parameters: 1 id: 1072 unit: def ondrag() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 34 LOC McCabe index: 6 number of parameters: 2 id: 1073 unit: def __init__() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 34 LOC McCabe index: 10 number of parameters: 3 id: 1074 unit: def findPlugins() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 34 LOC McCabe index: 14 number of parameters: 1 id: 1075 unit: def get_help_only_keywords() file: modules/pymol/keywords.py start line: 0 end line: 0 size: 34 LOC McCabe index: 1 number of parameters: 1 id: 1076 unit: def mol_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 34 LOC McCabe index: 1 number of parameters: 2 id: 1077 unit: def assign() file: modules/chempy/bmin/realtime.py start line: 0 end line: 0 size: 34 LOC McCabe index: 7 number of parameters: 2 id: 1078 unit: def read_chem_comp_atom_model_cartn() file: modules/chempy/cif.py start line: 0 end line: 0 size: 34 LOC McCabe index: 11 number of parameters: 4 id: 1079 unit: def purge() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 34 LOC McCabe index: 6 number of parameters: 1 id: 1080 unit: int ExtrudeCylindersToCGO() file: layer1/Extrude.cpp start line: 1062 end line: 1098 size: 33 LOC McCabe index: 3 number of parameters: 3 id: 1081 unit: int PFlushFast() file: layer1/P.cpp start line: 2533 end line: 2567 size: 33 LOC McCabe index: 5 number of parameters: 1 id: 1082 unit: int SettingUniqueCopyAll() file: layer1/Setting.cpp start line: 547 end line: 584 size: 33 LOC McCabe index: 6 number of parameters: 3 id: 1083 unit: int CButMode::click() file: layer1/ButMode.cpp start line: 149 end line: 188 size: 33 LOC McCabe index: 9 number of parameters: 4 id: 1084 unit: int WizardDoPick() file: layer1/Wizard.cpp start line: 335 end line: 373 size: 33 LOC McCabe index: 11 number of parameters: 3 id: 1085 unit: int WizardDoView() file: layer1/Wizard.cpp start line: 439 end line: 471 size: 33 LOC McCabe index: 10 number of parameters: 2 id: 1086 unit: float ShakerDoLine() file: layer1/Shaker.cpp start line: 144 end line: 185 size: 33 LOC McCabe index: 3 number of parameters: 7 id: 1087 unit: static void TTTToViewElem() file: layer1/PyMOLObject.cpp start line: 111 end line: 157 size: 33 LOC McCabe index: 1 number of parameters: 2 id: 1088 unit: void ObjectCombineTTT() file: layer1/PyMOLObject.cpp start line: 827 end line: 859 size: 33 LOC McCabe index: 10 number of parameters: 4 id: 1089 unit: int CMovie::drag() file: layer1/Movie.cpp start line: 1666 end line: 1699 size: 33 LOC McCabe index: 9 number of parameters: 3 id: 1090 unit: void TextureInitTextTextureImpl() file: layer0/Texture.cpp start line: 94 end line: 126 size: 33 LOC McCabe index: 6 number of parameters: 2 id: 1091 unit: void _OVHeap_Free() file: ov/src/OVHeap.cpp start line: 409 end line: 443 size: 33 LOC McCabe index: 4 number of parameters: 5 id: 1092 unit: static int read_trr_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 474 end line: 509 size: 33 LOC McCabe index: 7 number of parameters: 3 id: 1093 unit: static int read_xbgf_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 272 end line: 317 size: 33 LOC McCabe index: 11 number of parameters: 3 id: 1094 unit: static int write_js_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1852 end line: 1908 size: 33 LOC McCabe index: 5 number of parameters: 2 id: 1095 unit: static int read_bgf_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 227 end line: 272 size: 33 LOC McCabe index: 11 number of parameters: 3 id: 1096 unit: static int read_molden_rundata() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 592 end line: 646 size: 33 LOC McCabe index: 8 number of parameters: 2 id: 1097 unit: void GenerateRepCartoonDrawDebugLineAlongPath() file: layer2/RepCartoon.cpp start line: 1530 end line: 1565 size: 33 LOC McCabe index: 7 number of parameters: 3 id: 1098 unit: void RepSphere_Generate_Triangles() file: layer2/RepSphereGenerate.cpp start line: 25 end line: 61 size: 33 LOC McCabe index: 6 number of parameters: 3 id: 1099 unit: static int RepLine() file: layer2/RepWireBond.cpp start line: 42 end line: 76 size: 33 LOC McCabe index: 13 number of parameters: 13 id: 1100 unit: int VFontIndent() file: layer2/VFont.cpp start line: 140 end line: 173 size: 33 LOC McCabe index: 8 number of parameters: 7 id: 1101 unit: def __init__() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 33 LOC McCabe index: 15 number of parameters: 2 id: 1102 unit: def reload_plugins() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 33 LOC McCabe index: 5 number of parameters: 2 id: 1103 unit: def __init__() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 33 LOC McCabe index: 2 number of parameters: 3 id: 1104 unit: def protein_vacuum_esp() file: modules/pymol/util.py start line: 0 end line: 0 size: 33 LOC McCabe index: 7 number of parameters: 5 id: 1105 unit: def __init__() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 33 LOC McCabe index: 2 number of parameters: 2 id: 1106 unit: def cyl_text() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 33 LOC McCabe index: 6 number of parameters: 17 id: 1107 unit: def unlock() file: modules/pymol/locking.py start line: 0 end line: 0 size: 33 LOC McCabe index: 20 number of parameters: 2 id: 1108 unit: def read_atom_site_fract() file: modules/chempy/cif.py start line: 0 end line: 0 size: 33 LOC McCabe index: 10 number of parameters: 4 id: 1109 unit: int SettingWrapperObjectAssignSubScript() file: layer1/P.cpp start line: 477 end line: 516 size: 32 LOC McCabe index: 9 number of parameters: 3 id: 1110 unit: static void SceneRovingCleanup() file: layer1/Scene.cpp start line: 4505 end line: 4539 size: 32 LOC McCabe index: 1 number of parameters: 1 id: 1111 unit: void CScene::reshape() file: layer1/Scene.cpp start line: 5950 end line: 5989 size: 32 LOC McCabe index: 8 number of parameters: 2 id: 1112 unit: void ColorUpdateFromLut() file: layer1/Color.cpp start line: 2865 end line: 2902 size: 32 LOC McCabe index: 9 number of parameters: 2 id: 1113 unit: int WizardSetStack() file: layer1/Wizard.cpp start line: 970 end line: 1003 size: 32 LOC McCabe index: 9 number of parameters: 2 id: 1114 unit: int PConvPyListOrTupleToFloatArrayInPlace() file: layer1/PConv.cpp start line: 797 end line: 829 size: 32 LOC McCabe index: 10 number of parameters: 3 id: 1115 unit: int PConvPyListToStringVLA() file: layer1/PConv.cpp start line: 1123 end line: 1154 size: 32 LOC McCabe index: 9 number of parameters: 2 id: 1116 unit: void plutBitmapCharacter() file: layer0/os_gl.cpp start line: 2827 end line: 2866 size: 32 LOC McCabe index: 4 number of parameters: 1 id: 1117 unit: void MapCacheReset() file: layer0/Map.cpp start line: 74 end line: 105 size: 32 LOC McCabe index: 5 number of parameters: 1 id: 1118 unit: static void xx_matrix_back_substitute() file: layer0/Matrix.cpp start line: 304 end line: 336 size: 32 LOC McCabe index: 7 number of parameters: 4 id: 1119 unit: ov_uint32 OVRandom_Get_int32() file: ov/src/OVRandom.cpp start line: 154 end line: 194 size: 32 LOC McCabe index: 5 number of parameters: 1 id: 1120 unit: void SortIntIndex() file: contrib/champ/sort.c start line: 3 end line: 37 size: 32 LOC McCabe index: 10 number of parameters: 3 id: 1121 unit: static int abinit_filetype() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 308 end line: 358 size: 32 LOC McCabe index: 9 number of parameters: 2 id: 1122 unit: static void RepSphereAddAtomVisInfoToStoredVC() file: layer2/RepSphere.cpp start line: 295 end line: 331 size: 32 LOC McCabe index: 5 number of parameters: 12 id: 1123 unit: static void ObjectCallbackRender() file: layer2/ObjectCallback.cpp start line: 68 end line: 115 size: 32 LOC McCabe index: 12 number of parameters: 2 id: 1124 unit: void ObjectMeshRecomputeExtent() file: layer2/ObjectMesh.cpp start line: 1381 end line: 1415 size: 32 LOC McCabe index: 8 number of parameters: 1 id: 1125 unit: void ObjectVolumeRecomputeExtent() file: layer2/ObjectVolume.cpp start line: 1291 end line: 1325 size: 32 LOC McCabe index: 8 number of parameters: 1 id: 1126 unit: static char RotateU() file: layer2/CoordSet.cpp start line: 854 end line: 898 size: 32 LOC McCabe index: 8 number of parameters: 2 id: 1127 unit: void ObjectSurfaceRecomputeExtent() file: layer2/ObjectSurface.cpp start line: 1261 end line: 1294 size: 32 LOC McCabe index: 8 number of parameters: 1 id: 1128 unit: static int ObjectCGOStateFromPyList() file: layer2/ObjectCGO.cpp start line: 60 end line: 93 size: 32 LOC McCabe index: 10 number of parameters: 4 id: 1129 unit: void ObjectCGORecomputeExtent() file: layer2/ObjectCGO.cpp start line: 175 end line: 206 size: 32 LOC McCabe index: 9 number of parameters: 1 id: 1130 unit: static int check_and_add() file: layer2/RepSurface.cpp start line: 218 end line: 250 size: 32 LOC McCabe index: 7 number of parameters: 4 id: 1131 unit: static bool parse_pqr_atom_line() file: layer2/ObjectMolecule2.cpp start line: 1960 end line: 2006 size: 32 LOC McCabe index: 11 number of parameters: 4 id: 1132 unit: void ObjectMapStateRegeneratePoints() file: layer2/ObjectMap.cpp start line: 1282 end line: 1314 size: 32 LOC McCabe index: 10 number of parameters: 1 id: 1133 unit: PyMOLreturn_float_array PyMOL_Spectrum() file: layer5/PyMOL.cpp start line: 3388 end line: 3422 size: 32 LOC McCabe index: 3 number of parameters: 8 id: 1134 unit: int MainFromPyList() file: layer5/main.cpp start line: 1729 end line: 1764 size: 32 LOC McCabe index: 12 number of parameters: 2 id: 1135 unit: void EditorGetNextMultiatom() file: layer3/Editor.cpp start line: 490 end line: 531 size: 32 LOC McCabe index: 5 number of parameters: 2 id: 1136 unit: void EditorInactivate() file: layer3/Editor.cpp start line: 1666 end line: 1699 size: 32 LOC McCabe index: 1 number of parameters: 1 id: 1137 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 661 end line: 695 size: 32 LOC McCabe index: 4 number of parameters: 0 id: 1138 unit: def run() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 32 LOC McCabe index: 4 number of parameters: 2 id: 1139 unit: def get_plugdir() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 32 LOC McCabe index: 7 number of parameters: 1 id: 1140 unit: def _load_splash_image() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 32 LOC McCabe index: 9 number of parameters: 3 id: 1141 unit: def read_atom_site_aniso() file: modules/chempy/cif.py start line: 0 end line: 0 size: 32 LOC McCabe index: 6 number of parameters: 4 id: 1142 unit: def read_geom_bond_atom_site_labels() file: modules/chempy/cif.py start line: 0 end line: 0 size: 32 LOC McCabe index: 8 number of parameters: 4 id: 1143 unit: int BasisInit() file: layer1/Basis.cpp start line: 3603 end line: 3633 size: 31 LOC McCabe index: 6 number of parameters: 3 id: 1144 unit: static int label_next_token() file: layer1/P.cpp start line: 78 end line: 117 size: 31 LOC McCabe index: 13 number of parameters: 2 id: 1145 unit: static int get_api_lock() file: layer1/P.cpp start line: 1449 end line: 1484 size: 31 LOC McCabe index: 8 number of parameters: 2 id: 1146 unit: void PUnblock() file: layer1/P.cpp start line: 2664 end line: 2697 size: 31 LOC McCabe index: 3 number of parameters: 1 id: 1147 unit: int SceneObjectDel() file: layer1/Scene.cpp start line: 2497 end line: 2531 size: 31 LOC McCabe index: 10 number of parameters: 3 id: 1148 unit: int SettingSet_color() file: layer1/Setting.cpp start line: 1737 end line: 1767 size: 31 LOC McCabe index: 11 number of parameters: 3 id: 1149 unit: int CharacterNewFromBitmap() file: layer1/Character.cpp start line: 133 end line: 163 size: 31 LOC McCabe index: 4 number of parameters: 9 id: 1150 unit: int CharacterNewFromBytemap() file: layer1/Character.cpp start line: 165 end line: 195 size: 31 LOC McCabe index: 4 number of parameters: 9 id: 1151 unit: static int ColorFindExtByName() file: layer1/Color.cpp start line: 253 end line: 283 size: 31 LOC McCabe index: 11 number of parameters: 4 id: 1152 unit: int PConvPyListToStrVLAList() file: layer1/PConv.cpp start line: 116 end line: 146 size: 31 LOC McCabe index: 7 number of parameters: 3 id: 1153 unit: void PyMOLReadPixels() file: layer0/os_gl.cpp start line: 6 end line: 55 size: 31 LOC McCabe index: 1 number of parameters: 7 id: 1154 unit: OVreturn_word OVLexicon_BorrowFromCString() file: ov/src/OVLexicon.cpp start line: 342 end line: 378 size: 31 LOC McCabe index: 5 number of parameters: 2 id: 1155 unit: OVstatus OVOneToAny_Pack() file: ov/src/OVOneToAny.cpp start line: 234 end line: 265 size: 31 LOC McCabe index: 10 number of parameters: 1 id: 1156 unit: OVstatus OVOneToOne_Pack() file: ov/src/OVOneToOne.cpp start line: 291 end line: 322 size: 31 LOC McCabe index: 10 number of parameters: 1 id: 1157 unit: int ChampMatch() file: contrib/champ/champ.c start line: 47 end line: 83 size: 31 LOC McCabe index: 1 number of parameters: 7 id: 1158 unit: void ChiralInit() file: contrib/champ/chiral.c start line: 10 end line: 55 size: 31 LOC McCabe index: 2 number of parameters: 1 id: 1159 unit: static int read_localized_orbitals() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2211 end line: 2248 size: 31 LOC McCabe index: 8 number of parameters: 1 id: 1160 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 776 end line: 810 size: 31 LOC McCabe index: 6 number of parameters: 2 id: 1161 unit: static int read_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 469 end line: 503 size: 31 LOC McCabe index: 3 number of parameters: 8 id: 1162 unit: static int read_xbgf_structure() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 229 end line: 268 size: 31 LOC McCabe index: 9 number of parameters: 3 id: 1163 unit: static int read_xbgf_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 473 end line: 506 size: 31 LOC McCabe index: 3 number of parameters: 8 id: 1164 unit: static int goto_keyline() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 962 end line: 1002 size: 31 LOC McCabe index: 6 number of parameters: 2 id: 1165 unit: static int read_parm7_flag() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 75 end line: 112 size: 31 LOC McCabe index: 10 number of parameters: 3 id: 1166 unit: void ply_describe_property() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 279 end line: 317 size: 31 LOC McCabe index: 3 number of parameters: 3 id: 1167 unit: void add_property() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2303 end line: 2342 size: 31 LOC McCabe index: 4 number of parameters: 3 id: 1168 unit: void write_homebox() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1258 end line: 1294 size: 31 LOC McCabe index: 2 number of parameters: 2 id: 1169 unit: static int read_bgf_structure() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 183 end line: 223 size: 31 LOC McCabe index: 9 number of parameters: 3 id: 1170 unit: static int GEO_read_structure() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 493 end line: 539 size: 31 LOC McCabe index: 5 number of parameters: 3 id: 1171 unit: static int xsf_readbox() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 141 end line: 182 size: 31 LOC McCabe index: 6 number of parameters: 4 id: 1172 unit: void AtomInfoCombine() file: layer2/AtomInfo.cpp start line: 1115 end line: 1152 size: 31 LOC McCabe index: 11 number of parameters: 4 id: 1173 unit: void RepCartoonComputeTangents() file: layer2/RepCartoon.cpp start line: 3196 end line: 3228 size: 31 LOC McCabe index: 6 number of parameters: 4 id: 1174 unit: void ObjectCallbackRecomputeExtent() file: layer2/ObjectCallback.cpp start line: 189 end line: 222 size: 31 LOC McCabe index: 8 number of parameters: 1 id: 1175 unit: static void ConnectComponent() file: layer2/CifMoleculeReader.cpp start line: 394 end line: 441 size: 31 LOC McCabe index: 12 number of parameters: 4 id: 1176 unit: static void add_missing_ca_sub() file: layer2/CifMoleculeReader.cpp start line: 1333 end line: 1371 size: 31 LOC McCabe index: 4 number of parameters: 8 id: 1177 unit: static bool read_ss() file: layer2/CifMoleculeReader.cpp start line: 1506 end line: 1548 size: 31 LOC McCabe index: 9 number of parameters: 4 id: 1178 unit: static int ObjectGadgetRampHandleInputColors() file: layer2/ObjectGadgetRamp.cpp start line: 902 end line: 939 size: 31 LOC McCabe index: 8 number of parameters: 1 id: 1179 unit: void CoordSet::update() file: layer2/CoordSet.cpp start line: 1221 end line: 1255 size: 31 LOC McCabe index: 4 number of parameters: 1 id: 1180 unit: void CoordSet::appendIndices() file: layer2/CoordSet.cpp start line: 1615 end line: 1646 size: 31 LOC McCabe index: 8 number of parameters: 1 id: 1181 unit: static void ObjectCGORender() file: layer2/ObjectCGO.cpp start line: 492 end line: 526 size: 31 LOC McCabe index: 8 number of parameters: 2 id: 1182 unit: static void RayDrawLineAsGeometryWithOffsets() file: layer2/RepLabel.cpp start line: 172 end line: 208 size: 31 LOC McCabe index: 1 number of parameters: 14 id: 1183 unit: void PyMOL_Special() file: layer5/PyMOL.cpp start line: 2500 end line: 2534 size: 31 LOC McCabe index: 8 number of parameters: 5 id: 1184 unit: static void MainKey() file: layer5/main.cpp start line: 843 end line: 881 size: 31 LOC McCabe index: 10 number of parameters: 3 id: 1185 unit: void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 622 end line: 659 size: 31 LOC McCabe index: 3 number of parameters: 0 id: 1186 unit: def _cache_purge() file: modules/pymol/internal.py start line: 0 end line: 0 size: 31 LOC McCabe index: 10 number of parameters: 2 id: 1187 unit: def _cache_set() file: modules/pymol/internal.py start line: 0 end line: 0 size: 31 LOC McCabe index: 7 number of parameters: 3 id: 1188 unit: def uninstall() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 31 LOC McCabe index: 7 number of parameters: 2 id: 1189 unit: def __init__() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 31 LOC McCabe index: 7 number of parameters: 3 id: 1190 unit: def __init__() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 31 LOC McCabe index: 5 number of parameters: 2 id: 1191 unit: def __init__() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 31 LOC McCabe index: 3 number of parameters: 2 id: 1192 unit: def guessCols() file: modules/pymol/headering.py start line: 0 end line: 0 size: 31 LOC McCabe index: 10 number of parameters: 2 id: 1193 unit: def stpng() file: modules/pymol/contrib/__init__.py start line: 0 end line: 0 size: 31 LOC McCabe index: 10 number of parameters: 1 id: 1194 unit: def ramp_expand() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 31 LOC McCabe index: 9 number of parameters: 2 id: 1195 unit: def append_tri() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 31 LOC McCabe index: 10 number of parameters: 1 id: 1196 unit: def mini() file: modules/chempy/tinker/realtime.py start line: 0 end line: 0 size: 31 LOC McCabe index: 6 number of parameters: 4 id: 1197 unit: def toList() file: modules/chempy/xyz.py start line: 0 end line: 0 size: 31 LOC McCabe index: 10 number of parameters: 3 id: 1198 unit: def read_chem_comp_bond_atom_ids() file: modules/chempy/cif.py start line: 0 end line: 0 size: 31 LOC McCabe index: 7 number of parameters: 4 id: 1199 unit: def read_ss() file: modules/chempy/cif.py start line: 0 end line: 0 size: 31 LOC McCabe index: 12 number of parameters: 1 id: 1200 unit: void BasisGetTriangleNormal() file: layer1/Basis.cpp start line: 1474 end line: 1512 size: 30 LOC McCabe index: 2 number of parameters: 5 id: 1201 unit: int TextGetFontID() file: layer1/Text.cpp start line: 704 end line: 736 size: 30 LOC McCabe index: 13 number of parameters: 6 id: 1202 unit: int SceneSetFog() file: layer1/Scene.cpp start line: 6817 end line: 6850 size: 30 LOC McCabe index: 8 number of parameters: 1 id: 1203 unit: static int SymmetryFromPyList() file: layer1/Symmetry.cpp start line: 48 end line: 81 size: 30 LOC McCabe index: 12 number of parameters: 2 id: 1204 unit: int CControl::drag() file: layer1/Control.cpp start line: 257 end line: 286 size: 30 LOC McCabe index: 6 number of parameters: 3 id: 1205 unit: void OrthoSetBackgroundImage() file: layer1/Ortho.cpp start line: 2784 end line: 2813 size: 30 LOC McCabe index: 4 number of parameters: 4 id: 1206 unit: int WizardUpdate() file: layer1/Wizard.cpp start line: 93 end line: 124 size: 30 LOC McCabe index: 5 number of parameters: 1 id: 1207 unit: void ObjectTranslateTTT() file: layer1/PyMOLObject.cpp start line: 861 end line: 890 size: 30 LOC McCabe index: 10 number of parameters: 3 id: 1208 unit: int WordKey() file: layer0/Word.cpp start line: 977 end line: 1006 size: 30 LOC McCabe index: 7 number of parameters: 6 id: 1209 unit: static void TriangleMove() file: layer0/Triangle.cpp start line: 521 end line: 555 size: 30 LOC McCabe index: 7 number of parameters: 3 id: 1210 unit: static int IsosurfCodeVertices() file: layer0/Isosurf.cpp start line: 2148 end line: 2177 size: 30 LOC McCabe index: 7 number of parameters: 1 id: 1211 unit: static int write_structure() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 317 end line: 351 size: 30 LOC McCabe index: 11 number of parameters: 3 id: 1212 unit: static int read_mdf_structure() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 208 end line: 251 size: 30 LOC McCabe index: 9 number of parameters: 3 id: 1213 unit: static int read_parm_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp start line: 81 end line: 111 size: 30 LOC McCabe index: 4 number of parameters: 8 id: 1214 unit: static int parse_parm7_respointers() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 285 end line: 316 size: 30 LOC McCabe index: 7 number of parameters: 6 id: 1215 unit: static int shelltype_int() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 492 end line: 523 size: 30 LOC McCabe index: 8 number of parameters: 1 id: 1216 unit: static void addAtoms() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1210 end line: 1242 size: 30 LOC McCabe index: 11 number of parameters: 3 id: 1217 unit: static int write_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1102 end line: 1136 size: 30 LOC McCabe index: 4 number of parameters: 2 id: 1218 unit: static oper_collection_t parse_oper_expression() file: layer2/CifMoleculeReader.cpp start line: 552 end line: 599 size: 30 LOC McCabe index: 7 number of parameters: 1 id: 1219 unit: void ObjectMeshDump() file: layer2/ObjectMesh.cpp start line: 340 end line: 369 size: 30 LOC McCabe index: 8 number of parameters: 3 id: 1220 unit: void RepSphere_Generate_Point_Sprites() file: layer2/RepSphereGenerate.cpp start line: 91 end line: 127 size: 30 LOC McCabe index: 2 number of parameters: 4 id: 1221 unit: void ObjectSurfaceStateInit() file: layer2/ObjectSurface.cpp start line: 1084 end line: 1114 size: 30 LOC McCabe index: 5 number of parameters: 2 id: 1222 unit: int ObjectSurfaceSetLevel() file: layer2/ObjectSurface.cpp start line: 1227 end line: 1256 size: 30 LOC McCabe index: 7 number of parameters: 4 id: 1223 unit: PyMOLreturn_status PyMOL_CmdPseudoatom() file: layer5/PyMOL.cpp start line: 1715 end line: 1744 size: 30 LOC McCabe index: 4 number of parameters: 22 id: 1224 unit: void PyMOL_SetClickReady() file: layer5/PyMOL.cpp start line: 2741 end line: 2771 size: 30 LOC McCabe index: 5 number of parameters: 9 id: 1225 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 996 end line: 1039 size: 30 LOC McCabe index: 6 number of parameters: 0 id: 1226 unit: def load_form() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 30 LOC McCabe index: 7 number of parameters: 3 id: 1227 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 30 LOC McCabe index: 1 number of parameters: 2 id: 1228 unit: def constructMain() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 30 LOC McCabe index: 1 number of parameters: 1 id: 1229 unit: def createlegacypmgapp() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 30 LOC McCabe index: 5 number of parameters: 0 id: 1230 unit: def protein_assign_charges_and_radii() file: modules/pymol/util.py start line: 0 end line: 0 size: 30 LOC McCabe index: 3 number of parameters: 2 id: 1231 unit: def __init__() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 30 LOC McCabe index: 4 number of parameters: 2 id: 1232 unit: def group_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 30 LOC McCabe index: 1 number of parameters: 2 id: 1233 unit: def mini() file: modules/chempy/bmin/realtime.py start line: 0 end line: 0 size: 30 LOC McCabe index: 4 number of parameters: 8 id: 1234 unit: ov_status PCacheGet() file: layer1/P.cpp start line: 1192 end line: 1222 size: 29 LOC McCabe index: 6 number of parameters: 4 id: 1235 unit: static int get_stereo_x() file: layer1/Scene.cpp start line: 334 end line: 362 size: 29 LOC McCabe index: 10 number of parameters: 4 id: 1236 unit: void SceneLoadAnimation() file: layer1/Scene.cpp start line: 452 end line: 480 size: 29 LOC McCabe index: 4 number of parameters: 3 id: 1237 unit: void SceneGetAdjustedLightValues() file: layer1/Scene.cpp start line: 6643 end line: 6676 size: 29 LOC McCabe index: 8 number of parameters: 6 id: 1238 unit: static ov_size idtf_dump_model_nodes() file: layer1/Ray.cpp start line: 1877 end line: 1911 size: 29 LOC McCabe index: 2 number of parameters: 4 id: 1239 unit: int ControlSdofUpdate() file: layer1/Control.cpp start line: 109 end line: 144 size: 29 LOC McCabe index: 9 number of parameters: 7 id: 1240 unit: static int get_wrap_x() file: layer1/Ortho.cpp start line: 168 end line: 196 size: 29 LOC McCabe index: 10 number of parameters: 4 id: 1241 unit: int WizardDoSelect() file: layer1/Wizard.cpp start line: 140 end line: 176 size: 29 LOC McCabe index: 8 number of parameters: 3 id: 1242 unit: int CWizard::drag() file: layer1/Wizard.cpp start line: 667 end line: 701 size: 29 LOC McCabe index: 7 number of parameters: 3 id: 1243 unit: int PConvPyObjectToStrMaxLen() file: layer1/PConv.cpp start line: 393 end line: 421 size: 29 LOC McCabe index: 6 number of parameters: 3 id: 1244 unit: static void ColladaWriteLibraryLights() file: layer1/COLLADA.cpp start line: 179 end line: 219 size: 29 LOC McCabe index: 2 number of parameters: 3 id: 1245 unit: int ObjectGetTotalMatrix() file: layer1/PyMOLObject.cpp start line: 964 end line: 993 size: 29 LOC McCabe index: 9 number of parameters: 4 id: 1246 unit: int FeedbackInit() file: layer0/Feedback.cpp start line: 25 end line: 60 size: 29 LOC McCabe index: 6 number of parameters: 2 id: 1247 unit: int CShaderPrg::Link() file: layer0/ShaderPrg.cpp start line: 176 end line: 207 size: 29 LOC McCabe index: 7 number of parameters: 0 id: 1248 unit: int MatrixEigensolveC44d() file: layer0/Matrix.cpp start line: 1621 end line: 1657 size: 29 LOC McCabe index: 3 number of parameters: 5 id: 1249 unit: void OVOneToAny_Stats() file: ov/src/OVOneToAny.cpp start line: 330 end line: 359 size: 29 LOC McCabe index: 7 number of parameters: 1 id: 1250 unit: void OVOneToOne_Dump() file: ov/src/OVOneToOne.cpp start line: 65 end line: 94 size: 29 LOC McCabe index: 9 number of parameters: 1 id: 1251 unit: static int read_gamess_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 505 end line: 545 size: 29 LOC McCabe index: 3 number of parameters: 2 id: 1252 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1951 end line: 1979 size: 29 LOC McCabe index: 1 number of parameters: 0 id: 1253 unit: static int write_dcdstep() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 716 end line: 751 size: 29 LOC McCabe index: 6 number of parameters: 9 id: 1254 unit: static int trx_real() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1300 end line: 1333 size: 29 LOC McCabe index: 12 number of parameters: 2 id: 1255 unit: static int xtc_data() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1561 end line: 1589 size: 29 LOC McCabe index: 15 number of parameters: 3 id: 1256 unit: static int xtc_receivebits() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1719 end line: 1749 size: 29 LOC McCabe index: 4 number of parameters: 2 id: 1257 unit: static int read_wave_coeffs() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1255 end line: 1295 size: 29 LOC McCabe index: 9 number of parameters: 2 id: 1258 unit: virtual void insert_row() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1028 end line: 1059 size: 29 LOC McCabe index: 11 number of parameters: 1 id: 1259 unit: std::string quotify() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1287 end line: 1324 size: 29 LOC McCabe index: 16 number of parameters: 2 id: 1260 unit: int GenerateRepCartoonDrawDebugNormals() file: layer2/RepCartoon.cpp start line: 1568 end line: 1596 size: 29 LOC McCabe index: 8 number of parameters: 3 id: 1261 unit: void RepCartoonComputePuttyValues() file: layer2/RepCartoon.cpp start line: 3123 end line: 3154 size: 29 LOC McCabe index: 6 number of parameters: 2 id: 1262 unit: static void RepSphereRenderOneSphere_ARB() file: layer2/RepSphereImmediate.cpp start line: 28 end line: 57 size: 29 LOC McCabe index: 2 number of parameters: 7 id: 1263 unit: static void ObjectVolumeInvalidate() file: layer2/ObjectVolume.cpp start line: 353 end line: 383 size: 29 LOC McCabe index: 12 number of parameters: 4 id: 1264 unit: static void SolventDotSlideDotsAndInfo() file: layer2/RepSurface.cpp start line: 4664 end line: 4692 size: 29 LOC McCabe index: 4 number of parameters: 4 id: 1265 unit: static int lineSegIntersection() file: layer2/RepLabel.cpp start line: 669 end line: 697 size: 29 LOC McCabe index: 16 number of parameters: 5 id: 1266 unit: static float ShakerDoDist() file: layer2/Sculpt.cpp start line: 76 end line: 105 size: 29 LOC McCabe index: 3 number of parameters: 6 id: 1267 unit: def customize_compiler() file: monkeypatch_distutils.py start line: 0 end line: 0 size: 29 LOC McCabe index: 10 number of parameters: 1 id: 1268 unit: def paintHistogram() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 29 LOC McCabe index: 7 number of parameters: 3 id: 1269 unit: def mousePressEvent() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 29 LOC McCabe index: 9 number of parameters: 2 id: 1270 unit: Matrix solve() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1455 end line: 1493 size: 29 LOC McCabe index: 10 number of parameters: 1 id: 1271 unit: Array2D solve() file: modules/cealign/src/tnt/jama_lu.h start line: 231 end line: 269 size: 29 LOC McCabe index: 10 number of parameters: 1 id: 1272 unit: def toggleFrame() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 29 LOC McCabe index: 12 number of parameters: 3 id: 1273 unit: def fillit() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 29 LOC McCabe index: 11 number of parameters: 1 id: 1274 unit: def download_chem_comp() file: modules/pymol/internal.py start line: 0 end line: 0 size: 29 LOC McCabe index: 6 number of parameters: 3 id: 1275 unit: def phipsi() file: modules/pymol/util.py start line: 0 end line: 0 size: 29 LOC McCabe index: 9 number of parameters: 1 id: 1276 unit: def load_annotated_sdf() file: modules/pymol/wizard/annotation.py start line: 0 end line: 0 size: 29 LOC McCabe index: 11 number of parameters: 5 id: 1277 unit: def _validate_value() file: modules/pymol/setting.py start line: 0 end line: 0 size: 29 LOC McCabe index: 16 number of parameters: 2 id: 1278 unit: def wire_text() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 29 LOC McCabe index: 7 number of parameters: 13 id: 1279 unit: def sele_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 29 LOC McCabe index: 1 number of parameters: 2 id: 1280 unit: def __init__() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 29 LOC McCabe index: 7 number of parameters: 6 id: 1281 unit: def screw() file: modules/pymol/movie.py start line: 0 end line: 0 size: 29 LOC McCabe index: 6 number of parameters: 8 id: 1282 unit: def fromList() file: modules/chempy/cc1.py start line: 0 end line: 0 size: 29 LOC McCabe index: 6 number of parameters: 2 id: 1283 unit: def parse_m_ct() file: modules/chempy/mae.py start line: 0 end line: 0 size: 29 LOC McCabe index: 9 number of parameters: 1 id: 1284 unit: def assign_types() file: modules/chempy/hetatm.py start line: 0 end line: 0 size: 29 LOC McCabe index: 11 number of parameters: 3 id: 1285 unit: def get_contrl_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 29 LOC McCabe index: 8 number of parameters: 6 id: 1286 unit: bool lineSegIntersection() file: data/shaders/connector.gs start line: 44 end line: 72 size: 29 LOC McCabe index: 16 number of parameters: 5 id: 1287 unit: void drawLineAsGeometry() file: data/shaders/connector.gs start line: 195 end line: 227 size: 29 LOC McCabe index: 1 number of parameters: 5 id: 1288 unit: void ExtrudeCGOTraceAxes() file: layer1/Extrude.cpp start line: 532 end line: 560 size: 28 LOC McCabe index: 3 number of parameters: 2 id: 1289 unit: void TubeCapFlat() file: layer1/Extrude.cpp start line: 690 end line: 723 size: 28 LOC McCabe index: 4 number of parameters: 5 id: 1290 unit: int ViewElemVLAFromPyList() file: layer1/View.cpp start line: 516 end line: 543 size: 28 LOC McCabe index: 9 number of parameters: 4 id: 1291 unit: void ColorGetBkrdContColor() file: layer1/Color.cpp start line: 84 end line: 113 size: 28 LOC McCabe index: 7 number of parameters: 3 id: 1292 unit: int ColorConvertOldSessionIndex() file: layer1/Color.cpp start line: 389 end line: 416 size: 28 LOC McCabe index: 8 number of parameters: 2 id: 1293 unit: int WizardDoState() file: layer1/Wizard.cpp start line: 529 end line: 556 size: 28 LOC McCabe index: 8 number of parameters: 1 id: 1294 unit: int WizardDoFrame() file: layer1/Wizard.cpp start line: 558 end line: 585 size: 28 LOC McCabe index: 8 number of parameters: 1 id: 1295 unit: int PConvPyListToFloatVLANoneOkay() file: layer1/PConv.cpp start line: 568 end line: 596 size: 28 LOC McCabe index: 6 number of parameters: 2 id: 1296 unit: static int TetsurfAlloc() file: layer0/Tetsurf.cpp start line: 632 end line: 664 size: 28 LOC McCabe index: 5 number of parameters: 1 id: 1297 unit: bool ShaderMgrInit() file: layer0/ShaderMgr.cpp start line: 617 end line: 656 size: 28 LOC McCabe index: 10 number of parameters: 1 id: 1298 unit: void textureBuffer_t::texture_data_3D() file: layer0/GenericBuffer.cpp start line: 248 end line: 276 size: 28 LOC McCabe index: 4 number of parameters: 4 id: 1299 unit: OVreturn_word OVOneToOne_GetForward() file: ov/src/OVOneToOne.cpp start line: 205 end line: 232 size: 28 LOC McCabe index: 5 number of parameters: 2 id: 1300 unit: int ChampPatIdentical() file: contrib/champ/champ.c start line: 5137 end line: 5164 size: 28 LOC McCabe index: 17 number of parameters: 2 id: 1301 unit: static int read_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 203 end line: 238 size: 28 LOC McCabe index: 4 number of parameters: 8 id: 1302 unit: static int fort_get_endian_reclen() file: contrib/uiuc/plugins/molfile_plugin/src/fortread.h start line: 55 end line: 86 size: 28 LOC McCabe index: 4 number of parameters: 5 id: 1303 unit: static int read_shell_primitives() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 130 end line: 197 size: 28 LOC McCabe index: 4 number of parameters: 4 id: 1304 unit: void write_ascii_item() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1928 end line: 1955 size: 28 LOC McCabe index: 9 number of parameters: 5 id: 1305 unit: static void get_bgf_fields() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 136 end line: 179 size: 28 LOC McCabe index: 1 number of parameters: 11 id: 1306 unit: static int read_bgf_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 437 end line: 468 size: 28 LOC McCabe index: 3 number of parameters: 8 id: 1307 unit: static int g96_rec() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 692 end line: 729 size: 28 LOC McCabe index: 7 number of parameters: 2 id: 1308 unit: static int xtc_sizeofints() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1689 end line: 1716 size: 28 LOC McCabe index: 5 number of parameters: 2 id: 1309 unit: static int write_rst_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c start line: 239 end line: 271 size: 28 LOC McCabe index: 9 number of parameters: 2 id: 1310 unit: static int AtomInfoCompare() file: layer2/AtomInfo.cpp start line: 2023 end line: 2065 size: 28 LOC McCabe index: 29 number of parameters: 5 id: 1311 unit: static int get_protons() file: layer2/AtomInfo.cpp start line: 2345 end line: 2381 size: 28 LOC McCabe index: 9 number of parameters: 1 id: 1312 unit: void RepCartoonFlattenSheetsRefineTips() file: layer2/RepCartoon.cpp start line: 3565 end line: 3592 size: 28 LOC McCabe index: 9 number of parameters: 7 id: 1313 unit: static int ObjectCallbackAllStatesFromPyObject() file: layer2/ObjectCallback.cpp start line: 238 end line: 272 size: 28 LOC McCabe index: 4 number of parameters: 2 id: 1314 unit: static void ObjectGadgetRampBuild() file: layer2/ObjectGadgetRamp.cpp start line: 818 end line: 854 size: 28 LOC McCabe index: 2 number of parameters: 1 id: 1315 unit: int DistSetMoveLabel() file: layer2/DistSet.cpp start line: 50 end line: 81 size: 28 LOC McCabe index: 6 number of parameters: 4 id: 1316 unit: void ObjectVolumeStateInit() file: layer2/ObjectVolume.cpp start line: 1139 end line: 1167 size: 28 LOC McCabe index: 4 number of parameters: 2 id: 1317 unit: static void SurfaceJobEliminateFromVArrays() file: layer2/RepSurface.cpp start line: 3177 end line: 3204 size: 28 LOC McCabe index: 4 number of parameters: 4 id: 1318 unit: static int RepSurfaceRemoveAtomsNotWithinCutoff() file: layer2/RepSurface.cpp start line: 4055 end line: 4082 size: 28 LOC McCabe index: 9 number of parameters: 6 id: 1319 unit: int GadgetSetSetVertex() file: layer2/GadgetSet.cpp start line: 61 end line: 88 size: 28 LOC McCabe index: 8 number of parameters: 4 id: 1320 unit: void drawLineAsGeometryWithOffsets() file: layer2/RepLabel.cpp start line: 414 end line: 447 size: 28 LOC McCabe index: 1 number of parameters: 11 id: 1321 unit: static int SculptDoAvoid() file: layer2/Sculpt.cpp start line: 1613 end line: 1640 size: 28 LOC McCabe index: 4 number of parameters: 8 id: 1322 unit: PyMOLreturn_status PyMOL_CmdSetBond() file: layer5/PyMOL.cpp start line: 1021 end line: 1048 size: 28 LOC McCabe index: 7 number of parameters: 8 id: 1323 unit: PyMOLreturn_status PyMOL_CmdUnsetBond() file: layer5/PyMOL.cpp start line: 1050 end line: 1077 size: 28 LOC McCabe index: 7 number of parameters: 7 id: 1324 unit: static void MainButton() file: layer5/main.cpp start line: 438 end line: 478 size: 28 LOC McCabe index: 9 number of parameters: 4 id: 1325 unit: static void SeekerSelectionUpdateCenter() file: layer3/Seeker.cpp start line: 253 end line: 288 size: 28 LOC McCabe index: 8 number of parameters: 5 id: 1326 unit: def __init__() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 28 LOC McCabe index: 2 number of parameters: 4 id: 1327 unit: def __init__() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 28 LOC McCabe index: 1 number of parameters: 2 id: 1328 unit: def run() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 28 LOC McCabe index: 8 number of parameters: 1 id: 1329 unit: def roving() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 28 LOC McCabe index: 2 number of parameters: 2 id: 1330 unit: def sculpt() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 28 LOC McCabe index: 2 number of parameters: 2 id: 1331 unit: def _wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 28 LOC McCabe index: 6 number of parameters: 5 id: 1332 unit: def _watch() file: modules/pymol/movie.py start line: 0 end line: 0 size: 28 LOC McCabe index: 10 number of parameters: 2 id: 1333 unit: def dyna() file: modules/chempy/tinker/realtime.py start line: 0 end line: 0 size: 28 LOC McCabe index: 5 number of parameters: 2 id: 1334 unit: def sort() file: modules/chempy/models.py start line: 0 end line: 0 size: 28 LOC McCabe index: 8 number of parameters: 1 id: 1335 unit: def convert_to_indexed() file: modules/chempy/fast/__init__.py start line: 0 end line: 0 size: 28 LOC McCabe index: 6 number of parameters: 1 id: 1336 unit: def read_potential_list() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 28 LOC McCabe index: 9 number of parameters: 4 id: 1337 unit: int SettingSet_i() file: layer1/Setting.cpp start line: 1697 end line: 1723 size: 27 LOC McCabe index: 6 number of parameters: 3 id: 1338 unit: int SettingSet_f() file: layer1/Setting.cpp start line: 1771 end line: 1797 size: 27 LOC McCabe index: 6 number of parameters: 3 id: 1339 unit: static void RepRenderBox() file: layer1/Rep.cpp start line: 140 end line: 173 size: 27 LOC McCabe index: 3 number of parameters: 2 id: 1340 unit: static void RayHashSpawn() file: layer1/Ray.cpp start line: 2898 end line: 2926 size: 27 LOC McCabe index: 4 number of parameters: 3 id: 1341 unit: void CSeq::reshape() file: layer1/Seq.cpp start line: 134 end line: 164 size: 27 LOC McCabe index: 5 number of parameters: 2 id: 1342 unit: int ColorGetRamped() file: layer1/Color.cpp start line: 196 end line: 223 size: 27 LOC McCabe index: 8 number of parameters: 5 id: 1343 unit: int WizardDoKey() file: layer1/Wizard.cpp start line: 375 end line: 401 size: 27 LOC McCabe index: 8 number of parameters: 5 id: 1344 unit: int WizardDoScene() file: layer1/Wizard.cpp start line: 473 end line: 499 size: 27 LOC McCabe index: 8 number of parameters: 1 id: 1345 unit: int WizardDoDirty() file: layer1/Wizard.cpp start line: 501 end line: 527 size: 27 LOC McCabe index: 8 number of parameters: 1 id: 1346 unit: int WizardDoSpecial() file: layer1/Wizard.cpp start line: 587 end line: 614 size: 27 LOC McCabe index: 8 number of parameters: 5 id: 1347 unit: void ObjectSetTTT() file: layer1/PyMOLObject.cpp start line: 894 end line: 921 size: 27 LOC McCabe index: 9 number of parameters: 4 id: 1348 unit: static void ObjectRenderUnitBox() file: layer1/PyMOLObject.cpp start line: 1215 end line: 1247 size: 27 LOC McCabe index: 3 number of parameters: 2 id: 1349 unit: void MoviePlay() file: layer1/Movie.cpp start line: 620 end line: 650 size: 27 LOC McCabe index: 9 number of parameters: 2 id: 1350 unit: int MovieMatrix() file: layer1/Movie.cpp start line: 654 end line: 680 size: 27 LOC McCabe index: 6 number of parameters: 2 id: 1351 unit: void UtilCleanStr() file: layer0/Util.cpp start line: 176 end line: 202 size: 27 LOC McCabe index: 7 number of parameters: 1 id: 1352 unit: int WordIndex() file: layer0/Word.cpp start line: 948 end line: 975 size: 27 LOC McCabe index: 7 number of parameters: 5 id: 1353 unit: int MatchPreScore() file: layer0/Match.cpp start line: 192 end line: 223 size: 27 LOC McCabe index: 7 number of parameters: 6 id: 1354 unit: void textureBuffer_t::texture_data_1D() file: layer0/GenericBuffer.cpp start line: 196 end line: 222 size: 27 LOC McCabe index: 4 number of parameters: 2 id: 1355 unit: void OVOneToAny_Dump() file: ov/src/OVOneToAny.cpp start line: 63 end line: 90 size: 27 LOC McCabe index: 8 number of parameters: 1 id: 1356 unit: OVreturn_word OVOneToOne_GetReverse() file: ov/src/OVOneToOne.cpp start line: 153 end line: 180 size: 27 LOC McCabe index: 5 number of parameters: 2 id: 1357 unit: void ChampMatchDump() file: contrib/champ/champ.c start line: 2060 end line: 2087 size: 27 LOC McCabe index: 4 number of parameters: 2 id: 1358 unit: static int shelltype_int() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2600 end line: 2629 size: 27 LOC McCabe index: 7 number of parameters: 1 id: 1359 unit: static int read_gro_structure() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 108 end line: 140 size: 27 LOC McCabe index: 4 number of parameters: 3 id: 1360 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 1083 end line: 1109 size: 27 LOC McCabe index: 1 number of parameters: 0 id: 1361 unit: static int pass_keyline() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 917 end line: 946 size: 27 LOC McCabe index: 7 number of parameters: 3 id: 1362 unit: static void close_js_read() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1269 end line: 1302 size: 27 LOC McCabe index: 11 number of parameters: 1 id: 1363 unit: static int write_js_angles() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1815 end line: 1847 size: 27 LOC McCabe index: 5 number of parameters: 15 id: 1364 unit: void element_layout_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 234 end line: 267 size: 27 LOC McCabe index: 3 number of parameters: 5 id: 1365 unit: void get_element_setup_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 811 end line: 847 size: 27 LOC McCabe index: 3 number of parameters: 4 id: 1366 unit: static void abinit_buildrotmat() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 218 end line: 254 size: 27 LOC McCabe index: 1 number of parameters: 1 id: 1367 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1405 end line: 1438 size: 27 LOC McCabe index: 1 number of parameters: 0 id: 1368 unit: static int gro_header() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 982 end line: 1034 size: 27 LOC McCabe index: 12 number of parameters: 6 id: 1369 unit: static int read_xyz_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 151 end line: 187 size: 27 LOC McCabe index: 8 number of parameters: 3 id: 1370 unit: static int write_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 184 end line: 219 size: 27 LOC McCabe index: 6 number of parameters: 2 id: 1371 unit: void fixup_m_bond() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1554 end line: 1587 size: 27 LOC McCabe index: 7 number of parameters: 3 id: 1372 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 2014 end line: 2044 size: 27 LOC McCabe index: 1 number of parameters: 1 id: 1373 unit: def make_launch_script() file: setup.py start line: 0 end line: 0 size: 27 LOC McCabe index: 6 number of parameters: 1 id: 1374 unit: static bool RepSphereDetermineAtomVisibility() file: layer2/RepSphere.cpp start line: 264 end line: 293 size: 27 LOC McCabe index: 13 number of parameters: 4 id: 1375 unit: static float GetDistance() file: layer2/CifMoleculeReader.cpp start line: 264 end line: 294 size: 27 LOC McCabe index: 9 number of parameters: 3 id: 1376 unit: int ObjectMeshNewFromPyList() file: layer2/ObjectMesh.cpp start line: 217 end line: 248 size: 27 LOC McCabe index: 8 number of parameters: 3 id: 1377 unit: int ObjectGroupNewFromPyList() file: layer2/ObjectGroup.cpp start line: 29 end line: 56 size: 27 LOC McCabe index: 10 number of parameters: 4 id: 1378 unit: void Clip2D() file: layer2/RepLabel.cpp start line: 296 end line: 322 size: 27 LOC McCabe index: 12 number of parameters: 8 id: 1379 unit: static void MainPassive() file: layer5/main.cpp start line: 482 end line: 526 size: 27 LOC McCabe index: 9 number of parameters: 2 id: 1380 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 1630 end line: 1662 size: 27 LOC McCabe index: 5 number of parameters: 0 id: 1381 unit: def __init__() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 27 LOC McCabe index: 1 number of parameters: 4 id: 1382 unit: Matrix Cholesky::solve() file: modules/cealign/src/tnt/tnt_linalg.h start line: 191 end line: 226 size: 27 LOC McCabe index: 8 number of parameters: 1 id: 1383 unit: def __init__() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 27 LOC McCabe index: 4 number of parameters: 2 id: 1384 unit: def file_read() file: modules/pymol/internal.py start line: 0 end line: 0 size: 27 LOC McCabe index: 7 number of parameters: 2 id: 1385 unit: def _recent_filenames_lazy_init() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 27 LOC McCabe index: 6 number of parameters: 1 id: 1386 unit: def apply_arg() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 27 LOC McCabe index: 10 number of parameters: 2 id: 1387 unit: def ray_tracing() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 27 LOC McCabe index: 3 number of parameters: 4 id: 1388 unit: def auto_err() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 27 LOC McCabe index: 9 number of parameters: 3 id: 1389 unit: def delete_atom() file: modules/chempy/models.py start line: 0 end line: 0 size: 27 LOC McCabe index: 13 number of parameters: 2 id: 1390 unit: ov_status PCacheSet() file: layer1/P.cpp start line: 1164 end line: 1190 size: 26 LOC McCabe index: 6 number of parameters: 3 id: 1391 unit: void SceneSetStereo() file: layer1/Scene.cpp start line: 1011 end line: 1039 size: 26 LOC McCabe index: 9 number of parameters: 2 id: 1392 unit: int SceneCaptureWindow() file: layer1/Scene.cpp start line: 1369 end line: 1400 size: 26 LOC McCabe index: 9 number of parameters: 1 id: 1393 unit: bool call_raw_image_callback() file: layer1/Scene.cpp start line: 5675 end line: 5708 size: 26 LOC McCabe index: 2 number of parameters: 1 id: 1394 unit: void SceneResetNormalUseShaderAttribute() file: layer1/Scene.cpp start line: 6063 end line: 6088 size: 26 LOC McCabe index: 8 number of parameters: 4 id: 1395 unit: bool SettingUniqueGetTypedValuePtr() file: layer1/Setting.cpp start line: 216 end line: 245 size: 26 LOC McCabe index: 8 number of parameters: 5 id: 1396 unit: static void SettingUniqueEntry_Set() file: layer1/Setting.cpp start line: 300 end line: 325 size: 26 LOC McCabe index: 8 number of parameters: 3 id: 1397 unit: static int equal_fprnt() file: layer1/Character.cpp start line: 50 end line: 78 size: 26 LOC McCabe index: 11 number of parameters: 2 id: 1398 unit: static ov_size idtf_dump_resource_header() file: layer1/Ray.cpp start line: 1913 end line: 1941 size: 26 LOC McCabe index: 1 number of parameters: 2 id: 1399 unit: void RayAdjustZtoScreenZ() file: layer1/Ray.cpp start line: 7798 end line: 7824 size: 26 LOC McCabe index: 2 number of parameters: 3 id: 1400 unit: void OrthoBusyFast() file: layer1/Ortho.cpp start line: 554 end line: 579 size: 26 LOC McCabe index: 7 number of parameters: 3 id: 1401 unit: void OrthoRestorePrompt() file: layer1/Ortho.cpp start line: 734 end line: 759 size: 26 LOC McCabe index: 5 number of parameters: 1 id: 1402 unit: int CWizard::release() file: layer1/Wizard.cpp start line: 705 end line: 735 size: 26 LOC McCabe index: 7 number of parameters: 4 id: 1403 unit: bool SceneHas32BitColor() file: layer1/ScenePicking.cpp start line: 164 end line: 197 size: 26 LOC McCabe index: 3 number of parameters: 1 id: 1404 unit: void MovieDump() file: layer1/Movie.cpp start line: 442 end line: 468 size: 26 LOC McCabe index: 7 number of parameters: 1 id: 1405 unit: void MovieDoFrameCommand() file: layer1/Movie.cpp start line: 1108 end line: 1133 size: 26 LOC McCabe index: 10 number of parameters: 2 id: 1406 unit: int TrackerDelIter() file: layer0/Tracker.cpp start line: 505 end line: 540 size: 26 LOC McCabe index: 5 number of parameters: 2 id: 1407 unit: void CrystalDump() file: layer0/Crystal.cpp start line: 177 end line: 204 size: 26 LOC McCabe index: 3 number of parameters: 1 id: 1408 unit: static OVstatus OVLexicon_CheckStorage() file: ov/src/OVLexicon.cpp start line: 63 end line: 90 size: 26 LOC McCabe index: 7 number of parameters: 3 id: 1409 unit: static void UtilCleanStr() file: contrib/champ/champ.c start line: 1215 end line: 1240 size: 26 LOC McCabe index: 7 number of parameters: 1 id: 1410 unit: static int PConvPyObjectToStrMaxClean() file: contrib/champ/champ.c start line: 1242 end line: 1267 size: 26 LOC McCabe index: 5 number of parameters: 3 id: 1411 unit: static int get_mdf_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 89 end line: 127 size: 26 LOC McCabe index: 9 number of parameters: 2 id: 1412 unit: static void rot() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 617 end line: 645 size: 26 LOC McCabe index: 4 number of parameters: 3 id: 1413 unit: static int write_js_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1735 end line: 1766 size: 26 LOC McCabe index: 6 number of parameters: 8 id: 1414 unit: static void close_js_write() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1911 end line: 1943 size: 26 LOC McCabe index: 9 number of parameters: 1 id: 1415 unit: static int read_tinker_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c start line: 119 end line: 154 size: 26 LOC McCabe index: 7 number of parameters: 3 id: 1416 unit: void delete_pdbxParser() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 253 end line: 278 size: 26 LOC McCabe index: 7 number of parameters: 1 id: 1417 unit: static int read_charmm_extrablock() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 424 end line: 454 size: 26 LOC McCabe index: 12 number of parameters: 4 id: 1418 unit: int DtrReader::frame() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1697 end line: 1725 size: 26 LOC McCabe index: 4 number of parameters: 2 id: 1419 unit: static int write_structure() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1275 end line: 1316 size: 26 LOC McCabe index: 10 number of parameters: 3 id: 1420 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp start line: 344 end line: 376 size: 26 LOC McCabe index: 4 number of parameters: 2 id: 1421 unit: static int read_qm_timestep_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 417 end line: 454 size: 26 LOC McCabe index: 6 number of parameters: 2 id: 1422 unit: static int read_molden_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 547 end line: 582 size: 26 LOC McCabe index: 3 number of parameters: 2 id: 1423 unit: static void get_pdb_coordinates() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 137 end line: 167 size: 26 LOC McCabe index: 6 number of parameters: 6 id: 1424 unit: void set_box() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 710 end line: 737 size: 26 LOC McCabe index: 2 number of parameters: 1 id: 1425 unit: void AtomInfoCopy() file: layer2/AtomInfo.cpp start line: 1028 end line: 1055 size: 26 LOC McCabe index: 5 number of parameters: 4 id: 1426 unit: void ObjectMeshStateInit() file: layer2/ObjectMesh.cpp start line: 1186 end line: 1211 size: 26 LOC McCabe index: 4 number of parameters: 2 id: 1427 unit: int ObjectAlignmentNewFromPyList() file: layer2/ObjectAlignment.cpp start line: 827 end line: 855 size: 26 LOC McCabe index: 8 number of parameters: 4 id: 1428 unit: int ObjectCGONewFromPyList() file: layer2/ObjectCGO.cpp start line: 115 end line: 143 size: 26 LOC McCabe index: 8 number of parameters: 4 id: 1429 unit: static int SolventDotFilterOutSameXYZ() file: layer2/RepSurface.cpp start line: 4462 end line: 4488 size: 26 LOC McCabe index: 12 number of parameters: 8 id: 1430 unit: short InvalidateShaderCGOIfTextureNeedsUpdate() file: layer2/RepLabel.cpp start line: 109 end line: 136 size: 26 LOC McCabe index: 9 number of parameters: 4 id: 1431 unit: int ObjectMapInterpolate() file: layer2/ObjectMap.cpp start line: 439 end line: 473 size: 26 LOC McCabe index: 7 number of parameters: 6 id: 1432 unit: PyMOLreturn_status PyMOL_CmdIsosurface() file: layer5/PyMOL.cpp start line: 1367 end line: 1393 size: 26 LOC McCabe index: 6 number of parameters: 12 id: 1433 unit: PyMOLreturn_status PyMOL_CmdGradient() file: layer5/PyMOL.cpp start line: 1395 end line: 1421 size: 26 LOC McCabe index: 6 number of parameters: 11 id: 1434 unit: PyMOLreturn_status PyMOL_SetMouseButtonMode() file: layer5/PyMOL.cpp start line: 3302 end line: 3330 size: 26 LOC McCabe index: 4 number of parameters: 2 id: 1435 unit: void MainCheckWindowFit() file: layer5/main.cpp start line: 1376 end line: 1404 size: 26 LOC McCabe index: 9 number of parameters: 1 id: 1436 unit: int EditorGetSinglePicked() file: layer3/Editor.cpp start line: 463 end line: 488 size: 26 LOC McCabe index: 9 number of parameters: 2 id: 1437 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 469 end line: 500 size: 26 LOC McCabe index: 8 number of parameters: 0 id: 1438 unit: this._apply = function() file: modules/web/javascript/pymol.js start line: 190 end line: 219 size: 26 LOC McCabe index: 7 number of parameters: 4 id: 1439 unit: def wheelEvent() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 26 LOC McCabe index: 7 number of parameters: 2 id: 1440 unit: def generatePqrFile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 26 LOC McCabe index: 11 number of parameters: 1 id: 1441 unit: def info_repo_plugin() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 26 LOC McCabe index: 4 number of parameters: 1 id: 1442 unit: def ramp_to_colors() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 26 LOC McCabe index: 9 number of parameters: 4 id: 1443 unit: def mol_labels() file: modules/pymol/menu.py start line: 0 end line: 0 size: 26 LOC McCabe index: 1 number of parameters: 2 id: 1444 unit: def rpcHelp() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 26 LOC McCabe index: 7 number of parameters: 1 id: 1445 unit: def rock() file: modules/pymol/movie.py start line: 0 end line: 0 size: 26 LOC McCabe index: 5 number of parameters: 7 id: 1446 unit: def nutate() file: modules/pymol/movie.py start line: 0 end line: 0 size: 26 LOC McCabe index: 4 number of parameters: 7 id: 1447 unit: def _rock() file: modules/pymol/movie.py start line: 0 end line: 0 size: 26 LOC McCabe index: 7 number of parameters: 7 id: 1448 unit: def rebuild() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 26 LOC McCabe index: 14 number of parameters: 2 id: 1449 unit: def spectrum() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 26 LOC McCabe index: 5 number of parameters: 7 id: 1450 unit: def __init__() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 26 LOC McCabe index: 4 number of parameters: 2 id: 1451 unit: def dump_missing() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 26 LOC McCabe index: 14 number of parameters: 2 id: 1452 unit: def from_indexed() file: modules/chempy/fast/__init__.py start line: 0 end line: 0 size: 26 LOC McCabe index: 3 number of parameters: 2 id: 1453 unit: def _set() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 26 LOC McCabe index: 9 number of parameters: 3 id: 1454 unit: void SceneAdjustZtoScreenZ() file: layer1/Scene.cpp start line: 7252 end line: 7278 size: 25 LOC McCabe index: 2 number of parameters: 3 id: 1455 unit: int CharacterFind() file: layer1/Character.cpp start line: 80 end line: 121 size: 25 LOC McCabe index: 5 number of parameters: 2 id: 1456 unit: void PopFitBlock() file: layer1/Pop.cpp start line: 82 end line: 110 size: 25 LOC McCabe index: 5 number of parameters: 1 id: 1457 unit: int ControlSdofButton() file: layer1/Control.cpp start line: 83 end line: 107 size: 25 LOC McCabe index: 6 number of parameters: 2 id: 1458 unit: int ControlRock() file: layer1/Control.cpp start line: 426 end line: 450 size: 25 LOC McCabe index: 7 number of parameters: 2 id: 1459 unit: void OrthoBusySlow() file: layer1/Ortho.cpp start line: 524 end line: 550 size: 25 LOC McCabe index: 5 number of parameters: 3 id: 1460 unit: void OrthoParseCurrentLine() file: layer1/Ortho.cpp start line: 1034 end line: 1060 size: 25 LOC McCabe index: 3 number of parameters: 1 id: 1461 unit: int PConvPyObjectToStrMaxClean() file: layer1/PConv.cpp start line: 423 end line: 447 size: 25 LOC McCabe index: 5 number of parameters: 3 id: 1462 unit: float TypeFaceGetKerning() file: layer1/TypeFace.cpp start line: 95 end line: 121 size: 25 LOC McCabe index: 5 number of parameters: 4 id: 1463 unit: static void ColladaWriteAssetElement() file: layer1/COLLADA.cpp start line: 98 end line: 125 size: 25 LOC McCabe index: 1 number of parameters: 1 id: 1464 unit: static void ColladaWriteLibraryEffects() file: layer1/COLLADA.cpp start line: 338 end line: 371 size: 25 LOC McCabe index: 3 number of parameters: 4 id: 1465 unit: static unsigned int next_utf8_character() file: layer1/FontGLUT.cpp start line: 77 end line: 109 size: 25 LOC McCabe index: 7 number of parameters: 2 id: 1466 unit: int MoviePurgeFrame() file: layer1/Movie.cpp start line: 390 end line: 414 size: 25 LOC McCabe index: 5 number of parameters: 2 id: 1467 unit: int WordMatchNoWild() file: layer0/Word.cpp start line: 717 end line: 749 size: 25 LOC McCabe index: 11 number of parameters: 4 id: 1468 unit: void PyMOLDrawPixels() file: layer0/os_gl.cpp start line: 57 end line: 92 size: 25 LOC McCabe index: 1 number of parameters: 5 id: 1469 unit: void convertTTTfR44d() file: layer0/Vector.cpp start line: 866 end line: 901 size: 25 LOC McCabe index: 1 number of parameters: 2 id: 1470 unit: void convertTTTfR44f() file: layer0/Vector.cpp start line: 903 end line: 934 size: 25 LOC McCabe index: 1 number of parameters: 2 id: 1471 unit: bool seqBufferData() file: layer0/GenericBuffer.h start line: 329 end line: 358 size: 25 LOC McCabe index: 4 number of parameters: 0 id: 1472 unit: int ChampExact_1VN_N() file: contrib/champ/champ.c start line: 1953 end line: 1980 size: 25 LOC McCabe index: 5 number of parameters: 3 id: 1473 unit: static int read_gamess_structure() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 451 end line: 495 size: 25 LOC McCabe index: 2 number of parameters: 3 id: 1474 unit: static int read_coeff_block() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 3918 end line: 3958 size: 25 LOC McCabe index: 5 number of parameters: 4 id: 1475 unit: static fio_size_t fio_fseek() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 184 end line: 218 size: 25 LOC McCabe index: 4 number of parameters: 3 id: 1476 unit: void describe_property_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2776 end line: 2807 size: 25 LOC McCabe index: 2 number of parameters: 2 id: 1477 unit: static int read_fixed_atoms() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 456 end line: 490 size: 25 LOC McCabe index: 11 number of parameters: 9 id: 1478 unit: int DtrReader::frame_from_bytes() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1727 end line: 1758 size: 25 LOC McCabe index: 11 number of parameters: 3 id: 1479 unit: static void swap8_unaligned() file: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h start line: 65 end line: 91 size: 25 LOC McCabe index: 2 number of parameters: 2 id: 1480 unit: static void xtc_receiveints() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1753 end line: 1778 size: 25 LOC McCabe index: 5 number of parameters: 5 id: 1481 unit: static int read_vaspoutcar_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c start line: 224 end line: 256 size: 25 LOC McCabe index: 9 number of parameters: 3 id: 1482 unit: static int cube_readbox() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 71 end line: 104 size: 25 LOC McCabe index: 5 number of parameters: 4 id: 1483 unit: int read_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1798 end line: 1824 size: 25 LOC McCabe index: 3 number of parameters: 5 id: 1484 unit: bool MMTF_unpack_from_file() file: contrib/mmtf-c/mmtf_parser.cpp start line: 1010 end line: 1045 size: 25 LOC McCabe index: 3 number of parameters: 2 id: 1485 unit: static void RepSphereCGOSetSphereColorAndPick() file: layer2/RepSphere.cpp start line: 353 end line: 380 size: 25 LOC McCabe index: 4 number of parameters: 7 id: 1486 unit: static bool read_chem_comp_bond_dict() file: layer2/CifMoleculeReader.cpp start line: 315 end line: 348 size: 25 LOC McCabe index: 7 number of parameters: 2 id: 1487 unit: int ObjectVolumeNewFromPyList() file: layer2/ObjectVolume.cpp start line: 258 end line: 285 size: 25 LOC McCabe index: 8 number of parameters: 3 id: 1488 unit: int ObjectVolumeAddSlicePoint() file: layer2/ObjectVolume.cpp start line: 1079 end line: 1107 size: 25 LOC McCabe index: 3 number of parameters: 9 id: 1489 unit: static int AlignmentFindTag() file: layer2/ObjectAlignment.cpp start line: 101 end line: 125 size: 25 LOC McCabe index: 9 number of parameters: 4 id: 1490 unit: int ObjectSurfaceNewFromPyList() file: layer2/ObjectSurface.cpp start line: 183 end line: 211 size: 25 LOC McCabe index: 8 number of parameters: 3 id: 1491 unit: bool IsBondTerminal() file: layer2/RepWireBond.cpp start line: 450 end line: 474 size: 25 LOC McCabe index: 8 number of parameters: 3 id: 1492 unit: OV_INLINE ov_status SurfaceJobResultFromTuple() file: layer2/RepSurface.cpp start line: 3019 end line: 3044 size: 25 LOC McCabe index: 9 number of parameters: 3 id: 1493 unit: static int SurfaceJobRefineCopyNewPoints() file: layer2/RepSurface.cpp start line: 3351 end line: 3375 size: 25 LOC McCabe index: 5 number of parameters: 3 id: 1494 unit: static int SolventDotMarkDotsWithinCutoff() file: layer2/RepSurface.cpp start line: 4637 end line: 4661 size: 25 LOC McCabe index: 8 number of parameters: 8 id: 1495 unit: int ObjectSliceNewFromPyList() file: layer2/ObjectSlice.cpp start line: 158 end line: 188 size: 25 LOC McCabe index: 8 number of parameters: 3 id: 1496 unit: static int VFontRecLoad() file: layer2/VFont.cpp start line: 229 end line: 254 size: 25 LOC McCabe index: 4 number of parameters: 2 id: 1497 unit: int SculptCacheQuery() file: layer2/SculptCache.cpp start line: 72 end line: 96 size: 25 LOC McCabe index: 9 number of parameters: 7 id: 1498 unit: int ObjectMapTrim() file: layer2/ObjectMap.cpp start line: 982 end line: 1009 size: 25 LOC McCabe index: 9 number of parameters: 5 id: 1499 unit: int ObjectMapNewFromPyList() file: layer2/ObjectMap.cpp start line: 1567 end line: 1597 size: 25 LOC McCabe index: 8 number of parameters: 3 id: 1500 unit: PyMOLreturn_status PyMOL_CmdIsodot() file: layer5/PyMOL.cpp start line: 1313 end line: 1339 size: 25 LOC McCabe index: 6 number of parameters: 10 id: 1501 unit: PyMOLreturn_status PyMOL_CmdIsomesh() file: layer5/PyMOL.cpp start line: 1341 end line: 1365 size: 25 LOC McCabe index: 6 number of parameters: 10 id: 1502 unit: static int TestPyMOL_00_00() file: layer5/TestPyMOL.cpp start line: 41 end line: 70 size: 25 LOC McCabe index: 4 number of parameters: 1 id: 1503 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 25 LOC McCabe index: 4 number of parameters: 1 id: 1504 unit: pcePoint getCoords() file: modules/cealign/src/ccealignmodule.cpp start line: 118 end line: 152 size: 25 LOC McCabe index: 3 number of parameters: 2 id: 1505 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 25 LOC McCabe index: 4 number of parameters: 1 id: 1506 unit: def _special() file: modules/pymol/internal.py start line: 0 end line: 0 size: 25 LOC McCabe index: 10 number of parameters: 5 id: 1507 unit: def __init__() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 25 LOC McCabe index: 2 number of parameters: 2 id: 1508 unit: def sculpt() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 25 LOC McCabe index: 2 number of parameters: 2 id: 1509 unit: def get_panel() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 25 LOC McCabe index: 1 number of parameters: 1 id: 1510 unit: def setup_environ() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 25 LOC McCabe index: 9 number of parameters: 0 id: 1511 unit: def __init__() file: modules/pymol/headering.py start line: 0 end line: 0 size: 25 LOC McCabe index: 1 number of parameters: 2 id: 1512 unit: def main_menu() file: modules/pymol/menu.py start line: 0 end line: 0 size: 25 LOC McCabe index: 1 number of parameters: 3 id: 1513 unit: def pick_sele() file: modules/pymol/menu.py start line: 0 end line: 0 size: 25 LOC McCabe index: 1 number of parameters: 3 id: 1514 unit: def _nutate_sub() file: modules/pymol/movie.py start line: 0 end line: 0 size: 25 LOC McCabe index: 5 number of parameters: 9 id: 1515 unit: def dump() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 25 LOC McCabe index: 7 number of parameters: 1 id: 1516 unit: def write_tinker_prm() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 25 LOC McCabe index: 4 number of parameters: 4 id: 1517 unit: def assign_names() file: modules/chempy/models.py start line: 0 end line: 0 size: 25 LOC McCabe index: 11 number of parameters: 2 id: 1518 unit: def rotation_matrix() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 25 LOC McCabe index: 2 number of parameters: 2 id: 1519 unit: def read_ss_() file: modules/chempy/cif.py start line: 0 end line: 0 size: 25 LOC McCabe index: 6 number of parameters: 4 id: 1520 unit: def readTree() file: modules/chempy/cex.py start line: 0 end line: 0 size: 25 LOC McCabe index: 13 number of parameters: 1 id: 1521 unit: def measure_all_torsions() file: data/chempy/sidechains/generate1.py start line: 0 end line: 0 size: 25 LOC McCabe index: 7 number of parameters: 2 id: 1522 unit: void ExtrudeDumbbellEdge() file: layer1/Extrude.cpp start line: 390 end line: 415 size: 24 LOC McCabe index: 4 number of parameters: 4 id: 1523 unit: static int FrontToInteriorSphereCapped() file: layer1/Basis.cpp start line: 1079 end line: 1107 size: 24 LOC McCabe index: 3 number of parameters: 8 id: 1524 unit: int SceneLoopRelease() file: layer1/Scene.cpp start line: 507 end line: 531 size: 24 LOC McCabe index: 3 number of parameters: 5 id: 1525 unit: void SceneResetNormalUseShader() file: layer1/Scene.cpp start line: 6038 end line: 6061 size: 24 LOC McCabe index: 7 number of parameters: 3 id: 1526 unit: int SceneGetDrawFlag() file: layer1/Scene.cpp start line: 6231 end line: 6254 size: 24 LOC McCabe index: 11 number of parameters: 3 id: 1527 unit: bool SettingUniqueUnset() file: layer1/Setting.cpp start line: 330 end line: 356 size: 24 LOC McCabe index: 6 number of parameters: 3 id: 1528 unit: int SettingSet_s() file: layer1/Setting.cpp start line: 1801 end line: 1824 size: 24 LOC McCabe index: 4 number of parameters: 3 id: 1529 unit: int CSeq::release() file: layer1/Seq.cpp start line: 198 end line: 221 size: 24 LOC McCabe index: 7 number of parameters: 4 id: 1530 unit: unsigned int ColorGet32BitWord() file: layer1/Color.cpp start line: 115 end line: 141 size: 24 LOC McCabe index: 6 number of parameters: 2 id: 1531 unit: void ColorRegisterExt() file: layer1/Color.cpp start line: 285 end line: 309 size: 24 LOC McCabe index: 4 number of parameters: 4 id: 1532 unit: void ButModeSetRate() file: layer1/ButMode.cpp start line: 102 end line: 127 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1533 unit: int OrthoDrag() file: layer1/Ortho.cpp start line: 2417 end line: 2444 size: 24 LOC McCabe index: 6 number of parameters: 4 id: 1534 unit: int PConvPyListToDoubleArray() file: layer1/PConv.cpp start line: 636 end line: 659 size: 24 LOC McCabe index: 5 number of parameters: 2 id: 1535 unit: int TypeFaceCharacterNew() file: layer1/TypeFace.cpp start line: 38 end line: 62 size: 24 LOC McCabe index: 3 number of parameters: 3 id: 1536 unit: static void ColladaWriteVNCInputs() file: layer1/COLLADA.cpp start line: 477 end line: 502 size: 24 LOC McCabe index: 1 number of parameters: 2 id: 1537 unit: int MovieGetPanelHeight() file: layer1/Movie.cpp start line: 1793 end line: 1818 size: 24 LOC McCabe index: 5 number of parameters: 1 id: 1538 unit: int TrackerNewCand() file: layer0/Tracker.cpp start line: 198 end line: 223 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1539 unit: int TrackerNewList() file: layer0/Tracker.cpp start line: 225 end line: 248 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1540 unit: void CShaderPrg::SetBgUniforms() file: layer0/ShaderPrg.cpp start line: 441 end line: 470 size: 24 LOC McCabe index: 4 number of parameters: 0 id: 1541 unit: static int TetsurfCodeVertices() file: layer0/Tetsurf.cpp start line: 1499 end line: 1523 size: 24 LOC McCabe index: 7 number of parameters: 1 id: 1542 unit: int MatrixEigensolveC33d() file: layer0/Matrix.cpp start line: 1585 end line: 1619 size: 24 LOC McCabe index: 3 number of parameters: 5 id: 1543 unit: static int IsosurfAlloc() file: layer0/Isosurf.cpp start line: 994 end line: 1019 size: 24 LOC McCabe index: 5 number of parameters: 2 id: 1544 unit: int StrBlockNewStr() file: contrib/champ/strblock.c start line: 52 end line: 75 size: 24 LOC McCabe index: 3 number of parameters: 3 id: 1545 unit: static void merge_lineages() file: contrib/champ/champ.c start line: 420 end line: 446 size: 24 LOC McCabe index: 5 number of parameters: 5 id: 1546 unit: void ChampPatReindex() file: contrib/champ/champ.c start line: 1747 end line: 1770 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1547 unit: static int vmdcon_printf() file: contrib/uiuc/plugins/include/vmdconio.h start line: 56 end line: 91 size: 24 LOC McCabe index: 3 number of parameters: 3 id: 1548 unit: static int get_symmetry() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2001 end line: 2035 size: 24 LOC McCabe index: 3 number of parameters: 1 id: 1549 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 745 end line: 770 size: 24 LOC McCabe index: 5 number of parameters: 2 id: 1550 unit: static int psf_get_dihedrals_impropers() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 533 end line: 559 size: 24 LOC McCabe index: 9 number of parameters: 4 id: 1551 unit: static int write_angles() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 989 end line: 1019 size: 24 LOC McCabe index: 1 number of parameters: 20 id: 1552 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 678 end line: 701 size: 24 LOC McCabe index: 1 number of parameters: 0 id: 1553 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c start line: 196 end line: 222 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1554 unit: static int read_grid_data() file: contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp start line: 167 end line: 199 size: 24 LOC McCabe index: 4 number of parameters: 4 id: 1555 unit: static int read_vaspxml_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c start line: 192 end line: 225 size: 24 LOC McCabe index: 8 number of parameters: 3 id: 1556 unit: static int read_binary_dx_data() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 233 end line: 258 size: 24 LOC McCabe index: 5 number of parameters: 3 id: 1557 unit: VMDEXTERNSTATIC int hash_delete() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 183 end line: 216 size: 24 LOC McCabe index: 8 number of parameters: 2 id: 1558 unit: VMDEXTERNSTATIC int inthash_delete() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 182 end line: 215 size: 24 LOC McCabe index: 8 number of parameters: 2 id: 1559 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2275 end line: 2302 size: 24 LOC McCabe index: 1 number of parameters: 1 id: 1560 unit: static int g96_header() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 599 end line: 658 size: 24 LOC McCabe index: 12 number of parameters: 4 id: 1561 unit: static int trx_string() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1361 end line: 1387 size: 24 LOC McCabe index: 10 number of parameters: 3 id: 1562 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 297 end line: 323 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1563 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 753 end line: 779 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1564 unit: static int read_vasp5xdatcar_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c start line: 210 end line: 245 size: 24 LOC McCabe index: 6 number of parameters: 3 id: 1565 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 266 end line: 290 size: 24 LOC McCabe index: 5 number of parameters: 2 id: 1566 unit: static void cube_buildrotmat() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 107 end line: 136 size: 24 LOC McCabe index: 3 number of parameters: 4 id: 1567 unit: static void vasp_buildrotmat() file: contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h start line: 79 end line: 108 size: 24 LOC McCabe index: 1 number of parameters: 1 id: 1568 unit: void AtomInfoPrimeColors() file: layer2/AtomInfo.cpp start line: 1338 end line: 1369 size: 24 LOC McCabe index: 1 number of parameters: 1 id: 1569 unit: int CartoonExtrudeRect() file: layer2/RepCartoon.cpp start line: 2310 end line: 2333 size: 24 LOC McCabe index: 9 number of parameters: 6 id: 1570 unit: int ObjectGadgetInitFromPyList() file: layer2/ObjectGadget.cpp start line: 295 end line: 323 size: 24 LOC McCabe index: 10 number of parameters: 4 id: 1571 unit: static void ObjectSurfaceRenderUnOptimizedTransparency() file: layer2/ObjectSurface.cpp start line: 734 end line: 759 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 1572 unit: void RepSurfaceFree() file: layer2/RepSurface.cpp start line: 93 end line: 116 size: 24 LOC McCabe index: 2 number of parameters: 1 id: 1573 unit: bool MOLV3000ReadKeyValue() file: layer2/MolV3000.cpp start line: 68 end line: 99 size: 24 LOC McCabe index: 11 number of parameters: 3 id: 1574 unit: int ObjectDistGetLabelTxfVertex() file: layer2/ObjectDist.cpp start line: 43 end line: 66 size: 24 LOC McCabe index: 8 number of parameters: 4 id: 1575 unit: int ObjectDistNewFromPyList() file: layer2/ObjectDist.cpp start line: 375 end line: 404 size: 24 LOC McCabe index: 7 number of parameters: 3 id: 1576 unit: static int SculptCheckAvoid() file: layer2/Sculpt.cpp start line: 1585 end line: 1608 size: 24 LOC McCabe index: 5 number of parameters: 6 id: 1577 unit: int ObjectMapStateSetBorder() file: layer2/ObjectMap.cpp start line: 1745 end line: 1771 size: 24 LOC McCabe index: 7 number of parameters: 2 id: 1578 unit: PyMOLreturn_status PyMOL_CmdRay() file: layer5/PyMOL.cpp start line: 676 end line: 699 size: 24 LOC McCabe index: 4 number of parameters: 9 id: 1579 unit: PyMOLreturn_status PyMOL_CmdSetView() file: layer5/PyMOL.cpp start line: 701 end line: 724 size: 24 LOC McCabe index: 3 number of parameters: 5 id: 1580 unit: PyMOLreturn_int_array PyMOL_GetImageDataReturned() file: layer5/PyMOL.cpp start line: 2891 end line: 2915 size: 24 LOC McCabe index: 3 number of parameters: 6 id: 1581 unit: void MaeExportGetRibbonColor() file: layer3/MaeExportHelpers.cpp start line: 122 end line: 149 size: 24 LOC McCabe index: 5 number of parameters: 3 id: 1582 unit: function PyMOL() file: modules/web/javascript/pymol.js start line: 6 end line: 1100 size: 24 LOC McCabe index: 3 number of parameters: 4 id: 1583 unit: TNT::Array2D getQ() file: modules/cealign/src/tnt/jama_qr.h start line: 183 end line: 207 size: 24 LOC McCabe index: 7 number of parameters: 0 id: 1584 unit: Matrix getQ() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1712 end line: 1736 size: 24 LOC McCabe index: 7 number of parameters: 0 id: 1585 unit: def file_open() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 24 LOC McCabe index: 10 number of parameters: 2 id: 1586 unit: def _mpng() file: modules/pymol/internal.py start line: 0 end line: 0 size: 24 LOC McCabe index: 5 number of parameters: 11 id: 1587 unit: def symmetry_copy() file: modules/pymol/editing.py start line: 0 end line: 0 size: 24 LOC McCabe index: 4 number of parameters: 8 id: 1588 unit: def _processFASTA() file: modules/pymol/importing.py start line: 0 end line: 0 size: 24 LOC McCabe index: 8 number of parameters: 4 id: 1589 unit: def initialize() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 24 LOC McCabe index: 8 number of parameters: 1 id: 1590 unit: def label_chains() file: modules/pymol/util.py start line: 0 end line: 0 size: 24 LOC McCabe index: 9 number of parameters: 2 id: 1591 unit: def label_segments() file: modules/pymol/util.py start line: 0 end line: 0 size: 24 LOC McCabe index: 9 number of parameters: 2 id: 1592 unit: def get_panel() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 24 LOC McCabe index: 3 number of parameters: 1 id: 1593 unit: def sele_action2() file: modules/pymol/menu.py start line: 0 end line: 0 size: 24 LOC McCabe index: 1 number of parameters: 2 id: 1594 unit: def interpret() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 24 LOC McCabe index: 11 number of parameters: 3 id: 1595 unit: def delete_atom() file: modules/chempy/models.py start line: 0 end line: 0 size: 24 LOC McCabe index: 12 number of parameters: 2 id: 1596 unit: def __delitem__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 24 LOC McCabe index: 7 number of parameters: 2 id: 1597 unit: def __setitem__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 24 LOC McCabe index: 7 number of parameters: 3 id: 1598 unit: int SceneCountFrames() file: layer1/Scene.cpp start line: 1957 end line: 1979 size: 23 LOC McCabe index: 6 number of parameters: 1 id: 1599 unit: static void SceneObjectUpdateSpawn() file: layer1/Scene.cpp start line: 6328 end line: 6351 size: 23 LOC McCabe index: 4 number of parameters: 4 id: 1600 unit: int PConvPyListToDoubleArrayInPlace() file: layer1/PConv.cpp start line: 747 end line: 770 size: 23 LOC McCabe index: 6 number of parameters: 3 id: 1601 unit: int PConvPyListToFloatArrayInPlace() file: layer1/PConv.cpp start line: 772 end line: 795 size: 23 LOC McCabe index: 7 number of parameters: 3 id: 1602 unit: int PConvPyListToIntArrayInPlaceAutoZero() file: layer1/PConv.cpp start line: 855 end line: 877 size: 23 LOC McCabe index: 7 number of parameters: 3 id: 1603 unit: int PConvPyListToSIntArrayInPlaceAutoZero() file: layer1/PConv.cpp start line: 879 end line: 901 size: 23 LOC McCabe index: 7 number of parameters: 3 id: 1604 unit: int PConvPyListToSCharArrayInPlaceAutoZero() file: layer1/PConv.cpp start line: 903 end line: 925 size: 23 LOC McCabe index: 7 number of parameters: 3 id: 1605 unit: int PConvPyListToFloatArrayInPlaceAutoZero() file: layer1/PConv.cpp start line: 927 end line: 949 size: 23 LOC McCabe index: 7 number of parameters: 3 id: 1606 unit: int ObjectMotionModify() file: layer1/PyMOLObject.cpp start line: 85 end line: 109 size: 23 LOC McCabe index: 10 number of parameters: 7 id: 1607 unit: int ObjectCopyHeader() file: layer1/PyMOLObject.cpp start line: 798 end line: 823 size: 23 LOC McCabe index: 2 number of parameters: 2 id: 1608 unit: bool cstrlessnat() file: layer0/Util2.cpp start line: 43 end line: 72 size: 23 LOC McCabe index: 11 number of parameters: 2 id: 1609 unit: void CShaderPrg::Set_Specular_Values() file: layer0/ShaderPrg.cpp start line: 412 end line: 439 size: 23 LOC McCabe index: 3 number of parameters: 0 id: 1610 unit: void getGLSLVersion() file: layer0/ShaderMgr.cpp start line: 853 end line: 882 size: 23 LOC McCabe index: 10 number of parameters: 3 id: 1611 unit: void CShaderMgr::bindOffscreenOITFBO() file: layer0/ShaderMgr.cpp start line: 1884 end line: 1906 size: 23 LOC McCabe index: 5 number of parameters: 1 id: 1612 unit: void textureBuffer_t::texture_data_2D() file: layer0/GenericBuffer.cpp start line: 224 end line: 246 size: 23 LOC McCabe index: 4 number of parameters: 3 id: 1613 unit: float get_dihedral3f() file: layer0/Vector.cpp start line: 1623 end line: 1646 size: 23 LOC McCabe index: 5 number of parameters: 4 id: 1614 unit: void MapLocus() file: layer0/Map.cpp start line: 662 end line: 690 size: 23 LOC McCabe index: 7 number of parameters: 5 id: 1615 unit: static void TriangleEdgeSetStatus() file: layer0/Triangle.cpp start line: 494 end line: 519 size: 23 LOC McCabe index: 6 number of parameters: 4 id: 1616 unit: void MatrixRotateC44f() file: layer0/Matrix.cpp start line: 880 end line: 902 size: 23 LOC McCabe index: 1 number of parameters: 5 id: 1617 unit: __inline__ static int inline_within3fsq() file: layer0/Vector.h start line: 476 end line: 499 size: 23 LOC McCabe index: 5 number of parameters: 4 id: 1618 unit: static int unrelated_lineage() file: contrib/champ/champ.c start line: 462 end line: 486 size: 23 LOC McCabe index: 3 number of parameters: 3 id: 1619 unit: static int PConvPyListToFloatArrayInPlace() file: contrib/champ/champ.c start line: 1310 end line: 1333 size: 23 LOC McCabe index: 6 number of parameters: 3 id: 1620 unit: void OSMemoryDump() file: contrib/champ/os_memory.c start line: 105 end line: 128 size: 23 LOC McCabe index: 4 number of parameters: 1 id: 1621 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 577 end line: 599 size: 23 LOC McCabe index: 1 number of parameters: 0 id: 1622 unit: static int get_guess_options() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2383 end line: 2422 size: 23 LOC McCabe index: 2 number of parameters: 1 id: 1623 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4856 end line: 4881 size: 23 LOC McCabe index: 1 number of parameters: 1 id: 1624 unit: static int vtf_read_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 1193 end line: 1218 size: 23 LOC McCabe index: 2 number of parameters: 8 id: 1625 unit: static int read_js_angles() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1081 end line: 1108 size: 23 LOC McCabe index: 1 number of parameters: 15 id: 1626 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 710 end line: 735 size: 23 LOC McCabe index: 1 number of parameters: 1 id: 1627 unit: void ply_get_property() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 862 end line: 891 size: 23 LOC McCabe index: 2 number of parameters: 3 id: 1628 unit: static void read_homebox() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1220 end line: 1256 size: 23 LOC McCabe index: 10 number of parameters: 2 id: 1629 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 640 end line: 662 size: 23 LOC McCabe index: 1 number of parameters: 0 id: 1630 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 582 end line: 604 size: 23 LOC McCabe index: 1 number of parameters: 0 id: 1631 unit: static void abinit_header_free() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 167 end line: 192 size: 23 LOC McCabe index: 16 number of parameters: 1 id: 1632 unit: static int write_xyz_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 224 end line: 249 size: 23 LOC McCabe index: 3 number of parameters: 2 id: 1633 unit: int RepSphereSameVis() file: layer2/RepSphere.cpp start line: 239 end line: 262 size: 23 LOC McCabe index: 6 number of parameters: 2 id: 1634 unit: void AtomInfoPurge() file: layer2/AtomInfo.cpp start line: 1083 end line: 1106 size: 23 LOC McCabe index: 5 number of parameters: 2 id: 1635 unit: static bool read_pdbx_coordinate_model() file: layer2/CifMoleculeReader.cpp start line: 763 end line: 796 size: 23 LOC McCabe index: 8 number of parameters: 3 id: 1636 unit: static void ObjectMeshInvalidate() file: layer2/ObjectMesh.cpp start line: 371 end line: 396 size: 23 LOC McCabe index: 8 number of parameters: 4 id: 1637 unit: void DistSet::fFree() file: layer2/DistSet.cpp start line: 508 end line: 533 size: 23 LOC McCabe index: 5 number of parameters: 0 id: 1638 unit: static int ObjectAlignmentStateFromPyList() file: layer2/ObjectAlignment.cpp start line: 780 end line: 805 size: 23 LOC McCabe index: 9 number of parameters: 4 id: 1639 unit: static void SurfaceJobSetProbeRadius() file: layer2/RepSurface.cpp start line: 3545 end line: 3568 size: 23 LOC McCabe index: 7 number of parameters: 6 id: 1640 unit: int GadgetSetGetVertex() file: layer2/GadgetSet.cpp start line: 37 end line: 59 size: 23 LOC McCabe index: 6 number of parameters: 4 id: 1641 unit: static int count_branch() file: layer2/Sculpt.cpp start line: 282 end line: 305 size: 23 LOC McCabe index: 8 number of parameters: 3 id: 1642 unit: int ObjectMoleculeDoesAtomNeighborSele() file: layer2/ObjectMolecule2.cpp start line: 822 end line: 845 size: 23 LOC McCabe index: 5 number of parameters: 3 id: 1643 unit: PyMOLreturn_float_array PyMOL_CmdGetView() file: layer5/PyMOL.cpp start line: 726 end line: 748 size: 23 LOC McCabe index: 3 number of parameters: 2 id: 1644 unit: void MainRunCommand() file: layer5/main.cpp start line: 96 end line: 120 size: 23 LOC McCabe index: 7 number of parameters: 1 id: 1645 unit: void EditorHFix() file: layer3/Editor.cpp start line: 1052 end line: 1075 size: 23 LOC McCabe index: 6 number of parameters: 3 id: 1646 unit: def paintColorDots() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 23 LOC McCabe index: 6 number of parameters: 3 id: 1647 unit: def mouseMoveEvent() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 23 LOC McCabe index: 10 number of parameters: 2 id: 1648 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 23 LOC McCabe index: 2 number of parameters: 1 id: 1649 unit: def newVolumeFrame() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 23 LOC McCabe index: 4 number of parameters: 1 id: 1650 unit: def update_feedback() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 23 LOC McCabe index: 7 number of parameters: 1 id: 1651 unit: def session_save_as() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 23 LOC McCabe index: 3 number of parameters: 1 id: 1652 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 23 LOC McCabe index: 2 number of parameters: 1 id: 1653 unit: def set_hist() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 23 LOC McCabe index: 5 number of parameters: 2 id: 1654 unit: def _quit() file: modules/pymol/internal.py start line: 0 end line: 0 size: 23 LOC McCabe index: 5 number of parameters: 2 id: 1655 unit: def _processALN() file: modules/pymol/importing.py start line: 0 end line: 0 size: 23 LOC McCabe index: 8 number of parameters: 3 id: 1656 unit: def install_repo_plugins() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 23 LOC McCabe index: 4 number of parameters: 1 id: 1657 unit: def color_by_area() file: modules/pymol/util.py start line: 0 end line: 0 size: 23 LOC McCabe index: 3 number of parameters: 5 id: 1658 unit: def get_prompt() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 23 LOC McCabe index: 9 number of parameters: 1 id: 1659 unit: def anime_old() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 23 LOC McCabe index: 3 number of parameters: 2 id: 1660 unit: def _init_internals() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 23 LOC McCabe index: 14 number of parameters: 1 id: 1661 unit: def finish_launching() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 23 LOC McCabe index: 8 number of parameters: 1 id: 1662 unit: def parseFile() file: modules/pymol/headering.py start line: 0 end line: 0 size: 23 LOC McCabe index: 8 number of parameters: 1 id: 1663 unit: def add_state_sweep() file: modules/pymol/movie.py start line: 0 end line: 0 size: 23 LOC McCabe index: 6 number of parameters: 7 id: 1664 unit: def chain_session() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 23 LOC McCabe index: 10 number of parameters: 1 id: 1665 unit: def setup() file: modules/chempy/tinker/realtime.py start line: 0 end line: 0 size: 23 LOC McCabe index: 3 number of parameters: 2 id: 1666 unit: def __init__() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 23 LOC McCabe index: 8 number of parameters: 1 id: 1667 unit: def update_data_coords() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 23 LOC McCabe index: 7 number of parameters: 1 id: 1668 unit: static int FrontToInteriorSphere() file: layer1/Basis.cpp start line: 321 end line: 346 size: 22 LOC McCabe index: 3 number of parameters: 6 id: 1669 unit: int PAlterAtomState() file: layer1/P.cpp start line: 1316 end line: 1342 size: 22 LOC McCabe index: 2 number of parameters: 9 id: 1670 unit: static void SceneUpdateInvMatrix() file: layer1/Scene.cpp start line: 573 end line: 594 size: 22 LOC McCabe index: 1 number of parameters: 1 id: 1671 unit: void ScenePrepareUnitContext() file: layer1/Scene.cpp start line: 771 end line: 805 size: 22 LOC McCabe index: 3 number of parameters: 3 id: 1672 unit: std::vector SettingGetUpdateList() file: layer1/Setting.cpp start line: 1100 end line: 1128 size: 22 LOC McCabe index: 8 number of parameters: 3 id: 1673 unit: float SettingGet() file: layer1/Setting.cpp start line: 1635 end line: 1656 size: 22 LOC McCabe index: 5 number of parameters: 2 id: 1674 unit: int CharacterGetNew() file: layer1/Character.cpp start line: 493 end line: 525 size: 22 LOC McCabe index: 5 number of parameters: 1 id: 1675 unit: int PConvPyStrToLexRef() file: layer1/PConv.cpp start line: 224 end line: 245 size: 22 LOC McCabe index: 5 number of parameters: 3 id: 1676 unit: int PConvPyObjectToFloat() file: layer1/PConv.cpp start line: 328 end line: 349 size: 22 LOC McCabe index: 6 number of parameters: 2 id: 1677 unit: int PConvPyListToIntArrayInPlace() file: layer1/PConv.cpp start line: 831 end line: 853 size: 22 LOC McCabe index: 6 number of parameters: 3 id: 1678 unit: static void ColladaWriteLibraryMaterials() file: layer1/COLLADA.cpp start line: 375 end line: 403 size: 22 LOC McCabe index: 2 number of parameters: 3 id: 1679 unit: void MovieViewTrim() file: layer1/Movie.cpp start line: 130 end line: 151 size: 22 LOC McCabe index: 5 number of parameters: 2 id: 1680 unit: size_t gl_sizeof() file: layer0/GraphicsUtil.cpp start line: 84 end line: 105 size: 22 LOC McCabe index: 8 number of parameters: 1 id: 1681 unit: void Block::drawLeftEdge() file: layer0/Block.cpp start line: 59 end line: 80 size: 22 LOC McCabe index: 6 number of parameters: 1 id: 1682 unit: static void TetsurfPurge() file: layer0/Tetsurf.cpp start line: 668 end line: 689 size: 22 LOC McCabe index: 6 number of parameters: 1 id: 1683 unit: static void TriangleDeleteEdge() file: layer0/Triangle.cpp start line: 469 end line: 492 size: 22 LOC McCabe index: 6 number of parameters: 3 id: 1684 unit: void MatrixGetRotationC44f() file: layer0/Matrix.cpp start line: 855 end line: 876 size: 22 LOC McCabe index: 1 number of parameters: 5 id: 1685 unit: void SphereRender() file: layer0/Sphere.cpp start line: 668 end line: 689 size: 22 LOC McCabe index: 4 number of parameters: 6 id: 1686 unit: OVreturn_word OVOneToOne_IterateForward() file: ov/src/OVOneToOne.cpp start line: 182 end line: 203 size: 22 LOC McCabe index: 4 number of parameters: 2 id: 1687 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c start line: 190 end line: 213 size: 22 LOC McCabe index: 1 number of parameters: 1 id: 1688 unit: static int fio_open() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 378 end line: 404 size: 22 LOC McCabe index: 6 number of parameters: 3 id: 1689 unit: float situs_voxel_value_interpolate() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 196 end line: 224 size: 22 LOC McCabe index: 1 number of parameters: 7 id: 1690 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 355 end line: 376 size: 22 LOC McCabe index: 1 number of parameters: 1 id: 1691 unit: static int psf_get_angles() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 506 end line: 530 size: 22 LOC McCabe index: 8 number of parameters: 4 id: 1692 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 462 end line: 483 size: 22 LOC McCabe index: 1 number of parameters: 1 id: 1693 unit: static int read_basis_rundata() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 240 end line: 271 size: 22 LOC McCabe index: 5 number of parameters: 2 id: 1694 unit: static void close_basis_read() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 281 end line: 306 size: 22 LOC McCabe index: 4 number of parameters: 1 id: 1695 unit: static float stringToFloat() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 313 end line: 336 size: 22 LOC McCabe index: 5 number of parameters: 1 id: 1696 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1440 end line: 1461 size: 22 LOC McCabe index: 1 number of parameters: 0 id: 1697 unit: static int write_mol2_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 479 end line: 502 size: 22 LOC McCabe index: 4 number of parameters: 8 id: 1698 unit: static int g96_countatoms() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 663 end line: 688 size: 22 LOC McCabe index: 6 number of parameters: 1 id: 1699 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c start line: 282 end line: 303 size: 22 LOC McCabe index: 1 number of parameters: 0 id: 1700 unit: float edm_voxel_value_interpolate() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 292 end line: 320 size: 22 LOC McCabe index: 1 number of parameters: 7 id: 1701 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 481 end line: 502 size: 22 LOC McCabe index: 1 number of parameters: 1 id: 1702 unit: static void xsf_buildrotmat() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 186 end line: 213 size: 22 LOC McCabe index: 3 number of parameters: 3 id: 1703 unit: void AtomInfoBracketResidue() file: layer2/AtomInfo.cpp start line: 1268 end line: 1292 size: 22 LOC McCabe index: 5 number of parameters: 6 id: 1704 unit: int CheckExtrudeContigFlags() file: layer2/RepCartoon.cpp start line: 2055 end line: 2079 size: 22 LOC McCabe index: 5 number of parameters: 8 id: 1705 unit: static short ObjectMeshStateRenderShader() file: layer2/ObjectMesh.cpp start line: 780 end line: 805 size: 22 LOC McCabe index: 4 number of parameters: 5 id: 1706 unit: void DistSet::update() file: layer2/DistSet.cpp start line: 393 end line: 424 size: 22 LOC McCabe index: 5 number of parameters: 1 id: 1707 unit: static void ObjectCGOInvalidate() file: layer2/ObjectCGO.cpp start line: 210 end line: 232 size: 22 LOC McCabe index: 7 number of parameters: 4 id: 1708 unit: static int SurfaceJobEliminateCloseDots() file: layer2/RepSurface.cpp start line: 3206 end line: 3227 size: 22 LOC McCabe index: 6 number of parameters: 2 id: 1709 unit: static void ObjectDistRender() file: layer2/ObjectDist.cpp start line: 442 end line: 469 size: 22 LOC McCabe index: 6 number of parameters: 2 id: 1710 unit: void drawLineToPointInWorldCross() file: layer2/RepLabel.cpp start line: 236 end line: 265 size: 22 LOC McCabe index: 1 number of parameters: 9 id: 1711 unit: short CLIPt() file: layer2/RepLabel.cpp start line: 272 end line: 293 size: 22 LOC McCabe index: 8 number of parameters: 6 id: 1712 unit: static void ObjectSliceStateAssignColors() file: layer2/ObjectSlice.cpp start line: 242 end line: 264 size: 22 LOC McCabe index: 7 number of parameters: 2 id: 1713 unit: static int ObjectSliceAddSlicePoint() file: layer2/ObjectSlice.cpp start line: 806 end line: 831 size: 22 LOC McCabe index: 3 number of parameters: 6 id: 1714 unit: void ObjectSliceRecomputeExtent() file: layer2/ObjectSlice.cpp start line: 1444 end line: 1466 size: 22 LOC McCabe index: 5 number of parameters: 1 id: 1715 unit: static int SculptDoBump() file: layer2/Sculpt.cpp start line: 1558 end line: 1580 size: 22 LOC McCabe index: 3 number of parameters: 7 id: 1716 unit: int ObjectMoleculeAreAtomsBonded2() file: layer2/ObjectMolecule2.cpp start line: 796 end line: 820 size: 22 LOC McCabe index: 6 number of parameters: 4 id: 1717 unit: int ObjectMapStateGetDataRange() file: layer2/ObjectMap.cpp start line: 328 end line: 349 size: 22 LOC McCabe index: 5 number of parameters: 4 id: 1718 unit: static bool isCarboxylateOrPhosphateOxygen() file: layer2/Mol2Typing.cpp start line: 59 end line: 93 size: 22 LOC McCabe index: 10 number of parameters: 2 id: 1719 unit: PyMOLreturn_status PyMOL_CmdShow() file: layer5/PyMOL.cpp start line: 947 end line: 968 size: 22 LOC McCabe index: 3 number of parameters: 4 id: 1720 unit: PyMOLreturn_float PyMOL_CmdDihedral() file: layer5/PyMOL.cpp start line: 1290 end line: 1311 size: 22 LOC McCabe index: 1 number of parameters: 12 id: 1721 unit: PyMOLreturn_status PyMOL_CmdSetFeedbackMask() file: layer5/PyMOL.cpp start line: 1773 end line: 1794 size: 22 LOC McCabe index: 6 number of parameters: 4 id: 1722 unit: static void PopUpFree() file: layer4/PopUp.cpp start line: 368 end line: 392 size: 22 LOC McCabe index: 3 number of parameters: 1 id: 1723 unit: void writeCTabV2000() file: layer3/MoleculeExporter.cpp start line: 834 end line: 864 size: 22 LOC McCabe index: 4 number of parameters: 0 id: 1724 unit: def gestureEvent() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 22 LOC McCabe index: 7 number of parameters: 2 id: 1725 unit: def keyPressEventToPyMOLButtonArgs() file: modules/pmg_qt/keymapping.py start line: 0 end line: 0 size: 22 LOC McCabe index: 2 number of parameters: 1 id: 1726 unit: Array3D Array3D::subarray() file: modules/cealign/src/tnt/tnt_array3d.h start line: 261 end line: 288 size: 22 LOC McCabe index: 12 number of parameters: 6 id: 1727 unit: def toggleClickThrough() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 22 LOC McCabe index: 2 number of parameters: 2 id: 1728 unit: def _cache_get() file: modules/pymol/internal.py start line: 0 end line: 0 size: 22 LOC McCabe index: 6 number of parameters: 3 id: 1729 unit: def __init__() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 22 LOC McCabe index: 1 number of parameters: 2 id: 1730 unit: def blits() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 22 LOC McCabe index: 2 number of parameters: 1 id: 1731 unit: def _get_chi_dihedral_atoms() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 22 LOC McCabe index: 4 number of parameters: 2 id: 1732 unit: def roving() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 22 LOC McCabe index: 2 number of parameters: 2 id: 1733 unit: def _prepare() file: modules/pymol/preset.py start line: 0 end line: 0 size: 22 LOC McCabe index: 4 number of parameters: 3 id: 1734 unit: def get_setting() file: modules/pymol/setting.py start line: 0 end line: 0 size: 22 LOC McCabe index: 7 number of parameters: 4 id: 1735 unit: def flatiter() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 22 LOC McCabe index: 4 number of parameters: 1 id: 1736 unit: def rep_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 22 LOC McCabe index: 1 number of parameters: 3 id: 1737 unit: def map_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 22 LOC McCabe index: 1 number of parameters: 2 id: 1738 unit: def add_state_loop() file: modules/pymol/movie.py start line: 0 end line: 0 size: 22 LOC McCabe index: 6 number of parameters: 7 id: 1739 unit: def get_user_config() file: modules/pymol/invocation.py start line: 0 end line: 0 size: 22 LOC McCabe index: 9 number of parameters: 0 id: 1740 unit: def session_restore_scenes() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 22 LOC McCabe index: 7 number of parameters: 2 id: 1741 unit: def _convert_legacy_scene() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 22 LOC McCabe index: 11 number of parameters: 3 id: 1742 unit: def render_from_string() file: modules/pymol/povray.py start line: 0 end line: 0 size: 22 LOC McCabe index: 4 number of parameters: 6 id: 1743 unit: void SettingUniqueDetachChain() file: layer1/Setting.cpp start line: 138 end line: 161 size: 21 LOC McCabe index: 3 number of parameters: 2 id: 1744 unit: int SettingGet() file: layer1/Setting.cpp start line: 1592 end line: 1612 size: 21 LOC McCabe index: 5 number of parameters: 2 id: 1745 unit: int SceneDeferRay() file: layer1/SceneRay.cpp start line: 762 end line: 782 size: 21 LOC McCabe index: 2 number of parameters: 9 id: 1746 unit: int ColorInit() file: layer1/Color.cpp start line: 2919 end line: 2943 size: 21 LOC McCabe index: 2 number of parameters: 1 id: 1747 unit: void OrthoFree() file: layer1/Ortho.cpp start line: 2611 end line: 2634 size: 21 LOC McCabe index: 2 number of parameters: 1 id: 1748 unit: int SceneMultipick() file: layer1/ScenePicking.cpp start line: 548 end line: 570 size: 21 LOC McCabe index: 6 number of parameters: 2 id: 1749 unit: void UtilNPadVLA() file: layer0/Util.cpp start line: 108 end line: 128 size: 21 LOC McCabe index: 4 number of parameters: 4 id: 1750 unit: void CShaderPrg::Invalidate() file: layer0/ShaderPrg.cpp start line: 333 end line: 353 size: 21 LOC McCabe index: 5 number of parameters: 0 id: 1751 unit: void get_rotation_about3f3fTTTf() file: layer0/Vector.cpp start line: 1540 end line: 1560 size: 21 LOC McCabe index: 1 number of parameters: 4 id: 1752 unit: static void TriangleRectify() file: layer0/Triangle.cpp start line: 558 end line: 580 size: 21 LOC McCabe index: 2 number of parameters: 4 id: 1753 unit: static int read_car_structure_line() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 106 end line: 137 size: 21 LOC McCabe index: 5 number of parameters: 2 id: 1754 unit: static int read_gro_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 148 end line: 169 size: 21 LOC McCabe index: 4 number of parameters: 3 id: 1755 unit: static int read_g96_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 402 end line: 424 size: 21 LOC McCabe index: 4 number of parameters: 3 id: 1756 unit: static int read_biomocca_data() file: contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp start line: 133 end line: 157 size: 21 LOC McCabe index: 5 number of parameters: 4 id: 1757 unit: static int atoifw() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 93 end line: 114 size: 21 LOC McCabe index: 6 number of parameters: 2 id: 1758 unit: static int write_angles() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 1021 end line: 1048 size: 21 LOC McCabe index: 1 number of parameters: 15 id: 1759 unit: static void angular_momentum_expon() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 540 end line: 561 size: 21 LOC McCabe index: 5 number of parameters: 2 id: 1760 unit: static int read_js_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1005 end line: 1029 size: 21 LOC McCabe index: 3 number of parameters: 8 id: 1761 unit: static int read_vaspxdatcar_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c start line: 258 end line: 288 size: 21 LOC McCabe index: 7 number of parameters: 3 id: 1762 unit: void setup_property_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2683 end line: 2709 size: 21 LOC McCabe index: 2 number of parameters: 2 id: 1763 unit: static void write() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1286 end line: 1307 size: 21 LOC McCabe index: 5 number of parameters: 2 id: 1764 unit: static int read_pdbx_structure() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1346 end line: 1369 size: 21 LOC McCabe index: 3 number of parameters: 3 id: 1765 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 392 end line: 412 size: 21 LOC McCabe index: 1 number of parameters: 0 id: 1766 unit: static int DEN_POT_WFK_read_structure() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 662 end line: 693 size: 21 LOC McCabe index: 2 number of parameters: 3 id: 1767 unit: static int mdio_readbox() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 498 end line: 525 size: 21 LOC McCabe index: 5 number of parameters: 4 id: 1768 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 263 end line: 283 size: 21 LOC McCabe index: 1 number of parameters: 0 id: 1769 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1304 end line: 1327 size: 21 LOC McCabe index: 1 number of parameters: 0 id: 1770 unit: static int write_pqr_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 391 end line: 415 size: 21 LOC McCabe index: 4 number of parameters: 2 id: 1771 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 430 end line: 450 size: 21 LOC McCabe index: 1 number of parameters: 0 id: 1772 unit: def get_prefix_path() file: setup.py start line: 0 end line: 0 size: 21 LOC McCabe index: 8 number of parameters: 0 id: 1773 unit: void AtomInfoBracketResidueFast() file: layer2/AtomInfo.cpp start line: 1296 end line: 1322 size: 21 LOC McCabe index: 5 number of parameters: 6 id: 1774 unit: static bool read_atom_site_fract_transf() file: layer2/CifMoleculeReader.cpp start line: 1553 end line: 1578 size: 21 LOC McCabe index: 3 number of parameters: 3 id: 1775 unit: void CoordSetUpdateCoord2IdxMap() file: layer2/CoordSet.cpp start line: 1259 end line: 1279 size: 21 LOC McCabe index: 9 number of parameters: 2 id: 1776 unit: void ObjectMoleculeSetAssemblyCSets() file: layer2/AssemblyHelpers.cpp start line: 47 end line: 75 size: 21 LOC McCabe index: 6 number of parameters: 2 id: 1777 unit: static void SurfaceJobCheckPresentAndWithin() file: layer2/RepSurface.cpp start line: 3522 end line: 3543 size: 21 LOC McCabe index: 7 number of parameters: 6 id: 1778 unit: void RepSurfaceConvertSurfaceJobToPyObject() file: layer2/RepSurface.cpp start line: 3972 end line: 3994 size: 21 LOC McCabe index: 5 number of parameters: 8 id: 1779 unit: void ObjectSliceStateInit() file: layer2/ObjectSlice.cpp start line: 1327 end line: 1352 size: 21 LOC McCabe index: 1 number of parameters: 2 id: 1780 unit: static OVstatus PyMOL_PurgeAPI() file: layer5/PyMOL.cpp start line: 620 end line: 642 size: 21 LOC McCabe index: 1 number of parameters: 1 id: 1781 unit: PyMOLreturn_status PyMOL_CmdHide() file: layer5/PyMOL.cpp start line: 970 end line: 990 size: 21 LOC McCabe index: 3 number of parameters: 4 id: 1782 unit: static void setup_gl_state() file: layer5/PyMOL.cpp start line: 2258 end line: 2287 size: 21 LOC McCabe index: 1 number of parameters: 1 id: 1783 unit: void PyMOL_ExpireIfIdle() file: layer5/PyMOL.cpp start line: 2620 end line: 2641 size: 21 LOC McCabe index: 7 number of parameters: 1 id: 1784 unit: static bool PConvFromPyObject() file: layer3/MovieScene.cpp start line: 794 end line: 819 size: 21 LOC McCabe index: 4 number of parameters: 3 id: 1785 unit: void EditorAutoMeasure() file: layer3/Editor.cpp start line: 1710 end line: 1733 size: 21 LOC McCabe index: 5 number of parameters: 6 id: 1786 unit: int EditorInit() file: layer3/Editor.cpp start line: 2358 end line: 2379 size: 21 LOC McCabe index: 2 number of parameters: 1 id: 1787 unit: int VLAprintf() file: layer3/MoleculeExporter.cpp start line: 66 end line: 94 size: 21 LOC McCabe index: 3 number of parameters: 4 id: 1788 unit: void writeCellSymmetry() file: layer3/MoleculeExporter.cpp start line: 599 end line: 620 size: 21 LOC McCabe index: 4 number of parameters: 0 id: 1789 unit: this._send_cross_script = function() file: modules/web/javascript/pymol.js start line: 104 end line: 129 size: 21 LOC McCabe index: 4 number of parameters: 2 id: 1790 unit: def populateData() file: modules/pmg_qt/advanced_settings_gui.py start line: 0 end line: 0 size: 21 LOC McCabe index: 6 number of parameters: 1 id: 1791 unit: def paintValueBox() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 21 LOC McCabe index: 3 number of parameters: 8 id: 1792 unit: def setHistogram() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 21 LOC McCabe index: 6 number of parameters: 2 id: 1793 unit: void initialize() file: modules/cealign/src/tnt/tnt_matrix.h start line: 71 end line: 96 size: 21 LOC McCabe index: 2 number of parameters: 2 id: 1794 unit: void copy() file: modules/cealign/src/tnt/tnt_matrix.h start line: 98 end line: 122 size: 21 LOC McCabe index: 4 number of parameters: 1 id: 1795 unit: void set() file: modules/cealign/src/tnt/tnt_matrix.h start line: 124 end line: 149 size: 21 LOC McCabe index: 4 number of parameters: 1 id: 1796 unit: Vector solve() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1505 end line: 1536 size: 21 LOC McCabe index: 7 number of parameters: 1 id: 1797 unit: Array1D solve() file: modules/cealign/src/tnt/jama_lu.h start line: 281 end line: 312 size: 21 LOC McCabe index: 7 number of parameters: 1 id: 1798 unit: void copy() file: modules/cealign/src/tnt/tnt_vector.h start line: 85 end line: 109 size: 21 LOC McCabe index: 4 number of parameters: 1 id: 1799 unit: void set() file: modules/cealign/src/tnt/tnt_vector.h start line: 111 end line: 136 size: 21 LOC McCabe index: 4 number of parameters: 1 id: 1800 unit: def popup_script() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 21 LOC McCabe index: 2 number of parameters: 2 id: 1801 unit: def run_file_as_module() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 21 LOC McCabe index: 4 number of parameters: 2 id: 1802 unit: def fetchplugin() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 21 LOC McCabe index: 5 number of parameters: 1 id: 1803 unit: def paste() file: modules/pymol/externing.py start line: 0 end line: 0 size: 21 LOC McCabe index: 10 number of parameters: 1 id: 1804 unit: def get_panel() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 21 LOC McCabe index: 2 number of parameters: 1 id: 1805 unit: def set_mode() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 21 LOC McCabe index: 3 number of parameters: 2 id: 1806 unit: def __init__() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 21 LOC McCabe index: 6 number of parameters: 3 id: 1807 unit: def rep_old() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 21 LOC McCabe index: 2 number of parameters: 2 id: 1808 unit: def ray() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 21 LOC McCabe index: 2 number of parameters: 2 id: 1809 unit: def launch() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 21 LOC McCabe index: 6 number of parameters: 2 id: 1810 unit: def stdin_reader() file: modules/pymol/parser.py start line: 0 end line: 0 size: 21 LOC McCabe index: 9 number of parameters: 1 id: 1811 unit: def rpcCylinder() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 21 LOC McCabe index: 4 number of parameters: 9 id: 1812 unit: def send_doc() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 21 LOC McCabe index: 4 number of parameters: 1 id: 1813 unit: def roll() file: modules/pymol/movie.py start line: 0 end line: 0 size: 21 LOC McCabe index: 5 number of parameters: 5 id: 1814 unit: def create_tmp() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 21 LOC McCabe index: 9 number of parameters: 3 id: 1815 unit: def dump() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 21 LOC McCabe index: 6 number of parameters: 1 id: 1816 unit: def get_grid_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 21 LOC McCabe index: 1 number of parameters: 3 id: 1817 unit: int PComplete() file: layer1/P.cpp start line: 1019 end line: 1038 size: 20 LOC McCabe index: 4 number of parameters: 3 id: 1818 unit: static int SceneDeferredImage() file: layer1/Scene.cpp start line: 5710 end line: 5729 size: 20 LOC McCabe index: 6 number of parameters: 1 id: 1819 unit: void SceneFree() file: layer1/Scene.cpp start line: 5820 end line: 5841 size: 20 LOC McCabe index: 2 number of parameters: 1 id: 1820 unit: static void SceneRotateWithDirty() file: layer1/Scene.cpp start line: 6953 end line: 6978 size: 20 LOC McCabe index: 3 number of parameters: 6 id: 1821 unit: void SceneGetScaledAxes() file: layer1/Scene.cpp start line: 7208 end line: 7231 size: 20 LOC McCabe index: 2 number of parameters: 4 id: 1822 unit: void ScrollBar::update() file: layer1/ScrollBar.cpp start line: 33 end line: 53 size: 20 LOC McCabe index: 5 number of parameters: 0 id: 1823 unit: int ColorGetStatus() file: layer1/Color.cpp start line: 790 end line: 811 size: 20 LOC McCabe index: 7 number of parameters: 2 id: 1824 unit: void ColorUpdateFrontFromSettings() file: layer1/Color.cpp start line: 2956 end line: 2976 size: 20 LOC McCabe index: 5 number of parameters: 1 id: 1825 unit: int PConvPyObjectToInt() file: layer1/PConv.cpp start line: 351 end line: 370 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1826 unit: int PConvPyObjectToChar() file: layer1/PConv.cpp start line: 372 end line: 391 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1827 unit: ov_status PConvPyTupleToIntVLA() file: layer1/PConv.cpp start line: 705 end line: 724 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1828 unit: ov_status PConvPyTupleToFloatVLA() file: layer1/PConv.cpp start line: 726 end line: 745 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1829 unit: int MovieGetSpecLevel() file: layer1/Movie.cpp start line: 223 end line: 242 size: 20 LOC McCabe index: 7 number of parameters: 2 id: 1830 unit: void SceneInitializeViewport() file: layer1/SceneRender.cpp start line: 1488 end line: 1509 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1831 unit: void Block::fill() file: layer0/Block.cpp start line: 36 end line: 55 size: 20 LOC McCabe index: 4 number of parameters: 1 id: 1832 unit: static void TetsurfInterpolate8() file: layer0/Tetsurf.cpp start line: 736 end line: 755 size: 20 LOC McCabe index: 4 number of parameters: 12 id: 1833 unit: static int tex_format_internal_float() file: layer0/GenericBuffer.cpp start line: 102 end line: 121 size: 20 LOC McCabe index: 5 number of parameters: 1 id: 1834 unit: static int tex_format_internal_half_float() file: layer0/GenericBuffer.cpp start line: 123 end line: 142 size: 20 LOC McCabe index: 5 number of parameters: 1 id: 1835 unit: static int tex_format_internal_byte() file: layer0/GenericBuffer.cpp start line: 144 end line: 163 size: 20 LOC McCabe index: 5 number of parameters: 1 id: 1836 unit: void copy33f44d() file: layer0/Vector.cpp start line: 571 end line: 593 size: 20 LOC McCabe index: 1 number of parameters: 2 id: 1837 unit: void copy33f44f() file: layer0/Vector.cpp start line: 595 end line: 617 size: 20 LOC McCabe index: 1 number of parameters: 2 id: 1838 unit: void combineTTT44f44f() file: layer0/Vector.cpp start line: 824 end line: 864 size: 20 LOC McCabe index: 1 number of parameters: 3 id: 1839 unit: double distance_halfline2point3f() file: layer0/Vector.cpp start line: 1764 end line: 1785 size: 20 LOC McCabe index: 3 number of parameters: 4 id: 1840 unit: int MapExclLocus() file: layer0/Map.cpp start line: 714 end line: 734 size: 20 LOC McCabe index: 7 number of parameters: 5 id: 1841 unit: static void AddActive() file: layer0/Triangle.cpp start line: 582 end line: 602 size: 20 LOC McCabe index: 4 number of parameters: 3 id: 1842 unit: __inline__ static int inline_within3fret() file: layer0/Vector.h start line: 501 end line: 520 size: 20 LOC McCabe index: 5 number of parameters: 6 id: 1843 unit: int ListElemPush() file: contrib/champ/list.c start line: 123 end line: 143 size: 20 LOC McCabe index: 2 number of parameters: 2 id: 1844 unit: int ListElemNewZero() file: contrib/champ/list.c start line: 190 end line: 210 size: 20 LOC McCabe index: 2 number of parameters: 1 id: 1845 unit: static void diff() file: contrib/champ/champ.c start line: 111 end line: 130 size: 20 LOC McCabe index: 9 number of parameters: 2 id: 1846 unit: static int write_crd_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c start line: 155 end line: 177 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1847 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 422 end line: 441 size: 20 LOC McCabe index: 1 number of parameters: 1 id: 1848 unit: static int read_psf() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 443 end line: 466 size: 20 LOC McCabe index: 3 number of parameters: 3 id: 1849 unit: static void close_psf_read() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 711 end line: 737 size: 20 LOC McCabe index: 9 number of parameters: 1 id: 1850 unit: static int write_xbgf_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 605 end line: 630 size: 20 LOC McCabe index: 4 number of parameters: 8 id: 1851 unit: static void rebuild_table() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 93 end line: 118 size: 20 LOC McCabe index: 3 number of parameters: 1 id: 1852 unit: static void rebuild_table_int() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 92 end line: 117 size: 20 LOC McCabe index: 3 number of parameters: 1 id: 1853 unit: static int write_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1319 end line: 1343 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1854 unit: static int get_pte_idx_from_string() file: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h start line: 160 end line: 185 size: 20 LOC McCabe index: 9 number of parameters: 1 id: 1855 unit: static xsf_keyword_t lookup_keyword() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 84 end line: 111 size: 20 LOC McCabe index: 8 number of parameters: 1 id: 1856 unit: static int read_map_data() file: contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp start line: 165 end line: 190 size: 20 LOC McCabe index: 3 number of parameters: 4 id: 1857 unit: static void get_pqr_cryst1() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 103 end line: 123 size: 20 LOC McCabe index: 1 number of parameters: 7 id: 1858 unit: static void get_pdb_cryst1() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 113 end line: 133 size: 20 LOC McCabe index: 1 number of parameters: 7 id: 1859 unit: void predict_arraybody() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1219 end line: 1247 size: 20 LOC McCabe index: 3 number of parameters: 2 id: 1860 unit: void write_ct_header() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1333 end line: 1352 size: 20 LOC McCabe index: 4 number of parameters: 4 id: 1861 unit: int AtomInfoGetNewUniqueID() file: layer2/AtomInfo.cpp start line: 125 end line: 144 size: 20 LOC McCabe index: 6 number of parameters: 1 id: 1862 unit: int AtomInfoGetColor() file: layer2/AtomInfo.cpp start line: 1900 end line: 1925 size: 20 LOC McCabe index: 11 number of parameters: 2 id: 1863 unit: bool has_nuc_neighbor() file: layer2/RepCartoon.cpp start line: 373 end line: 396 size: 20 LOC McCabe index: 5 number of parameters: 5 id: 1864 unit: int ObjectCallbackNewFromPyList() file: layer2/ObjectCallback.cpp start line: 274 end line: 299 size: 20 LOC McCabe index: 1 number of parameters: 3 id: 1865 unit: void DistSet::invalidateRep() file: layer2/DistSet.cpp start line: 365 end line: 389 size: 20 LOC McCabe index: 6 number of parameters: 2 id: 1866 unit: int BondCompare() file: layer2/CoordSet.cpp start line: 99 end line: 118 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1867 unit: void CoordSetGetAverage() file: layer2/CoordSet.cpp start line: 760 end line: 779 size: 20 LOC McCabe index: 3 number of parameters: 2 id: 1868 unit: void ObjectAlignmentRecomputeExtent() file: layer2/ObjectAlignment.cpp start line: 889 end line: 908 size: 20 LOC McCabe index: 5 number of parameters: 1 id: 1869 unit: static int RepSurfaceSameColor() file: layer2/RepSurface.cpp start line: 2166 end line: 2187 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 1870 unit: static void sshash_lookup() file: layer2/ObjectMolecule2.cpp start line: 1913 end line: 1934 size: 20 LOC McCabe index: 9 number of parameters: 3 id: 1871 unit: static int ObjectMoleculeCSetFromPyList() file: layer2/ObjectMolecule2.cpp start line: 3535 end line: 3555 size: 20 LOC McCabe index: 7 number of parameters: 2 id: 1872 unit: PyMOLreturn_status PyMOL_CmdSet() file: layer5/PyMOL.cpp start line: 1079 end line: 1099 size: 20 LOC McCabe index: 4 number of parameters: 7 id: 1873 unit: PyMOLreturn_float PyMOL_CmdAngle() file: layer5/PyMOL.cpp start line: 1249 end line: 1268 size: 20 LOC McCabe index: 1 number of parameters: 11 id: 1874 unit: static void init_python() file: layer5/PyMOL.cpp start line: 1856 end line: 1893 size: 20 LOC McCabe index: 2 number of parameters: 2 id: 1875 unit: void PyMOL_AdaptToHardware() file: layer5/PyMOL.cpp start line: 2236 end line: 2256 size: 20 LOC McCabe index: 6 number of parameters: 1 id: 1876 unit: static int EditorGetEffectiveState() file: layer3/Editor.cpp start line: 301 end line: 321 size: 20 LOC McCabe index: 11 number of parameters: 3 id: 1877 unit: int EditorIsAnActiveObject() file: layer3/Editor.cpp start line: 853 end line: 872 size: 20 LOC McCabe index: 7 number of parameters: 2 id: 1878 unit: void EditorCycleValence() file: layer3/Editor.cpp start line: 876 end line: 896 size: 20 LOC McCabe index: 6 number of parameters: 2 id: 1879 unit: def file_run() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 20 LOC McCabe index: 4 number of parameters: 1 id: 1880 unit: def __init__() file: modules/pmg_qt/advanced_settings_gui.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 3 id: 1881 unit: def addmenuitem() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 20 LOC McCabe index: 8 number of parameters: 6 id: 1882 unit: def _file_save_object() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 20 LOC McCabe index: 3 number of parameters: 4 id: 1883 unit: inline Matrix transpose_mult() file: modules/cealign/src/tnt/tnt_matrix.h start line: 724 end line: 749 size: 20 LOC McCabe index: 4 number of parameters: 2 id: 1884 unit: Array1D Cholesky::solve() file: modules/cealign/src/tnt/jama_cholesky.h start line: 146 end line: 174 size: 20 LOC McCabe index: 6 number of parameters: 1 id: 1885 unit: Vector Cholesky::solve() file: modules/cealign/src/tnt/tnt_linalg.h start line: 149 end line: 177 size: 20 LOC McCabe index: 6 number of parameters: 1 id: 1886 unit: inline Fortran_Array1D Fortran_Array1D::subarray() file: modules/cealign/src/tnt/tnt_fortran_array1d.h start line: 219 end line: 239 size: 20 LOC McCabe index: 4 number of parameters: 2 id: 1887 unit: def __init__() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 20 LOC McCabe index: 3 number of parameters: 2 id: 1888 unit: def __init__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 5 id: 1889 unit: def clamp_xy_allowed() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 20 LOC McCabe index: 11 number of parameters: 3 id: 1890 unit: def get_context_info() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 20 LOC McCabe index: 8 number of parameters: 0 id: 1891 unit: def load_raw() file: modules/pymol/importing.py start line: 0 end line: 0 size: 20 LOC McCabe index: 5 number of parameters: 10 id: 1892 unit: def pref_save() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 20 LOC McCabe index: 3 number of parameters: 2 id: 1893 unit: def __init__() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 20 LOC McCabe index: 3 number of parameters: 2 id: 1894 unit: def list_scan() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 20 LOC McCabe index: 8 number of parameters: 1 id: 1895 unit: def run_gl() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 1 id: 1896 unit: def get_panel() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 1 id: 1897 unit: def get_prompt() file: modules/pymol/wizard/security.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 1 id: 1898 unit: def get_panel() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 20 LOC McCabe index: 3 number of parameters: 1 id: 1899 unit: def migrate_session() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 20 LOC McCabe index: 7 number of parameters: 2 id: 1900 unit: def get_panel() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 20 LOC McCabe index: 3 number of parameters: 1 id: 1901 unit: def do_key() file: modules/pymol/wizard/renaming.py start line: 0 end line: 0 size: 20 LOC McCabe index: 9 number of parameters: 5 id: 1902 unit: def rep_old() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 20 LOC McCabe index: 2 number of parameters: 2 id: 1903 unit: def mouse_config() file: modules/pymol/menu.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 1 id: 1904 unit: def presets() file: modules/pymol/menu.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 2 id: 1905 unit: def compute() file: modules/pymol/menu.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 2 id: 1906 unit: def slice_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 2 id: 1907 unit: def all_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 2 id: 1908 unit: def sg_sym_to_mat_list() file: modules/pymol/xray.py start line: 0 end line: 0 size: 20 LOC McCabe index: 5 number of parameters: 1 id: 1909 unit: def callback() file: modules/pymol/lazyio.py start line: 0 end line: 0 size: 20 LOC McCabe index: 1 number of parameters: 18 id: 1910 unit: def clean() file: modules/pymol/computing.py start line: 0 end line: 0 size: 20 LOC McCabe index: 4 number of parameters: 11 id: 1911 unit: def do() file: modules/chempy/bmin/__init__.py start line: 0 end line: 0 size: 20 LOC McCabe index: 9 number of parameters: 1 id: 1912 unit: def parse_top() file: modules/chempy/mae.py start line: 0 end line: 0 size: 20 LOC McCabe index: 7 number of parameters: 1 id: 1913 unit: def _read_m_bond() file: modules/chempy/mae.py start line: 0 end line: 0 size: 20 LOC McCabe index: 7 number of parameters: 3 id: 1914 unit: def missing_c_termini() file: modules/chempy/champ/assign.py start line: 0 end line: 0 size: 20 LOC McCabe index: 7 number of parameters: 1 id: 1915 unit: void drawLineAsGeometryWithOffsets() file: data/shaders/connector.gs start line: 229 end line: 251 size: 20 LOC McCabe index: 1 number of parameters: 4 id: 1916 unit: void PSleep() file: layer1/P.cpp start line: 1264 end line: 1285 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1917 unit: void PExit() file: layer1/P.cpp start line: 2356 end line: 2383 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 1918 unit: void SceneGetView() file: layer1/Scene.cpp start line: 908 end line: 927 size: 19 LOC McCabe index: 3 number of parameters: 2 id: 1919 unit: static void deinterlace() file: layer1/Scene.cpp start line: 1883 end line: 1902 size: 19 LOC McCabe index: 5 number of parameters: 5 id: 1920 unit: int SceneValidateImageMode() file: layer1/Scene.cpp start line: 2162 end line: 2184 size: 19 LOC McCabe index: 9 number of parameters: 3 id: 1921 unit: int SceneDeferImage() file: layer1/Scene.cpp start line: 5731 end line: 5749 size: 19 LOC McCabe index: 3 number of parameters: 8 id: 1922 unit: void SceneSetDefaultView() file: layer1/Scene.cpp start line: 5854 end line: 5879 size: 19 LOC McCabe index: 1 number of parameters: 1 id: 1923 unit: float SceneGetReflectScaleValue() file: layer1/Scene.cpp start line: 6615 end line: 6633 size: 19 LOC McCabe index: 4 number of parameters: 2 id: 1924 unit: template void copy_op_from() file: layer1/CGO.h start line: 755 end line: 777 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 1925 unit: static void RayAntiSpawn() file: layer1/Ray.cpp start line: 2930 end line: 2950 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 1926 unit: static void RayTraceSpawn() file: layer1/Ray.cpp start line: 2973 end line: 2994 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 1927 unit: void RayGetScaledAxes() file: layer1/Ray.cpp start line: 6728 end line: 6751 size: 19 LOC McCabe index: 2 number of parameters: 3 id: 1928 unit: int ButModeCheckPossibleSingleClick() file: layer1/ButMode.cpp start line: 583 end line: 601 size: 19 LOC McCabe index: 5 number of parameters: 3 id: 1929 unit: int ObjectGetSpecLevel() file: layer1/PyMOLObject.cpp start line: 204 end line: 222 size: 19 LOC McCabe index: 7 number of parameters: 2 id: 1930 unit: void ObjectResetTTT() file: layer1/PyMOLObject.cpp start line: 941 end line: 960 size: 19 LOC McCabe index: 7 number of parameters: 2 id: 1931 unit: void ObjectSetRepVisMask() file: layer1/PyMOLObject.cpp start line: 1123 end line: 1141 size: 19 LOC McCabe index: 5 number of parameters: 3 id: 1932 unit: static int MovieCmdFromPyList() file: layer1/Movie.cpp start line: 470 end line: 492 size: 19 LOC McCabe index: 7 number of parameters: 3 id: 1933 unit: void MovieClearImages() file: layer1/Movie.cpp start line: 1503 end line: 1522 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 1934 unit: void MoviePrepareDrag() file: layer1/Movie.cpp start line: 1560 end line: 1578 size: 19 LOC McCabe index: 3 number of parameters: 7 id: 1935 unit: int CrystalFromPyList() file: layer0/Crystal.cpp start line: 44 end line: 66 size: 19 LOC McCabe index: 9 number of parameters: 2 id: 1936 unit: static void TetsurfInterpolate4() file: layer0/Tetsurf.cpp start line: 711 end line: 729 size: 19 LOC McCabe index: 4 number of parameters: 8 id: 1937 unit: void CShaderMgr::MakeDerivatives() file: layer0/ShaderMgr.cpp start line: 1631 end line: 1657 size: 19 LOC McCabe index: 5 number of parameters: 2 id: 1938 unit: void CShaderMgr::ShaderSourceInvalidate() file: layer0/ShaderMgr.cpp start line: 1678 end line: 1701 size: 19 LOC McCabe index: 6 number of parameters: 2 id: 1939 unit: void frameBuffer_t::checkStatus() file: layer0/GenericBuffer.cpp start line: 330 end line: 348 size: 19 LOC McCabe index: 5 number of parameters: 0 id: 1940 unit: void copy44f() file: layer0/Vector.cpp start line: 443 end line: 464 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1941 unit: void copy44d() file: layer0/Vector.cpp start line: 466 end line: 487 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1942 unit: void copy44f44d() file: layer0/Vector.cpp start line: 525 end line: 546 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1943 unit: void copy44d44f() file: layer0/Vector.cpp start line: 548 end line: 569 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1944 unit: void transpose44f44f() file: layer0/Vector.cpp start line: 655 end line: 676 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1945 unit: void transpose44d44d() file: layer0/Vector.cpp start line: 678 end line: 699 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1946 unit: void convert44d44f() file: layer0/Vector.cpp start line: 936 end line: 954 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1947 unit: void convert44f44d() file: layer0/Vector.cpp start line: 956 end line: 974 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1948 unit: void invert_special44d44d() file: layer0/Vector.cpp start line: 1243 end line: 1268 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1949 unit: void invert_special44f44f() file: layer0/Vector.cpp start line: 1270 end line: 1295 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1950 unit: void invert_rotation_only44d44d() file: layer0/Vector.cpp start line: 1447 end line: 1470 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 1951 unit: float get_angle3f() file: layer0/Vector.cpp start line: 1648 end line: 1668 size: 19 LOC McCabe index: 4 number of parameters: 2 id: 1952 unit: bool evaluate() file: layer0/GenericBuffer.h start line: 293 end line: 311 size: 19 LOC McCabe index: 5 number of parameters: 0 id: 1953 unit: int TriangleDegenerate() file: layer0/Triangle.cpp start line: 75 end line: 94 size: 19 LOC McCabe index: 6 number of parameters: 6 id: 1954 unit: void _OVHeapArray_Free() file: ov/src/OVHeapArray.cpp start line: 88 end line: 106 size: 19 LOC McCabe index: 2 number of parameters: 3 id: 1955 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c start line: 228 end line: 246 size: 19 LOC McCabe index: 1 number of parameters: 0 id: 1956 unit: void weight_props_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 3051 end line: 3074 size: 19 LOC McCabe index: 3 number of parameters: 3 id: 1957 unit: static inline int getUniqueResID() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 442 end line: 466 size: 19 LOC McCabe index: 4 number of parameters: 2 id: 1958 unit: static void writeAtomSite() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1244 end line: 1263 size: 19 LOC McCabe index: 2 number of parameters: 1 id: 1959 unit: static int read_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1371 end line: 1390 size: 19 LOC McCabe index: 2 number of parameters: 8 id: 1960 unit: static void print_dcderror() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 124 end line: 143 size: 19 LOC McCabe index: 11 number of parameters: 2 id: 1961 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1153 end line: 1171 size: 19 LOC McCabe index: 1 number of parameters: 0 id: 1962 unit: ssize_t StkReader::times() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1193 end line: 1214 size: 19 LOC McCabe index: 7 number of parameters: 3 id: 1963 unit: static int write_bgf_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 579 end line: 601 size: 19 LOC McCabe index: 4 number of parameters: 8 id: 1964 unit: static int strip_white() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 447 end line: 472 size: 19 LOC McCabe index: 13 number of parameters: 1 id: 1965 unit: static float get_pte_vdw_radius() file: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h start line: 109 end line: 131 size: 19 LOC McCabe index: 10 number of parameters: 1 id: 1966 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 234 end line: 252 size: 19 LOC McCabe index: 1 number of parameters: 0 id: 1967 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 909 end line: 927 size: 19 LOC McCabe index: 1 number of parameters: 1 id: 1968 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 580 end line: 598 size: 19 LOC McCabe index: 1 number of parameters: 1 id: 1969 unit: void get_box() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 738 end line: 766 size: 19 LOC McCabe index: 10 number of parameters: 1 id: 1970 unit: virtual void set_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 829 end line: 847 size: 19 LOC McCabe index: 16 number of parameters: 1 id: 1971 unit: int read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1832 end line: 1852 size: 19 LOC McCabe index: 4 number of parameters: 3 id: 1972 unit: static void RepSphereRenderPick() file: layer2/RepSphere.cpp start line: 117 end line: 137 size: 19 LOC McCabe index: 4 number of parameters: 3 id: 1973 unit: int CartoonExtrudePutty() file: layer2/RepCartoon.cpp start line: 2277 end line: 2295 size: 19 LOC McCabe index: 4 number of parameters: 9 id: 1974 unit: static void ObjectMoleculeConnectDiscrete() file: layer2/CifMoleculeReader.cpp start line: 236 end line: 259 size: 19 LOC McCabe index: 5 number of parameters: 1 id: 1975 unit: static bool get_assembly_chains() file: layer2/CifMoleculeReader.cpp start line: 607 end line: 630 size: 19 LOC McCabe index: 6 number of parameters: 4 id: 1976 unit: static int ObjectAlignmentAllStatesFromPyList() file: layer2/ObjectAlignment.cpp start line: 807 end line: 825 size: 19 LOC McCabe index: 5 number of parameters: 3 id: 1977 unit: static int ObjectGadgetGSetFromPyList() file: layer2/ObjectGadget.cpp start line: 274 end line: 293 size: 19 LOC McCabe index: 7 number of parameters: 3 id: 1978 unit: int ObjectDistMoveLabel() file: layer2/ObjectDist.cpp start line: 68 end line: 91 size: 19 LOC McCabe index: 6 number of parameters: 6 id: 1979 unit: int ObjectSliceGetVertex() file: layer2/ObjectSlice.cpp start line: 782 end line: 803 size: 19 LOC McCabe index: 8 number of parameters: 4 id: 1980 unit: static float ShakerDoDistLimit() file: layer2/Sculpt.cpp start line: 199 end line: 218 size: 19 LOC McCabe index: 2 number of parameters: 6 id: 1981 unit: static float ShakerDoDistMinim() file: layer2/Sculpt.cpp start line: 223 end line: 243 size: 19 LOC McCabe index: 2 number of parameters: 6 id: 1982 unit: static int SculptCheckBump() file: layer2/Sculpt.cpp start line: 1423 end line: 1441 size: 19 LOC McCabe index: 5 number of parameters: 5 id: 1983 unit: static int append_index() file: layer2/ObjectMolecule2.cpp start line: 206 end line: 224 size: 19 LOC McCabe index: 4 number of parameters: 6 id: 1984 unit: int ObjectMapHalve() file: layer2/ObjectMap.cpp start line: 1030 end line: 1050 size: 19 LOC McCabe index: 8 number of parameters: 3 id: 1985 unit: PyMOLreturn_value PyMOL_CmdGet() file: layer5/PyMOL.cpp start line: 1101 end line: 1121 size: 19 LOC McCabe index: 4 number of parameters: 5 id: 1986 unit: PyMOLreturn_float PyMOL_CmdDistance() file: layer5/PyMOL.cpp start line: 1211 end line: 1229 size: 19 LOC McCabe index: 1 number of parameters: 11 id: 1987 unit: PyMOLreturn_float PyMOL_CmdGetDihedral() file: layer5/PyMOL.cpp start line: 1270 end line: 1288 size: 19 LOC McCabe index: 1 number of parameters: 7 id: 1988 unit: PyMOLreturn_status PyMOL_CmdTurn() file: layer5/PyMOL.cpp start line: 1746 end line: 1764 size: 19 LOC McCabe index: 4 number of parameters: 3 id: 1989 unit: static void PyMOL_LaunchStatus_Feedback() file: layer5/PyMOL.cpp start line: 2296 end line: 2316 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 1990 unit: std::string MaeExportGetSubGroupId() file: layer3/MaeExportHelpers.cpp start line: 176 end line: 199 size: 19 LOC McCabe index: 6 number of parameters: 2 id: 1991 unit: static int SeekerFindColor() file: layer3/Seeker.cpp start line: 964 end line: 982 size: 19 LOC McCabe index: 6 number of parameters: 3 id: 1992 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 970 end line: 994 size: 19 LOC McCabe index: 7 number of parameters: 0 id: 1993 unit: JSON.stringify = function() file: modules/web/javascript/json2.js start line: 350 end line: 390 size: 19 LOC McCabe index: 8 number of parameters: 3 id: 1994 unit: def toggle_fullscreen() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 19 LOC McCabe index: 5 number of parameters: 2 id: 1995 unit: def wheelEvent() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 19 LOC McCabe index: 6 number of parameters: 2 id: 1996 unit: def addPoint() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 19 LOC McCabe index: 4 number of parameters: 3 id: 1997 unit: def displayScript() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 19 LOC McCabe index: 2 number of parameters: 1 id: 1998 unit: def activeSeleValid() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 19 LOC McCabe index: 8 number of parameters: 1 id: 1999 unit: def activateRepeatOrDismiss() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 19 LOC McCabe index: 8 number of parameters: 1 id: 2000 unit: void i_refvec::destroy() file: modules/cealign/src/tnt/tnt_i_refvec.h start line: 170 end line: 189 size: 19 LOC McCabe index: 3 number of parameters: 0 id: 2001 unit: def edit_pymolrc() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 19 LOC McCabe index: 3 number of parameters: 1 id: 2002 unit: def file_run() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 19 LOC McCabe index: 3 number of parameters: 1 id: 2003 unit: def activeSeleValid() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 19 LOC McCabe index: 8 number of parameters: 1 id: 2004 unit: def activateRepeatOrDismiss() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 19 LOC McCabe index: 8 number of parameters: 1 id: 2005 unit: def legacyinit() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 2006 unit: def populate_preferences() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 2007 unit: def find_surface_residues() file: modules/pymol/util.py start line: 0 end line: 0 size: 19 LOC McCabe index: 4 number of parameters: 3 id: 2008 unit: def auto_configure() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 19 LOC McCabe index: 7 number of parameters: 0 id: 2009 unit: def do_select() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 19 LOC McCabe index: 4 number of parameters: 2 id: 2010 unit: def launch() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 19 LOC McCabe index: 5 number of parameters: 3 id: 2011 unit: def get_panel() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 19 LOC McCabe index: 3 number of parameters: 1 id: 2012 unit: def format_cols() file: modules/pymol/headering.py start line: 0 end line: 0 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 2013 unit: def ball_and_stick() file: modules/pymol/preset.py start line: 0 end line: 0 size: 19 LOC McCabe index: 3 number of parameters: 1 id: 2014 unit: def molauto() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 19 LOC McCabe index: 4 number of parameters: 2 id: 2015 unit: def all_option() file: modules/pymol/menu.py start line: 0 end line: 0 size: 19 LOC McCabe index: 1 number of parameters: 2 id: 2016 unit: def send_exception_json() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 19 LOC McCabe index: 3 number of parameters: 3 id: 2017 unit: def guess_mime() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 19 LOC McCabe index: 9 number of parameters: 2 id: 2018 unit: def scene_recall_message() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 19 LOC McCabe index: 8 number of parameters: 2 id: 2019 unit: def get_data_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 19 LOC McCabe index: 3 number of parameters: 3 id: 2020 unit: void ExtrudeBuildNormals1f() file: layer1/Extrude.cpp start line: 487 end line: 508 size: 18 LOC McCabe index: 3 number of parameters: 1 id: 2021 unit: void SceneRelocate() file: layer1/Scene.cpp start line: 2407 end line: 2436 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2022 unit: float SceneGetDynamicLineWidth() file: layer1/Scene.cpp start line: 7039 end line: 7056 size: 18 LOC McCabe index: 6 number of parameters: 2 id: 2023 unit: int SettingFromPyList() file: layer1/Setting.cpp start line: 1070 end line: 1088 size: 18 LOC McCabe index: 6 number of parameters: 2 id: 2024 unit: int CharacterInit() file: layer1/Character.cpp start line: 401 end line: 418 size: 18 LOC McCabe index: 3 number of parameters: 1 id: 2025 unit: static void unique_color_add() file: layer1/Ray.cpp start line: 1787 end line: 1806 size: 18 LOC McCabe index: 3 number of parameters: 7 id: 2026 unit: int CRay::triangleTrans3fv() file: layer1/Ray.cpp start line: 7490 end line: 7508 size: 18 LOC McCabe index: 2 number of parameters: 12 id: 2027 unit: static int SceneDeferredRay() file: layer1/SceneRay.cpp start line: 743 end line: 760 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 2028 unit: static void GenerateCharFngrprnt() file: layer1/FontType.cpp start line: 53 end line: 70 size: 18 LOC McCabe index: 5 number of parameters: 8 id: 2029 unit: void ObjectSetTTTOrigin() file: layer1/PyMOLObject.cpp start line: 1069 end line: 1097 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2030 unit: int ObjectStateFromPyList() file: layer1/PyMOLObject.cpp start line: 1485 end line: 1506 size: 18 LOC McCabe index: 7 number of parameters: 3 id: 2031 unit: void MovieAppendCommand() file: layer1/Movie.cpp start line: 1450 end line: 1467 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2032 unit: GLboolean ProgramStringIsNative() file: layer0/ShaderPrg.cpp start line: 56 end line: 73 size: 18 LOC McCabe index: 5 number of parameters: 4 id: 2033 unit: void recondition33d() file: layer0/Vector.cpp start line: 1409 end line: 1426 size: 18 LOC McCabe index: 1 number of parameters: 1 id: 2034 unit: void recondition44d() file: layer0/Vector.cpp start line: 1428 end line: 1445 size: 18 LOC McCabe index: 1 number of parameters: 1 id: 2035 unit: int ListLen() file: contrib/champ/list.c start line: 93 end line: 111 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 2036 unit: int ListElemPurgeInt() file: contrib/champ/list.c start line: 166 end line: 183 size: 18 LOC McCabe index: 4 number of parameters: 3 id: 2037 unit: static int PConvPyObjectToInt() file: contrib/champ/champ.c start line: 1196 end line: 1213 size: 18 LOC McCabe index: 4 number of parameters: 2 id: 2038 unit: int ChampParseNumeral() file: contrib/champ/champ.c start line: 2848 end line: 2865 size: 18 LOC McCabe index: 11 number of parameters: 1 id: 2039 unit: int ChampAddBondToAtom() file: contrib/champ/champ.c start line: 4723 end line: 4740 size: 18 LOC McCabe index: 3 number of parameters: 3 id: 2040 unit: static int read_situs_data() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 132 end line: 153 size: 18 LOC McCabe index: 3 number of parameters: 4 id: 2041 unit: static int parse_parm7_atoms() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 192 end line: 211 size: 18 LOC McCabe index: 4 number of parameters: 4 id: 2042 unit: static void close_parm7_file() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 341 end line: 358 size: 18 LOC McCabe index: 7 number of parameters: 2 id: 2043 unit: static int skip_dcdstep() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 676 end line: 703 size: 18 LOC McCabe index: 7 number of parameters: 4 id: 2044 unit: static int get_pte_idx() file: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h start line: 133 end line: 158 size: 18 LOC McCabe index: 6 number of parameters: 1 id: 2045 unit: static void strip_whitespace() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 54 end line: 79 size: 18 LOC McCabe index: 6 number of parameters: 2 id: 2046 unit: static int read_cor_structure() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 272 end line: 293 size: 18 LOC McCabe index: 3 number of parameters: 3 id: 2047 unit: void ReadPARM::close_parm_file() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 213 end line: 230 size: 18 LOC McCabe index: 7 number of parameters: 1 id: 2048 unit: int ReadPARM::preadln() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 258 end line: 279 size: 18 LOC McCabe index: 6 number of parameters: 2 id: 2049 unit: static int write_pqr_structure() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 363 end line: 384 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2050 unit: Schema predict_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1161 end line: 1179 size: 18 LOC McCabe index: 6 number of parameters: 1 id: 2051 unit: void write_ct_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1450 end line: 1469 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 2052 unit: int AtomInfoNameOrder() file: layer2/AtomInfo.cpp start line: 2095 end line: 2112 size: 18 LOC McCabe index: 7 number of parameters: 3 id: 2053 unit: int RepCartoonSameVis() file: layer2/RepCartoon.cpp start line: 2742 end line: 2761 size: 18 LOC McCabe index: 4 number of parameters: 2 id: 2054 unit: static void ObjectCallbackFree() file: layer2/ObjectCallback.cpp start line: 38 end line: 55 size: 18 LOC McCabe index: 3 number of parameters: 1 id: 2055 unit: int ObjectMeshInvalidateMapName() file: layer2/ObjectMesh.cpp start line: 321 end line: 338 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2056 unit: int ObjectMeshGetLevel() file: layer2/ObjectMesh.cpp start line: 398 end line: 415 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2057 unit: int ObjectMeshSetLevel() file: layer2/ObjectMesh.cpp start line: 417 end line: 434 size: 18 LOC McCabe index: 4 number of parameters: 4 id: 2058 unit: static void ObjectVolumeStateFree() file: layer2/ObjectVolume.cpp start line: 301 end line: 320 size: 18 LOC McCabe index: 5 number of parameters: 1 id: 2059 unit: int ObjectVolumeInvalidateMapName() file: layer2/ObjectVolume.cpp start line: 334 end line: 351 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2060 unit: int CoordSetValidateRefPos() file: layer2/CoordSet.cpp start line: 78 end line: 95 size: 18 LOC McCabe index: 5 number of parameters: 1 id: 2061 unit: int ObjectSurfaceInvalidateMapName() file: layer2/ObjectSurface.cpp start line: 334 end line: 351 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2062 unit: static void ObjectSurfaceRenderCell() file: layer2/ObjectSurface.cpp start line: 927 end line: 944 size: 18 LOC McCabe index: 3 number of parameters: 5 id: 2063 unit: int ObjectSurfaceGetLevel() file: layer2/ObjectSurface.cpp start line: 1208 end line: 1225 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2064 unit: static int ObjectCGOAllStatesFromPyList() file: layer2/ObjectCGO.cpp start line: 95 end line: 113 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2065 unit: void immediate_draw_indexed_vertices_alpha() file: layer2/RepSurface.cpp start line: 187 end line: 204 size: 18 LOC McCabe index: 5 number of parameters: 7 id: 2066 unit: bool MOLV3000ReadLine() file: layer2/MolV3000.cpp start line: 34 end line: 62 size: 18 LOC McCabe index: 9 number of parameters: 2 id: 2067 unit: int RepMeshSameVis() file: layer2/RepMesh.cpp start line: 545 end line: 564 size: 18 LOC McCabe index: 4 number of parameters: 2 id: 2068 unit: int ObjectMapDouble() file: layer2/ObjectMap.cpp start line: 1011 end line: 1028 size: 18 LOC McCabe index: 8 number of parameters: 2 id: 2069 unit: void ObjectMapStatePurge() file: layer2/ObjectMap.cpp start line: 1773 end line: 1792 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 2070 unit: void PyMOL_Free() file: layer5/PyMOL.cpp start line: 2190 end line: 2210 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 2071 unit: void MainRefreshNow() file: layer5/main.cpp start line: 1111 end line: 1129 size: 18 LOC McCabe index: 5 number of parameters: 1 id: 2072 unit: void MenuActivate3fv() file: layer4/Menu.cpp start line: 49 end line: 68 size: 18 LOC McCabe index: 3 number of parameters: 8 id: 2073 unit: static void MovieSceneRecallFrame() file: layer3/MovieScene.cpp start line: 326 end line: 346 size: 18 LOC McCabe index: 6 number of parameters: 2 id: 2074 unit: static bool MovieSceneOrderBeforeAfter() file: layer3/MovieScene.cpp start line: 622 end line: 643 size: 18 LOC McCabe index: 3 number of parameters: 3 id: 2075 unit: def scramble() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 2 id: 2076 unit: Array2D matmult() file: modules/cealign/src/tnt/tnt_array2d_utils.h start line: 259 end line: 283 size: 18 LOC McCabe index: 5 number of parameters: 2 id: 2077 unit: inline Vector mult() file: modules/cealign/src/tnt/tnt_matrix.h start line: 595 end line: 618 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 2078 unit: Vector diag() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 180 end line: 198 size: 18 LOC McCabe index: 5 number of parameters: 0 id: 2079 unit: Array2D Array2D::subarray() file: modules/cealign/src/tnt/tnt_array2d.h start line: 399 end line: 422 size: 18 LOC McCabe index: 4 number of parameters: 4 id: 2080 unit: def __init__() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 4 id: 2081 unit: def encode() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 2082 unit: def scramble() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 2 id: 2083 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 2 id: 2084 unit: def __init__() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 4 id: 2085 unit: def plot_ramp() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 18 LOC McCabe index: 5 number of parameters: 1 id: 2086 unit: def _png() file: modules/pymol/internal.py start line: 0 end line: 0 size: 18 LOC McCabe index: 6 number of parameters: 9 id: 2087 unit: def cmp_version() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 2 id: 2088 unit: def addmenuitem() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 18 LOC McCabe index: 6 number of parameters: 3 id: 2089 unit: def confirm_network_access() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 0 id: 2090 unit: def cartoon() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 1 id: 2091 unit: def get_panel() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 1 id: 2092 unit: def cartoon() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2093 unit: def elec() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2094 unit: def trans() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2095 unit: def cartoon() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2096 unit: def elec() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2097 unit: def trans() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 2098 unit: def fit() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 18 LOC McCabe index: 5 number of parameters: 1 id: 2099 unit: def do_pick() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 2100 unit: def do_select() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 2101 unit: def launch_gui() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 2102 unit: def technical() file: modules/pymol/preset.py start line: 0 end line: 0 size: 18 LOC McCabe index: 2 number of parameters: 1 id: 2103 unit: def store_with_state() file: modules/pymol/menu.py start line: 0 end line: 0 size: 18 LOC McCabe index: 5 number of parameters: 3 id: 2104 unit: def obj_motion() file: modules/pymol/menu.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 3 id: 2105 unit: def mol_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 2 id: 2106 unit: def mol_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 2 id: 2107 unit: def level() file: modules/pymol/menu.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 2 id: 2108 unit: def _nutate() file: modules/pymol/movie.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 6 id: 2109 unit: def add_one() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 18 LOC McCabe index: 10 number of parameters: 2 id: 2110 unit: def editing_ring() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 18 LOC McCabe index: 9 number of parameters: 3 id: 2111 unit: def find_known_secondary() file: modules/chempy/place.py start line: 0 end line: 0 size: 18 LOC McCabe index: 8 number of parameters: 3 id: 2112 unit: def test_random() file: modules/chempy/place.py start line: 0 end line: 0 size: 18 LOC McCabe index: 4 number of parameters: 0 id: 2113 unit: def get_neighbors() file: modules/chempy/neighbor.py start line: 0 end line: 0 size: 18 LOC McCabe index: 7 number of parameters: 2 id: 2114 unit: def insert_atom() file: modules/chempy/models.py start line: 0 end line: 0 size: 18 LOC McCabe index: 10 number of parameters: 3 id: 2115 unit: def from_c_object() file: modules/chempy/map.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 8 id: 2116 unit: def read_density_list() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 18 LOC McCabe index: 7 number of parameters: 4 id: 2117 unit: def setup_from_min_max() file: modules/chempy/brick.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 5 id: 2118 unit: def preset_default() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 0 id: 2119 unit: def preset_xray() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 18 LOC McCabe index: 1 number of parameters: 0 id: 2120 unit: static float ZLineClipPoint() file: layer1/Basis.cpp start line: 1114 end line: 1144 size: 17 LOC McCabe index: 4 number of parameters: 4 id: 2121 unit: void BasisSetupMatrix() file: layer1/Basis.cpp start line: 1359 end line: 1398 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2122 unit: bool TextSetColorFromCode() file: layer1/Text.cpp start line: 797 end line: 815 size: 17 LOC McCabe index: 3 number of parameters: 3 id: 2123 unit: void PSleepWhileBusy() file: layer1/P.cpp start line: 1224 end line: 1242 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2124 unit: void PSleepUnlocked() file: layer1/P.cpp start line: 1244 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unique_vector_add() file: layer1/Ray.cpp start line: 1768 end line: 1785 size: 17 LOC McCabe index: 3 number of parameters: 6 id: 2132 unit: static void RayTransformInverseNormals33() file: layer1/Ray.cpp start line: 7776 end line: 7792 size: 17 LOC McCabe index: 3 number of parameters: 4 id: 2133 unit: int CSeq::drag() file: layer1/Seq.cpp start line: 180 end line: 196 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 2134 unit: static void SeqPurgeRowVLA() file: layer1/Seq.cpp start line: 752 end line: 768 size: 17 LOC McCabe index: 3 number of parameters: 1 id: 2135 unit: static void CheckUnicode() file: layer1/FontType.cpp start line: 35 end line: 51 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 2136 unit: static int add_normal_char() file: layer1/Ortho.cpp start line: 829 end line: 845 size: 17 LOC McCabe index: 2 number of parameters: 2 id: 2137 unit: static void ColladaWriteMeshGeometry() file: layer1/COLLADA.cpp start line: 644 end line: 662 size: 17 LOC McCabe index: 1 number of parameters: 11 id: 2138 unit: int ObjectStateSetMatrix() file: layer1/PyMOLObject.cpp start line: 1313 end line: 1329 size: 17 LOC McCabe index: 5 number of parameters: 2 id: 2139 unit: void MovieSetCommand() file: layer1/Movie.cpp start line: 1137 end line: 1153 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 2140 unit: void UtilExpandArrayElements() file: layer0/Util.cpp start line: 244 end line: 261 size: 17 LOC McCabe index: 4 number of parameters: 5 id: 2141 unit: int WordMatcherMatchAlpha() file: layer0/Word.cpp start line: 488 end line: 505 size: 17 LOC McCabe index: 4 number of parameters: 2 id: 2142 unit: int WordMatcherMatchMixed() file: layer0/Word.cpp start line: 507 end line: 524 size: 17 LOC McCabe index: 4 number of parameters: 3 id: 2143 unit: int WordMatcherMatchInteger() file: layer0/Word.cpp start line: 543 end line: 560 size: 17 LOC McCabe index: 4 number of parameters: 2 id: 2144 unit: void renderTarget_t::resize() file: layer0/GenericBuffer.cpp start line: 444 end line: 464 size: 17 LOC McCabe index: 4 number of parameters: 1 id: 2145 unit: double distance_line2point3f() file: layer0/Vector.cpp start line: 1742 end line: 1762 size: 17 LOC McCabe index: 2 number of parameters: 4 id: 2146 unit: static void DieOutOfMemory() file: layer0/MemoryDebug.cpp start line: 51 end line: 68 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2147 unit: void MatrixMultiplyC44f() file: layer0/Matrix.cpp start line: 916 end line: 940 size: 17 LOC McCabe index: 2 number of parameters: 2 id: 2148 unit: static int cdiv_() file: layer0/Matrix.cpp start line: 2211 end line: 2243 size: 17 LOC McCabe index: 1 number of parameters: 6 id: 2149 unit: __inline__ static int inline_within3f() file: layer0/Vector.h start line: 458 end line: 474 size: 17 LOC McCabe index: 4 number of parameters: 3 id: 2150 unit: OVstatus OVLexicon_IncRef() file: ov/src/OVLexicon.cpp start line: 231 end line: 248 size: 17 LOC McCabe index: 4 number of parameters: 2 id: 2151 unit: int main() file: contrib/champ/strblock.c start line: 27 end line: 44 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 2152 unit: void ChampFree() file: contrib/champ/champ.c start line: 1726 end line: 1745 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2153 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp start line: 309 end line: 325 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2154 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 394 end line: 410 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2155 unit: static void convert_vmd_box_for_writing() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 54 end line: 72 size: 17 LOC McCabe index: 1 number of parameters: 4 id: 2156 unit: static int fio_open() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 266 end line: 286 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 2157 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 397 end line: 413 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2158 unit: static int write_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c start line: 182 end line: 213 size: 17 LOC McCabe index: 4 number of parameters: 2 id: 2159 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp start line: 294 end line: 311 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2160 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp start line: 154 end line: 170 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2161 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp start line: 173 end line: 190 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2162 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c start line: 317 end line: 333 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2163 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp start line: 128 end line: 144 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2164 unit: static int strnwscpy_shift() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 66 end line: 84 size: 17 LOC McCabe index: 9 number of parameters: 4 id: 2165 unit: static void close_psf_write() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 1051 end line: 1074 size: 17 LOC McCabe index: 7 number of parameters: 1 id: 2166 unit: static void get_xbgf_coordinates() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 138 end line: 156 size: 17 LOC McCabe index: 4 number of parameters: 4 id: 2167 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c start line: 301 end line: 317 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2168 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c start line: 166 end line: 182 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2169 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp start line: 215 end line: 231 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2170 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp start line: 687 end line: 703 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2171 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c start line: 238 end line: 254 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2172 unit: static int parse_parm7_atype() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 248 end line: 264 size: 17 LOC McCabe index: 4 number of parameters: 4 id: 2173 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp start line: 309 end line: 325 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2174 unit: VMDEXTERNSTATIC int hash_insert() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 151 end line: 174 size: 17 LOC McCabe index: 3 number of parameters: 3 id: 2175 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c start line: 298 end line: 314 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2176 unit: void describe_other_elements_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2875 end line: 2898 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 2177 unit: VMDEXTERNSTATIC int inthash_insert() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 150 end line: 173 size: 17 LOC McCabe index: 3 number of parameters: 3 id: 2178 unit: static void get_bgf_coordinates() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 115 end line: 133 size: 17 LOC McCabe index: 4 number of parameters: 4 id: 2179 unit: static void swap8_aligned() file: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h start line: 124 end line: 146 size: 17 LOC McCabe index: 2 number of parameters: 2 id: 2180 unit: void mdio_swap8() file: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h start line: 152 end line: 168 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2181 unit: static int mdio_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 574 end line: 595 size: 17 LOC McCabe index: 9 number of parameters: 2 id: 2182 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp start line: 317 end line: 333 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2183 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c start line: 259 end line: 275 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2184 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp start line: 168 end line: 184 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2185 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp start line: 559 end line: 576 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2186 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp start line: 297 end line: 313 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2187 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp start line: 242 end line: 258 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2188 unit: int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c start line: 269 end line: 285 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2189 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 371 end line: 387 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 2190 unit: int ReadPARM::read_fortran_12I6() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 952 end line: 972 size: 17 LOC McCabe index: 9 number of parameters: 3 id: 2191 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp start line: 206 end line: 222 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2192 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp start line: 252 end line: 268 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2193 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp start line: 326 end line: 342 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2194 unit: int AtomInfoKnownNucleicResName() file: layer2/AtomInfo.cpp start line: 592 end line: 611 size: 17 LOC McCabe index: 9 number of parameters: 1 id: 2195 unit: static int AtomInfoNameCompare() file: layer2/AtomInfo.cpp start line: 1933 end line: 1952 size: 17 LOC McCabe index: 6 number of parameters: 3 id: 2196 unit: int CoordSetGetAtomTxfVertex() file: layer2/CoordSet.cpp start line: 680 end line: 703 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 2197 unit: static int RepToTransparencySetting() file: layer2/CoordSet.cpp start line: 1284 end line: 1302 size: 17 LOC McCabe index: 7 number of parameters: 1 id: 2198 unit: void ObjectGadgetUpdateExtents() file: layer2/ObjectGadget.cpp start line: 238 end line: 256 size: 17 LOC McCabe index: 4 number of parameters: 1 id: 2199 unit: static void RepSurfaceFindAllPresentAtoms() file: layer2/RepSurface.cpp start line: 3997 end line: 4013 size: 17 LOC McCabe index: 7 number of parameters: 5 id: 2200 unit: int ObjectDistMoveWithObject() file: layer2/ObjectDist.cpp start line: 104 end line: 125 size: 17 LOC McCabe index: 6 number of parameters: 2 id: 2201 unit: void ObjectDistUpdateExtents() file: layer2/ObjectDist.cpp start line: 306 end line: 324 size: 17 LOC McCabe index: 4 number of parameters: 1 id: 2202 unit: static int ObjectDistDSetFromPyList() file: layer2/ObjectDist.cpp start line: 341 end line: 357 size: 17 LOC McCabe index: 6 number of parameters: 2 id: 2203 unit: PyMOLreturn_status PyMOL_CmdUnset() file: layer5/PyMOL.cpp start line: 1124 end line: 1140 size: 17 LOC McCabe index: 4 number of parameters: 6 id: 2204 unit: PyMOLreturn_float PyMOL_CmdGetAngle() file: layer5/PyMOL.cpp start line: 1231 end line: 1247 size: 17 LOC McCabe index: 1 number of parameters: 6 id: 2205 unit: PyMOLreturn_int_array PyMOL_GetReshapeInfo() file: layer5/PyMOL.cpp start line: 2717 end line: 2734 size: 17 LOC McCabe index: 4 number of parameters: 2 id: 2206 unit: PyMOLreturn_status PyMOL_CmdMapNew() file: layer5/PyMOL.cpp start line: 3196 end line: 3214 size: 17 LOC McCabe index: 1 number of parameters: 9 id: 2207 unit: int MaeExportGetRibbonStyle() file: layer3/MaeExportHelpers.cpp start line: 98 end line: 116 size: 17 LOC McCabe index: 7 number of parameters: 1 id: 2208 unit: void MoleculeExporter::populateBondRefs() file: layer3/MoleculeExporter.cpp start line: 400 end line: 423 size: 17 LOC McCabe index: 6 number of parameters: 0 id: 2209 unit: def _open() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 17 LOC McCabe index: 8 number of parameters: 2 id: 2210 unit: def __getattr__() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 2 id: 2211 unit: def root() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2212 unit: inline Vector transpose_mult() file: modules/cealign/src/tnt/tnt_matrix.h start line: 763 end line: 785 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 2213 unit: Fortran_Array2D Lapack_LinearSolve() file: modules/cealign/src/tnt/tnt_lapack.h start line: 30 end line: 55 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 2214 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2215 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2216 unit: def doAutoPick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 17 LOC McCabe index: 7 number of parameters: 2 id: 2217 unit: def addSkinMenuItems() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 2218 unit: def __init__() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 17 LOC McCabe index: 3 number of parameters: 5 id: 2219 unit: def _refresh() file: modules/pymol/internal.py start line: 0 end line: 0 size: 17 LOC McCabe index: 4 number of parameters: 2 id: 2220 unit: def dump_arg() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 2221 unit: def reference() file: modules/pymol/editing.py start line: 0 end line: 0 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 2222 unit: def load_pse() file: modules/pymol/importing.py start line: 0 end line: 0 size: 17 LOC McCabe index: 7 number of parameters: 5 id: 2223 unit: def get_metadata() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 17 LOC McCabe index: 5 number of parameters: 1 id: 2224 unit: def get_docstring() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 17 LOC McCabe index: 5 number of parameters: 1 id: 2225 unit: def page_installed() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2226 unit: def bind_mousewheel() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 17 LOC McCabe index: 3 number of parameters: 1 id: 2227 unit: def get_panel() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 17 LOC McCabe index: 3 number of parameters: 1 id: 2228 unit: def jagged_lines() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2229 unit: def dots() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2230 unit: def sticks() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2231 unit: def surface() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2232 unit: def spheres() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2233 unit: def do_key() file: modules/pymol/wizard/pseudoatom.py start line: 0 end line: 0 size: 17 LOC McCabe index: 8 number of parameters: 5 id: 2234 unit: def do_select() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 2 id: 2235 unit: def ray() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 2 id: 2236 unit: def animate() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 2 id: 2237 unit: def authorStamp() file: modules/pymol/headering.py start line: 0 end line: 0 size: 17 LOC McCabe index: 6 number of parameters: 2 id: 2238 unit: def pretty_solv() file: modules/pymol/preset.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 1 id: 2239 unit: def wrapper() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 17 LOC McCabe index: 6 number of parameters: 0 id: 2240 unit: def append_cyl() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 17 LOC McCabe index: 5 number of parameters: 1 id: 2241 unit: def camera_motion() file: modules/pymol/menu.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2242 unit: def spectrum() file: modules/pymol/menu.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2243 unit: def by_chain() file: modules/pymol/menu.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2244 unit: def label_props() file: modules/pymol/menu.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 2 id: 2245 unit: def enable_disable() file: modules/pymol/menu.py start line: 0 end line: 0 size: 17 LOC McCabe index: 6 number of parameters: 2 id: 2246 unit: def pick_menu() file: modules/pymol/menu.py start line: 0 end line: 0 size: 17 LOC McCabe index: 1 number of parameters: 3 id: 2247 unit: def rpcSphere() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 17 LOC McCabe index: 3 number of parameters: 7 id: 2248 unit: def rpcSpheres() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 17 LOC McCabe index: 4 number of parameters: 3 id: 2249 unit: def timed_roll() file: modules/pymol/movie.py start line: 0 end line: 0 size: 17 LOC McCabe index: 4 number of parameters: 4 id: 2250 unit: def expr_to_vect() file: modules/pymol/xray.py start line: 0 end line: 0 size: 17 LOC McCabe index: 4 number of parameters: 1 id: 2251 unit: def _ray() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 8 id: 2252 unit: def __init__() file: modules/chempy/tinker/state.py start line: 0 end line: 0 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 2253 unit: def insert_atom() file: modules/chempy/models.py start line: 0 end line: 0 size: 17 LOC McCabe index: 9 number of parameters: 3 id: 2254 unit: def sort() file: modules/chempy/models.py start line: 0 end line: 0 size: 17 LOC McCabe index: 5 number of parameters: 1 id: 2255 unit: def get_basis_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 17 LOC McCabe index: 4 number of parameters: 4 id: 2256 unit: void ExtrudeInit() file: layer1/Extrude.cpp start line: 57 end line: 75 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 2257 unit: void ExtrudeBuildNormals2f() file: layer1/Extrude.cpp start line: 510 end line: 528 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2258 unit: static float ZLineClipPointNoZCheck() file: layer1/Basis.cpp start line: 1149 end line: 1179 size: 16 LOC McCabe index: 3 number of parameters: 4 id: 2259 unit: static float SceneGetFPS() file: layer1/Scene.cpp start line: 388 end line: 403 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2260 unit: void ScenePurgeImageImpl() file: layer1/Scene.cpp start line: 412 end line: 427 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2261 unit: static void SceneClipSetWithDirty() file: layer1/Scene.cpp start line: 1209 end line: 1229 size: 16 LOC McCabe index: 3 number of parameters: 4 id: 2262 unit: int CScene::release() file: layer1/Scene.cpp start line: 5802 end line: 5817 size: 16 LOC McCabe index: 2 number of parameters: 4 id: 2263 unit: void ScenePopModelViewMatrix() file: layer1/Scene.cpp start line: 7080 end line: 7098 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2264 unit: void SceneSetPointToWorldScreenRelative() file: layer1/Scene.cpp start line: 7282 end line: 7297 size: 16 LOC McCabe index: 1 number of parameters: 3 id: 2265 unit: static void SettingUniqueInit() file: layer1/Setting.cpp start line: 586 end line: 603 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2266 unit: static int SettingCheckUseShaders() file: layer1/Setting.cpp start line: 973 end line: 988 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 2267 unit: int RayHashThread() file: layer1/Ray.cpp start line: 2953 end line: 2970 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2268 unit: void RayPushTTT() file: layer1/Ray.cpp start line: 7697 end line: 7712 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2269 unit: static void RayTransformNormals33() file: layer1/Ray.cpp start line: 7759 end line: 7774 size: 16 LOC McCabe index: 3 number of parameters: 4 id: 2270 unit: void RaySetPointToWorldScreenRelative() file: layer1/Ray.cpp start line: 7844 end line: 7860 size: 16 LOC McCabe index: 1 number of parameters: 3 id: 2271 unit: bool PConvFromPyObject() file: layer1/PConv.h start line: 359 end line: 380 size: 16 LOC McCabe index: 5 number of parameters: 3 id: 2272 unit: int PConvPyListToExtent() file: layer1/PConv.cpp start line: 98 end line: 114 size: 16 LOC McCabe index: 6 number of parameters: 3 id: 2273 unit: int PConvPyIntToInt() file: layer1/PConv.cpp start line: 278 end line: 293 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2274 unit: int PConvPyIntToChar() file: layer1/PConv.cpp start line: 308 end line: 323 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2275 unit: float ShakerGetPyra() file: layer1/Shaker.cpp start line: 70 end line: 87 size: 16 LOC McCabe index: 1 number of parameters: 5 id: 2276 unit: void GLAPIENTRY gl_debug_proc() file: layer0/GraphicsUtil.cpp start line: 54 end line: 69 size: 16 LOC McCabe index: 2 number of parameters: 7 id: 2277 unit: static int integer_match() file: layer0/Word.cpp start line: 526 end line: 541 size: 16 LOC McCabe index: 9 number of parameters: 3 id: 2278 unit: int WordMatchExact() file: layer0/Word.cpp start line: 696 end line: 715 size: 16 LOC McCabe index: 7 number of parameters: 4 id: 2279 unit: void CrystalInit() file: layer0/Crystal.cpp start line: 73 end line: 89 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2280 unit: void CShaderPrg::Set_Matrices() file: layer0/ShaderPrg.cpp start line: 356 end line: 378 size: 16 LOC McCabe index: 4 number of parameters: 0 id: 2281 unit: void get_divergent3f() file: layer0/Vector.cpp start line: 177 end line: 192 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2282 unit: int MapCacheInit() file: layer0/Map.cpp start line: 53 end line: 72 size: 16 LOC McCabe index: 2 number of parameters: 4 id: 2283 unit: static int TriangleActivateEdges() file: layer0/Triangle.cpp start line: 452 end line: 467 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2284 unit: void MatrixTransformTTTfN3f() file: layer0/Matrix.cpp start line: 817 end line: 832 size: 16 LOC McCabe index: 2 number of parameters: 4 id: 2285 unit: void MatrixTransformR44fN3f() file: layer0/Matrix.cpp start line: 836 end line: 851 size: 16 LOC McCabe index: 2 number of parameters: 4 id: 2286 unit: static void IsosurfPurge() file: layer0/Isosurf.cpp start line: 1023 end line: 1038 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2287 unit: void ListPrime() file: contrib/champ/list.c start line: 222 end line: 238 size: 16 LOC McCabe index: 2 number of parameters: 3 id: 2288 unit: void ListElemFreeChain() file: contrib/champ/list.c start line: 268 end line: 284 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2289 unit: int ChampMatch_1VN_N() file: contrib/champ/champ.c start line: 1935 end line: 1951 size: 16 LOC McCabe index: 3 number of parameters: 3 id: 2290 unit: int ChampMatch_NV1_N() file: contrib/champ/champ.c start line: 1983 end line: 1998 size: 16 LOC McCabe index: 3 number of parameters: 5 id: 2291 unit: static fio_size_t fio_fread() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 132 end line: 149 size: 16 LOC McCabe index: 3 number of parameters: 4 id: 2292 unit: static fio_size_t fio_fwrite() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 165 end line: 182 size: 16 LOC McCabe index: 3 number of parameters: 4 id: 2293 unit: static int vtf_parse_pbc() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 724 end line: 741 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2294 unit: static int vtf_parse_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 746 end line: 761 size: 16 LOC McCabe index: 6 number of parameters: 2 id: 2295 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp start line: 242 end line: 257 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2296 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp start line: 313 end line: 328 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2297 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 500 end line: 515 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2298 unit: static int fpexpftoc() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 1028 end line: 1062 size: 16 LOC McCabe index: 9 number of parameters: 1 id: 2299 unit: static void whereami() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 1097 end line: 1113 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2300 unit: static int parse_parm7_resnames() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 267 end line: 283 size: 16 LOC McCabe index: 4 number of parameters: 4 id: 2301 unit: VMDEXTERNSTATIC void hash_destroy() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 234 end line: 252 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2302 unit: static int read_basis_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 209 end line: 230 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 2303 unit: static int read_charmm_4dim() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 492 end line: 512 size: 16 LOC McCabe index: 8 number of parameters: 3 id: 2304 unit: VMDEXTERNSTATIC void inthash_destroy() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 231 end line: 249 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2305 unit: uint32_t machineEndianism() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 259 end line: 276 size: 16 LOC McCabe index: 1 number of parameters: 0 id: 2306 unit: uint32_t fletcher() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 286 end line: 303 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2307 unit: static std::string framefile() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 766 end line: 782 size: 16 LOC McCabe index: 1 number of parameters: 5 id: 2308 unit: static void close_bgf_write() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 603 end line: 618 size: 16 LOC McCabe index: 7 number of parameters: 1 id: 2309 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp start line: 501 end line: 516 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2310 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp start line: 297 end line: 312 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2311 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp start line: 234 end line: 249 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2312 unit: VMDPLUGIN_API int VMDPLUGIN_init() file: contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp start line: 284 end line: 299 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2313 unit: static void get_pdb_header() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 187 end line: 204 size: 16 LOC McCabe index: 4 number of parameters: 4 id: 2314 unit: void set_attrs() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1100 end line: 1116 size: 16 LOC McCabe index: 7 number of parameters: 1 id: 2315 unit: void write_ct_sites() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1479 end line: 1495 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2316 unit: static int RepSphereRenderRay() file: layer2/RepSphere.cpp start line: 99 end line: 114 size: 16 LOC McCabe index: 3 number of parameters: 3 id: 2317 unit: static int ObjectMeshAllStatesFromPyList() file: layer2/ObjectMesh.cpp start line: 199 end line: 215 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 2318 unit: static int ObjectVolumeAllStatesFromPyList() file: layer2/ObjectVolume.cpp start line: 240 end line: 256 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 2319 unit: static size_t createColorTexture() file: layer2/ObjectVolume.cpp start line: 669 end line: 684 size: 16 LOC McCabe index: 1 number of parameters: 3 id: 2320 unit: void CoordSet::enumIndices() file: layer2/CoordSet.cpp start line: 1650 end line: 1666 size: 16 LOC McCabe index: 3 number of parameters: 0 id: 2321 unit: static int ObjectSurfaceAllStatesFromPyList() file: layer2/ObjectSurface.cpp start line: 166 end line: 181 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 2322 unit: void immediate_draw_masked_vertices() file: layer2/RepSurface.cpp start line: 153 end line: 168 size: 16 LOC McCabe index: 5 number of parameters: 5 id: 2323 unit: int RepSurfaceSameVis() file: layer2/RepSurface.cpp start line: 2141 end line: 2158 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2324 unit: void GadgetSet::fFree() file: layer2/GadgetSet.cpp start line: 429 end line: 444 size: 16 LOC McCabe index: 2 number of parameters: 0 id: 2325 unit: static int ObjectSliceAllStatesFromPyList() file: layer2/ObjectSlice.cpp start line: 141 end line: 156 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 2326 unit: static int ObjectMapAllStatesFromPyList() file: layer2/ObjectMap.cpp start line: 1538 end line: 1553 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 2327 unit: static float ccp4_next_value() file: layer2/ObjectMap.cpp start line: 2353 end line: 2368 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2328 unit: PyMOLreturn_float PyMOL_CmdIsolevel() file: layer5/PyMOL.cpp start line: 1423 end line: 1439 size: 16 LOC McCabe index: 2 number of parameters: 6 id: 2329 unit: static int word_count() file: layer5/PyMOL.cpp start line: 1441 end line: 1456 size: 16 LOC McCabe index: 9 number of parameters: 1 id: 2330 unit: void PyMOL_SetProgress() file: layer5/PyMOL.cpp start line: 1922 end line: 1937 size: 16 LOC McCabe index: 6 number of parameters: 4 id: 2331 unit: static void MainDrag() file: layer5/main.cpp start line: 413 end line: 434 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2332 unit: static void MainSpecial() file: layer5/main.cpp start line: 885 end line: 904 size: 16 LOC McCabe index: 5 number of parameters: 3 id: 2333 unit: void MenuActivate() file: layer4/Menu.cpp start line: 29 end line: 47 size: 16 LOC McCabe index: 3 number of parameters: 8 id: 2334 unit: void MenuActivate2Arg() file: layer4/Menu.cpp start line: 70 end line: 87 size: 16 LOC McCabe index: 3 number of parameters: 9 id: 2335 unit: void MenuActivate0Arg() file: layer4/Menu.cpp start line: 109 end line: 126 size: 16 LOC McCabe index: 3 number of parameters: 7 id: 2336 unit: void EditorDefineExtraPks() file: layer3/Editor.cpp start line: 332 end line: 349 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2337 unit: void MoleculeExporter::setRefObject() file: layer3/MoleculeExporter.cpp start line: 365 end line: 385 size: 16 LOC McCabe index: 6 number of parameters: 2 id: 2338 unit: function walk() file: modules/web/javascript/json2.js start line: 404 end line: 423 size: 16 LOC McCabe index: 6 number of parameters: 2 id: 2339 unit: this._result = function() file: modules/web/javascript/pymol.js start line: 152 end line: 170 size: 16 LOC McCabe index: 6 number of parameters: 1 id: 2340 unit: function parse_file() file: modules/web/javascript/pymol.js start line: 1103 end line: 1118 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2341 unit: def lineeditKeyPressEventFilter() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 16 LOC McCabe index: 7 number of parameters: 3 id: 2342 unit: def show_about() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2343 unit: def dragEnterEvent() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2344 unit: def paintGrid() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 3 id: 2345 unit: def paintEvent() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 2 id: 2346 unit: def displayTextDialog() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 2 id: 2347 unit: def sculpt_activate() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2348 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2349 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 2350 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2351 unit: def staticaction() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 6 number of parameters: 1 id: 2352 unit: def doAutoPick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 6 number of parameters: 2 id: 2353 unit: def removeAtom() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2354 unit: def ask_partial() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 16 LOC McCabe index: 6 number of parameters: 3 id: 2355 unit: TNT::Array2D getHouseholder() file: modules/cealign/src/tnt/jama_qr.h start line: 130 end line: 149 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2356 unit: TNT::Array2D getR() file: modules/cealign/src/tnt/jama_qr.h start line: 157 end line: 172 size: 16 LOC McCabe index: 5 number of parameters: 0 id: 2357 unit: Matrix getHouseholder() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1660 end line: 1679 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2358 unit: Matrix getR() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1687 end line: 1702 size: 16 LOC McCabe index: 5 number of parameters: 0 id: 2359 unit: def confirm_quit() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 16 LOC McCabe index: 6 number of parameters: 2 id: 2360 unit: def my_activate() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 16 LOC McCabe index: 7 number of parameters: 4 id: 2361 unit: def update_scene_menu() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 1 id: 2362 unit: def sculpt_activate() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 2363 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2364 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2365 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 16 LOC McCabe index: 7 number of parameters: 2 id: 2366 unit: def canvas_pick() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 16 LOC McCabe index: 4 number of parameters: 4 id: 2367 unit: def tidy() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 3 id: 2368 unit: def __init__() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 3 id: 2369 unit: def _invoke_key() file: modules/pymol/internal.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 3 id: 2370 unit: def initializePlugins() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 1 id: 2371 unit: def status_update() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 1 id: 2372 unit: def find_surface_atoms() file: modules/pymol/util.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 4 id: 2373 unit: def do_key() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 16 LOC McCabe index: 6 number of parameters: 5 id: 2374 unit: def smooth_lines() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2375 unit: def surface_calculation() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2376 unit: def mesh_calculation() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 2377 unit: def ray_trace2() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2378 unit: def do_pick() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2379 unit: def do_select() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2380 unit: def get_prompt() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2381 unit: def _transfer_dihedral() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2382 unit: def get_panel() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 1 id: 2383 unit: def interface() file: modules/pymol/preset.py start line: 0 end line: 0 size: 16 LOC McCabe index: 2 number of parameters: 2 id: 2384 unit: def _unit2px() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 16 LOC McCabe index: 7 number of parameters: 3 id: 2385 unit: def expand() file: modules/pymol/menu.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 2386 unit: def around() file: modules/pymol/menu.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 2387 unit: def extend() file: modules/pymol/menu.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 2388 unit: def surface_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 2389 unit: def mesh_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 16 LOC McCabe index: 1 number of parameters: 2 id: 2390 unit: def colorObj() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2391 unit: def process_request() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2392 unit: def process_urlpath() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 16 LOC McCabe index: 12 number of parameters: 1 id: 2393 unit: def echo_args() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 16 LOC McCabe index: 6 number of parameters: 1 id: 2394 unit: def machine_get_clipboard() file: modules/pymol/xwin.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 0 id: 2395 unit: def assign_types() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2396 unit: def read_symmetry() file: modules/chempy/cif.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2397 unit: def reset() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 2398 unit: def __getitem__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 2399 unit: def client_test() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 16 LOC McCabe index: 3 number of parameters: 2 id: 2400 unit: def updateFromList() file: modules/chempy/mmd.py start line: 0 end line: 0 size: 16 LOC McCabe index: 5 number of parameters: 3 id: 2401 unit: void ExtrudeCGOTrace() file: layer1/Extrude.cpp start line: 563 end line: 577 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2402 unit: void TextSetPickColor() file: layer1/Text.cpp start line: 292 end line: 308 size: 15 LOC McCabe index: 2 number of parameters: 3 id: 2403 unit: static int get_and_check_setting_index() file: layer1/P.cpp start line: 401 end line: 418 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2404 unit: void PLogFlush() file: layer1/P.cpp start line: 2476 end line: 2490 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2405 unit: void PCatchInit() file: layer1/P.cpp start line: 2847 end line: 2861 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2406 unit: void SceneInvalidateCopy() file: layer1/Scene.cpp start line: 429 end line: 443 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2407 unit: void SceneWindowSphere() file: layer1/Scene.cpp start line: 2384 end line: 2403 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 2408 unit: int SceneObjectAdd() file: layer1/Scene.cpp start line: 2470 end line: 2484 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 2409 unit: int CScene::drag() file: layer1/Scene.cpp start line: 5780 end line: 5794 size: 15 LOC McCabe index: 2 number of parameters: 3 id: 2410 unit: void SceneResetNormalToViewVector() file: layer1/Scene.cpp start line: 6022 end line: 6036 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 2411 unit: void SettingUniqueResetAll() file: layer1/Setting.cpp start line: 486 end line: 502 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2412 unit: int SettingGetTextValue() file: layer1/Setting.cpp start line: 1140 end line: 1157 size: 15 LOC McCabe index: 4 number of parameters: 5 id: 2413 unit: int SettingSet_3fv() file: layer1/Setting.cpp start line: 1828 end line: 1842 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 2414 unit: int SettingCheckFontID() file: layer1/Setting.cpp start line: 3079 end line: 3093 size: 15 LOC McCabe index: 7 number of parameters: 4 id: 2415 unit: static unsigned int get_hash() file: layer1/Character.cpp start line: 34 end line: 48 size: 15 LOC McCabe index: 1 number of parameters: 1 id: 2416 unit: int CharacterGetGeometry() file: layer1/Character.cpp start line: 385 end line: 399 size: 15 LOC McCabe index: 3 number of parameters: 7 id: 2417 unit: void CharacterFree() file: layer1/Character.cpp start line: 527 end line: 541 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2418 unit: float RayGetScreenVertexScale() file: layer1/Ray.cpp start line: 144 end line: 161 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 2419 unit: static void RayApplyMatrix33() file: layer1/Ray.cpp start line: 7727 end line: 7741 size: 15 LOC McCabe index: 2 number of parameters: 4 id: 2420 unit: static void RayApplyMatrixInverse33() file: layer1/Ray.cpp start line: 7743 end line: 7757 size: 15 LOC McCabe index: 2 number of parameters: 4 id: 2421 unit: float RayGetScaledAllAxesAtPoint() file: layer1/Ray.cpp start line: 7862 end line: 7879 size: 15 LOC McCabe index: 1 number of parameters: 5 id: 2422 unit: void SeqUpdate() file: layer1/Seq.cpp start line: 117 end line: 132 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2423 unit: bool PConvFromPyObject() file: layer1/PConv.h start line: 305 end line: 325 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 2424 unit: void OrthoRenderCGO() file: layer1/Ortho.cpp start line: 1958 end line: 1972 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 2425 unit: void OrthoReshapeWizard() file: layer1/Ortho.cpp start line: 2304 end line: 2321 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2426 unit: int WizardInit() file: layer1/Wizard.cpp start line: 1007 end line: 1024 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2427 unit: int PConvAttrToIntArrayInPlace() file: layer1/PConv.cpp start line: 148 end line: 162 size: 15 LOC McCabe index: 3 number of parameters: 4 id: 2428 unit: int PConvAttrToFloatArrayInPlace() file: layer1/PConv.cpp start line: 164 end line: 178 size: 15 LOC McCabe index: 3 number of parameters: 4 id: 2429 unit: int PConvAttrToStrMaxLen() file: layer1/PConv.cpp start line: 180 end line: 194 size: 15 LOC McCabe index: 3 number of parameters: 4 id: 2430 unit: int PConvAttrToPtr() file: layer1/PConv.cpp start line: 196 end line: 210 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 2431 unit: int PConvPyStrToStr() file: layer1/PConv.cpp start line: 262 end line: 276 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 2432 unit: void PConvFloat3ToPyObjAttr() file: layer1/PConv.cpp start line: 467 end line: 482 size: 15 LOC McCabe index: 5 number of parameters: 3 id: 2433 unit: static void ColladaWriteCommonColorElement() file: layer1/COLLADA.cpp start line: 223 end line: 237 size: 15 LOC McCabe index: 2 number of parameters: 4 id: 2434 unit: static void ColladaWriteCommonFloatElement() file: layer1/COLLADA.cpp start line: 241 end line: 255 size: 15 LOC McCabe index: 2 number of parameters: 4 id: 2435 unit: static void FontGLUTSave() file: layer1/FontGLUT.cpp start line: 30 end line: 45 size: 15 LOC McCabe index: 1 number of parameters: 1 id: 2436 unit: int MovieFrameToIndex() file: layer1/Movie.cpp start line: 1040 end line: 1054 size: 15 LOC McCabe index: 6 number of parameters: 2 id: 2437 unit: int MovieInit() file: layer1/Movie.cpp start line: 1968 end line: 1984 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 2438 unit: void print_trace() file: layer0/GraphicsUtil.cpp start line: 15 end line: 33 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 2439 unit: void ErrPointer() file: layer0/Err.cpp start line: 42 end line: 56 size: 15 LOC McCabe index: 1 number of parameters: 3 id: 2440 unit: void textureBuffer_t::genBuffer() file: layer0/GenericBuffer.cpp start line: 177 end line: 192 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 2441 unit: void glOrtho44f() file: layer0/Vector.cpp start line: 409 end line: 424 size: 15 LOC McCabe index: 2 number of parameters: 7 id: 2442 unit: void glFrustum44f() file: layer0/Vector.cpp start line: 426 end line: 441 size: 15 LOC McCabe index: 2 number of parameters: 7 id: 2443 unit: void copy44d33f() file: layer0/Vector.cpp start line: 489 end line: 505 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 2444 unit: void copy44f33f() file: layer0/Vector.cpp start line: 507 end line: 523 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 2445 unit: void clamp3f() file: layer0/Vector.cpp start line: 1685 end line: 1699 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 2446 unit: double matdiffsq() file: layer0/Vector.cpp start line: 1802 end line: 1821 size: 15 LOC McCabe index: 1 number of parameters: 3 id: 2447 unit: float max3() file: layer0/Vector.cpp start line: 2077 end line: 2091 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 2448 unit: void bind_attrib() file: layer0/GenericBuffer.h start line: 449 end line: 463 size: 15 LOC McCabe index: 8 number of parameters: 2 id: 2449 unit: int ListElemPop() file: contrib/champ/list.c start line: 240 end line: 254 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 2450 unit: void ChampCheckCharge() file: contrib/champ/champ.c start line: 1140 end line: 1156 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2451 unit: void ChampGeneralize() file: contrib/champ/champ.c start line: 3942 end line: 3960 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2452 unit: static void normalize3f() file: contrib/champ/champ.c start line: 4298 end line: 4312 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2453 unit: static fio_size_t fio_ftell() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 220 end line: 243 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 2454 unit: static void vtf_create_atoms_as_needed() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 271 end line: 288 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2455 unit: static int vtf_read_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 1171 end line: 1191 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 2456 unit: int Vtfplugin_Init() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 1341 end line: 1360 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 2457 unit: static void strnwscpy() file: contrib/uiuc/plugins/molfile_plugin/src/fortread.h start line: 133 end line: 149 size: 15 LOC McCabe index: 6 number of parameters: 3 id: 2458 unit: static int read_parm_structure() file: contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp start line: 60 end line: 79 size: 15 LOC McCabe index: 2 number of parameters: 3 id: 2459 unit: static void close_xbgf_write() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 632 end line: 647 size: 15 LOC McCabe index: 6 number of parameters: 1 id: 2460 unit: static void close_xbgf_read() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 651 end line: 666 size: 15 LOC McCabe index: 8 number of parameters: 1 id: 2461 unit: static int parse_parm7_charge() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 214 end line: 230 size: 15 LOC McCabe index: 5 number of parameters: 4 id: 2462 unit: static int parse_parm7_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 319 end line: 335 size: 15 LOC McCabe index: 4 number of parameters: 5 id: 2463 unit: static int read_spider_data() file: contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp start line: 273 end line: 293 size: 15 LOC McCabe index: 2 number of parameters: 4 id: 2464 unit: VMDEXTERNSTATIC void hash_init() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 63 end line: 86 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2465 unit: void add_element() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2242 end line: 2262 size: 15 LOC McCabe index: 2 number of parameters: 3 id: 2466 unit: void describe_element_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2746 end line: 2765 size: 15 LOC McCabe index: 2 number of parameters: 3 id: 2467 unit: static void getNextWord() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 293 end line: 311 size: 15 LOC McCabe index: 5 number of parameters: 3 id: 2468 unit: static void initCharToNum() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 423 end line: 439 size: 15 LOC McCabe index: 5 number of parameters: 0 id: 2469 unit: VMDEXTERNSTATIC void inthash_init() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 62 end line: 85 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2470 unit: static void swap4_unaligned() file: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h start line: 46 end line: 61 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 2471 unit: static void close_mol2_write() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 505 end line: 519 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 2472 unit: static int read_volumetric_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1357 end line: 1375 size: 15 LOC McCabe index: 7 number of parameters: 3 id: 2473 unit: static int read_volumetric_data() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1377 end line: 1395 size: 15 LOC McCabe index: 6 number of parameters: 4 id: 2474 unit: static int xtc_float() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1536 end line: 1556 size: 15 LOC McCabe index: 6 number of parameters: 2 id: 2475 unit: static void calcNormals() file: contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp start line: 59 end line: 73 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 2476 unit: static int read_plt_data() file: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp start line: 133 end line: 152 size: 15 LOC McCabe index: 3 number of parameters: 4 id: 2477 unit: static void xsf_buildinvmat() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 216 end line: 232 size: 15 LOC McCabe index: 1 number of parameters: 4 id: 2478 unit: static int read_grd_data() file: contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp start line: 216 end line: 236 size: 15 LOC McCabe index: 3 number of parameters: 4 id: 2479 unit: virtual void set_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1011 end line: 1026 size: 15 LOC McCabe index: 12 number of parameters: 1 id: 2480 unit: char MMTF_parser_fetch_char() file: contrib/mmtf-c/mmtf_parser.cpp start line: 767 end line: 782 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 2481 unit: bool MMTF_unpack_from_string() file: contrib/mmtf-c/mmtf_parser.cpp start line: 982 end line: 1005 size: 15 LOC McCabe index: 1 number of parameters: 3 id: 2482 unit: def run() file: setup.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 2483 unit: void AtomInfoCleanAtomName() file: layer2/AtomInfo.cpp start line: 55 end line: 69 size: 15 LOC McCabe index: 12 number of parameters: 1 id: 2484 unit: bool isVisible() file: layer2/AtomInfo.h start line: 331 end line: 351 size: 15 LOC McCabe index: 5 number of parameters: 0 id: 2485 unit: void RepDotFree() file: layer2/RepDot.cpp start line: 43 end line: 57 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2486 unit: static std::string make_mm_atom_site_label() file: layer2/CifMoleculeReader.cpp start line: 160 end line: 174 size: 15 LOC McCabe index: 1 number of parameters: 7 id: 2487 unit: int ObjectVolumeSetRamp() file: layer2/ObjectVolume.cpp start line: 1346 end line: 1365 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 2488 unit: void AtomInfoTypeConverter::copy() file: layer2/AtomInfoHistory.cpp start line: 82 end line: 96 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 2489 unit: void Copy_Into_BondType_From_Version() file: layer2/BondTypeHistory.cpp start line: 41 end line: 55 size: 15 LOC McCabe index: 4 number of parameters: 4 id: 2490 unit: void drawLine2DCross() file: layer2/RepLabel.cpp start line: 211 end line: 226 size: 15 LOC McCabe index: 1 number of parameters: 6 id: 2491 unit: static void ObjectSliceInvalidate() file: layer2/ObjectSlice.cpp start line: 226 end line: 240 size: 15 LOC McCabe index: 5 number of parameters: 4 id: 2492 unit: static void AddOrthoOutputIfMatchesTags() file: layer2/ObjectMolecule2.cpp start line: 76 end line: 92 size: 15 LOC McCabe index: 7 number of parameters: 7 id: 2493 unit: int ObjectMoleculeIsAtomBondedToName() file: layer2/ObjectMolecule2.cpp start line: 779 end line: 794 size: 15 LOC McCabe index: 5 number of parameters: 4 id: 2494 unit: static int get_multi_object_status() file: layer2/ObjectMolecule2.cpp start line: 1571 end line: 1588 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2495 unit: float ObjectMoleculeGetMaxVDW() file: layer2/ObjectMolecule2.cpp start line: 3496 end line: 3510 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2496 unit: static void ObjectMapInvalidate() file: layer2/ObjectMap.cpp start line: 1816 end line: 1830 size: 15 LOC McCabe index: 6 number of parameters: 4 id: 2497 unit: PyMOLreturn_status PyMOL_CmdClip() file: layer5/PyMOL.cpp start line: 901 end line: 915 size: 15 LOC McCabe index: 2 number of parameters: 6 id: 2498 unit: PyMOLreturn_float PyMOL_CmdGetDistance() file: layer5/PyMOL.cpp start line: 1195 end line: 1209 size: 15 LOC McCabe index: 1 number of parameters: 5 id: 2499 unit: int PyMOL_GetRedisplay() file: layer5/PyMOL.cpp start line: 2923 end line: 2939 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2500 unit: void PyMOL_SetStereoCapable() file: layer5/PyMOL.cpp start line: 3069 end line: 3084 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2501 unit: static void APIEnter() file: layer4/Cmd.cpp start line: 177 end line: 199 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 2502 unit: int EditorGetScheme() file: layer3/Editor.cpp start line: 65 end line: 80 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2503 unit: void EditorSetDrag() file: layer3/Editor.cpp start line: 1793 end line: 1808 size: 15 LOC McCabe index: 4 number of parameters: 5 id: 2504 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 741 end line: 758 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 2505 unit: void writeProperties() file: layer3/MoleculeExporter.cpp start line: 1608 end line: 1628 size: 15 LOC McCabe index: 5 number of parameters: 0 id: 2506 unit: def create_buildinfo() file: create_shadertext.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2507 unit: def _edit_pymolrc() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2508 unit: def pymolviewport() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 2509 unit: def eventFilter() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 15 LOC McCabe index: 6 number of parameters: 3 id: 2510 unit: def session_save_as() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2511 unit: Matrix getL() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1391 end line: 1405 size: 15 LOC McCabe index: 5 number of parameters: 0 id: 2512 unit: Array2D getL() file: modules/cealign/src/tnt/jama_lu.h start line: 167 end line: 181 size: 15 LOC McCabe index: 5 number of parameters: 0 id: 2513 unit: def askopenfilename() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2514 unit: def log_resume() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 2515 unit: def log_append() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 2516 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2517 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 2518 unit: def removeAtom() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2519 unit: def add_point() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 15 LOC McCabe index: 3 number of parameters: 4 id: 2520 unit: def cleanupGeneratedPdbOrPqrFile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 2521 unit: def get() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 2522 unit: def trim_nester() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 15 LOC McCabe index: 6 number of parameters: 1 id: 2523 unit: def addPluginManagerMenuItem() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 2524 unit: def __getattr__() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 2525 unit: def mass_align() file: modules/pymol/util.py start line: 0 end line: 0 size: 15 LOC McCabe index: 7 number of parameters: 4 id: 2526 unit: def compute_mass() file: modules/pymol/util.py start line: 0 end line: 0 size: 15 LOC McCabe index: 6 number of parameters: 1 id: 2527 unit: def enable_all_shaders() file: modules/pymol/util.py start line: 0 end line: 0 size: 15 LOC McCabe index: 1 number of parameters: 1 id: 2528 unit: def cbc() file: modules/pymol/util.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 2529 unit: def updates() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2530 unit: def get_selection_name() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 15 LOC McCabe index: 8 number of parameters: 1 id: 2531 unit: def get_prompt() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 2532 unit: def __init__() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 2533 unit: def loadUi() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2534 unit: def zoom_organic() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2535 unit: def from_r3d() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 2536 unit: def quadric() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 2537 unit: def _get_dump_str() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 2538 unit: def map_mesh() file: modules/pymol/menu.py start line: 0 end line: 0 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 2539 unit: def map_surface() file: modules/pymol/menu.py start line: 0 end line: 0 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 2540 unit: def scene_main() file: modules/pymol/menu.py start line: 0 end line: 0 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 2541 unit: def session_restore_wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2542 unit: def _feedback() file: modules/pymol/feedingback.py start line: 0 end line: 0 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 2543 unit: def find_exe() file: modules/pymol/movie.py start line: 0 end line: 0 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 2544 unit: def __getattr__() file: modules/pymol2/cmd2.py start line: 0 end line: 0 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 2545 unit: def get_residues() file: modules/chempy/models.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 2546 unit: def get_min_max() file: modules/chempy/models.py start line: 0 end line: 0 size: 15 LOC McCabe index: 9 number of parameters: 1 id: 2547 unit: def convert_to_connected() file: modules/chempy/models.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 2548 unit: def __init__() file: modules/chempy/cif.py start line: 0 end line: 0 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 2549 unit: def fromFile() file: modules/chempy/arc.py start line: 0 end line: 0 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 2550 unit: def from_numpy() file: modules/chempy/brick.py start line: 0 end line: 0 size: 15 LOC McCabe index: 2 number of parameters: 6 id: 2551 unit: def __init__() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 15 LOC McCabe index: 1 number of parameters: 7 id: 2552 unit: void ExtrudeFree() file: layer1/Extrude.cpp start line: 2260 end line: 2273 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2553 unit: void BasisFinish() file: layer1/Basis.cpp start line: 3637 end line: 3650 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 2554 unit: void TextSetLabPos() file: layer1/Text.cpp start line: 123 end line: 136 size: 14 LOC McCabe index: 3 number of parameters: 4 id: 2555 unit: void WrapperObjectReset() file: layer1/P.cpp start line: 2101 end line: 2114 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2556 unit: int PPovrayRender() file: layer1/P.cpp start line: 2322 end line: 2335 size: 14 LOC McCabe index: 1 number of parameters: 7 id: 2557 unit: int SceneLoopClick() file: layer1/Scene.cpp start line: 482 end line: 495 size: 14 LOC McCabe index: 1 number of parameters: 5 id: 2558 unit: static void interlace() file: layer1/Scene.cpp start line: 1868 end line: 1881 size: 14 LOC McCabe index: 4 number of parameters: 4 id: 2559 unit: void SceneOriginSet() file: layer1/Scene.cpp start line: 2452 end line: 2466 size: 14 LOC McCabe index: 2 number of parameters: 3 id: 2560 unit: void SceneSetNames() file: layer1/Scene.cpp start line: 2705 end line: 2720 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 2561 unit: void SceneGetEyeNormal() file: layer1/Scene.cpp start line: 4416 end line: 4431 size: 14 LOC McCabe index: 1 number of parameters: 3 id: 2562 unit: void SceneGenerateMatrixToAnotherZFromZ() file: layer1/Scene.cpp start line: 7237 end line: 7250 size: 14 LOC McCabe index: 1 number of parameters: 4 id: 2563 unit: static void SettingUniqueExpand() file: layer1/Setting.cpp start line: 163 end line: 177 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2564 unit: bool SettingGet() file: layer1/Setting.cpp start line: 1617 end line: 1630 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2565 unit: static void CharacterAllocMore() file: layer1/Character.cpp start line: 420 end line: 433 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2566 unit: int PopInit() file: layer1/Pop.cpp start line: 62 end line: 78 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2567 unit: int SeqInit() file: layer1/Seq.cpp start line: 736 end line: 750 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2568 unit: static void SymmetryDump44f() file: layer1/Symmetry.cpp start line: 98 end line: 111 size: 14 LOC McCabe index: 2 number of parameters: 3 id: 2569 unit: int ColorGetNext() file: layer1/Color.cpp start line: 143 end line: 157 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2570 unit: void ColorForgetExt() file: layer1/Color.cpp start line: 311 end line: 325 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2571 unit: void ColorFree() file: layer1/Color.cpp start line: 823 end line: 836 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2572 unit: bool PConvFromPyObject() file: layer1/PConv.h start line: 331 end line: 350 size: 14 LOC McCabe index: 4 number of parameters: 3 id: 2573 unit: int ControlInit() file: layer1/Control.cpp start line: 865 end line: 878 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2574 unit: void OrthoPopMatrix() file: layer1/Ortho.cpp start line: 2692 end line: 2706 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2575 unit: static int ReachedXmlNodeSizeLimit() file: layer1/COLLADA.cpp start line: 81 end line: 94 size: 14 LOC McCabe index: 5 number of parameters: 4 id: 2576 unit: static void ColladaWriteTrianglesVCountElement() file: layer1/COLLADA.cpp start line: 515 end line: 531 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 2577 unit: static void ColladaWriteTrianglesElement() file: layer1/COLLADA.cpp start line: 544 end line: 561 size: 14 LOC McCabe index: 3 number of parameters: 5 id: 2578 unit: void ShakerAddPyraCon() file: layer1/Shaker.cpp start line: 289 end line: 303 size: 14 LOC McCabe index: 1 number of parameters: 7 id: 2579 unit: void ShakerAddPlanCon() file: layer1/Shaker.cpp start line: 320 end line: 334 size: 14 LOC McCabe index: 1 number of parameters: 7 id: 2580 unit: void ObjectMakeValidName() file: layer1/PyMOLObject.cpp start line: 669 end line: 685 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2581 unit: void ObjectInit() file: layer1/PyMOLObject.cpp start line: 1251 end line: 1282 size: 14 LOC McCabe index: 1 number of parameters: 2 id: 2582 unit: void ObjectStateCombineMatrixTTT() file: layer1/PyMOLObject.cpp start line: 1357 end line: 1371 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2583 unit: int SceneDoXYPick() file: layer1/ScenePicking.cpp start line: 17 end line: 33 size: 14 LOC McCabe index: 4 number of parameters: 4 id: 2584 unit: int render_stereo_blend_into_full_screen() file: layer1/SceneRender.cpp start line: 71 end line: 84 size: 14 LOC McCabe index: 8 number of parameters: 1 id: 2585 unit: void GridGetGLViewport() file: layer1/SceneRender.cpp start line: 86 end line: 99 size: 14 LOC McCabe index: 1 number of parameters: 2 id: 2586 unit: int UtilCountStringVLA() file: layer0/Util.cpp start line: 54 end line: 67 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2587 unit: void UtilConcatVLA() file: layer0/Util.cpp start line: 92 end line: 106 size: 14 LOC McCabe index: 2 number of parameters: 3 id: 2588 unit: static int GetNewInfo() file: layer0/Tracker.cpp start line: 102 end line: 115 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2589 unit: static int GetNewMember() file: layer0/Tracker.cpp start line: 117 end line: 130 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2590 unit: int WordListMatch() file: layer0/Word.cpp start line: 654 end line: 667 size: 14 LOC McCabe index: 4 number of parameters: 4 id: 2591 unit: int p_glutCreateWindow() file: layer0/os_gl.cpp start line: 132 end line: 149 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2592 unit: void CShaderMgr::Check_Reload() file: layer0/ShaderMgr.cpp start line: 1578 end line: 1593 size: 14 LOC McCabe index: 5 number of parameters: 0 id: 2593 unit: void dump44f() file: layer0/Vector.cpp start line: 142 end line: 156 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2594 unit: bool is_allclosef() file: layer0/Vector.cpp start line: 365 end line: 378 size: 14 LOC McCabe index: 5 number of parameters: 6 id: 2595 unit: void normalize23f() file: layer0/Vector.cpp start line: 1670 end line: 1683 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 2596 unit: void normalize3d() file: layer0/Vector.cpp start line: 1701 end line: 1714 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2597 unit: void transform5f3f() file: layer0/Vector.cpp start line: 1824 end line: 1841 size: 14 LOC McCabe index: 1 number of parameters: 3 id: 2598 unit: void MapFree() file: layer0/Map.cpp start line: 38 end line: 51 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2599 unit: static int TriangleEdgeStatus() file: layer0/Triangle.cpp start line: 96 end line: 110 size: 14 LOC McCabe index: 5 number of parameters: 3 id: 2600 unit: static int IsosurfCurrent() file: layer0/Isosurf.cpp start line: 1042 end line: 1055 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2601 unit: void SphereFree() file: layer0/Sphere.cpp start line: 319 end line: 333 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2602 unit: static ov_word _GetCStringHash() file: ov/src/OVLexicon.cpp start line: 99 end line: 113 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2603 unit: static void HandleOutOfMemory() file: ov/src/OVHeap.cpp start line: 14 end line: 28 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2604 unit: static void HandleError() file: ov/src/OVHeap.cpp start line: 30 end line: 44 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2605 unit: int OVHeap_Usage() file: ov/src/OVHeap.cpp start line: 76 end line: 89 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2606 unit: void ChampPrepareTarget() file: contrib/champ/champ.c start line: 1158 end line: 1173 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2607 unit: int ChampMemoryUsage() file: contrib/champ/champ.c start line: 1711 end line: 1724 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2608 unit: int ChampBondToString() file: contrib/champ/champ.c start line: 4516 end line: 4530 size: 14 LOC McCabe index: 5 number of parameters: 3 id: 2609 unit: void feedback_Init() file: contrib/champ/feedback2.c start line: 17 end line: 36 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2610 unit: void feedback_SetMask() file: contrib/champ/feedback2.c start line: 73 end line: 86 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2611 unit: void feedback_Disable() file: contrib/champ/feedback2.c start line: 89 end line: 103 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2612 unit: void feedback_Enable() file: contrib/champ/feedback2.c start line: 105 end line: 119 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2613 unit: static int fio_win32convertfilename() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 54 end line: 70 size: 14 LOC McCabe index: 4 number of parameters: 3 id: 2614 unit: static int psf_start_block() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 259 end line: 279 size: 14 LOC McCabe index: 6 number of parameters: 2 id: 2615 unit: static void replace_wavefunction() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 490 end line: 503 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2616 unit: static void multmatrix() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 598 end line: 612 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2617 unit: void element_count_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 329 end line: 345 size: 14 LOC McCabe index: 2 number of parameters: 3 id: 2618 unit: void Timekeys::load() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 562 end line: 575 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2619 unit: static void close_bgf_read() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 622 end line: 635 size: 14 LOC McCabe index: 6 number of parameters: 1 id: 2620 unit: static int read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1208 end line: 1230 size: 14 LOC McCabe index: 8 number of parameters: 3 id: 2621 unit: static int binread() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1462 end line: 1477 size: 14 LOC McCabe index: 4 number of parameters: 4 id: 2622 unit: static int trx_rvector() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1339 end line: 1353 size: 14 LOC McCabe index: 9 number of parameters: 2 id: 2623 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h start line: 190 end line: 204 size: 14 LOC McCabe index: 2 number of parameters: 0 id: 2624 unit: static int read_geom_block() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 376 end line: 393 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2625 unit: static int read_molecular_orbitals() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1222 end line: 1253 size: 14 LOC McCabe index: 6 number of parameters: 1 id: 2626 unit: void set_box() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 696 end line: 709 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2627 unit: static int GetCartoonQuality() file: layer2/RepCartoon.cpp start line: 2435 end line: 2450 size: 14 LOC McCabe index: 6 number of parameters: 7 id: 2628 unit: static std::string make_mm_atom_site_label() file: layer2/CifMoleculeReader.cpp start line: 145 end line: 159 size: 14 LOC McCabe index: 1 number of parameters: 2 id: 2629 unit: int CoordSetMoveAtom() file: layer2/CoordSet.cpp start line: 600 end line: 615 size: 14 LOC McCabe index: 3 number of parameters: 4 id: 2630 unit: static char get_abbr() file: layer2/ObjectAlignment.cpp start line: 136 end line: 153 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2631 unit: int ObjectGadgetSetVertex() file: layer2/ObjectGadget.cpp start line: 52 end line: 65 size: 14 LOC McCabe index: 4 number of parameters: 4 id: 2632 unit: void ObjectGadgetInit() file: layer2/ObjectGadget.cpp start line: 470 end line: 485 size: 14 LOC McCabe index: 1 number of parameters: 2 id: 2633 unit: void immediate_draw_indexed_vertices() file: layer2/RepSurface.cpp start line: 171 end line: 184 size: 14 LOC McCabe index: 4 number of parameters: 5 id: 2634 unit: void GadgetSet::update() file: layer2/GadgetSet.cpp start line: 262 end line: 275 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 2635 unit: void AppendAtomVertex() file: layer2/HydrogenAdder.cpp start line: 20 end line: 36 size: 14 LOC McCabe index: 2 number of parameters: 3 id: 2636 unit: static int strstartswithword() file: layer2/ObjectMolecule2.cpp start line: 61 end line: 74 size: 14 LOC McCabe index: 8 number of parameters: 2 id: 2637 unit: void ObjectMoleculeInitHBondCriteria() file: layer2/ObjectMolecule2.cpp start line: 3239 end line: 3252 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 2638 unit: int ObjectMapStateValidXtal() file: layer2/ObjectMap.cpp start line: 105 end line: 121 size: 14 LOC McCabe index: 7 number of parameters: 1 id: 2639 unit: void ObjectMapStateClamp() file: layer2/ObjectMap.cpp start line: 1729 end line: 1743 size: 14 LOC McCabe index: 6 number of parameters: 3 id: 2640 unit: static int is_number() file: layer2/ObjectMap.cpp start line: 4874 end line: 4887 size: 14 LOC McCabe index: 10 number of parameters: 1 id: 2641 unit: int ObjectMapSetBorder() file: layer2/ObjectMap.cpp start line: 5606 end line: 5619 size: 14 LOC McCabe index: 7 number of parameters: 3 id: 2642 unit: PyMOLreturn_status PyMOL_CmdOrient() file: layer5/PyMOL.cpp start line: 814 end line: 827 size: 14 LOC McCabe index: 2 number of parameters: 7 id: 2643 unit: PyMOLreturn_status PyMOL_CmdDisable() file: layer5/PyMOL.cpp start line: 1006 end line: 1019 size: 14 LOC McCabe index: 3 number of parameters: 3 id: 2644 unit: PyMOLreturn_status PyMOL_CmdLoad() file: layer5/PyMOL.cpp start line: 1659 end line: 1672 size: 14 LOC McCabe index: 1 number of parameters: 11 id: 2645 unit: PyMOLreturn_status PyMOL_CmdLoadRaw() file: layer5/PyMOL.cpp start line: 1674 end line: 1687 size: 14 LOC McCabe index: 1 number of parameters: 11 id: 2646 unit: void PyMOL_StartWithPython() file: layer5/PyMOL.cpp start line: 2120 end line: 2143 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2647 unit: static void APIEnterBlocked() file: layer4/Cmd.cpp start line: 211 end line: 233 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2648 unit: int MaeExportGetAtomStyle() file: layer3/MaeExportHelpers.cpp start line: 61 end line: 78 size: 14 LOC McCabe index: 8 number of parameters: 2 id: 2649 unit: std::string MaeExportGetLabelUserText() file: layer3/MaeExportHelpers.cpp start line: 156 end line: 171 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2650 unit: static void SeekerBuildSeleFromAtomList() file: layer3/Seeker.cpp start line: 53 end line: 69 size: 14 LOC McCabe index: 2 number of parameters: 5 id: 2651 unit: def changePointColor() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2652 unit: def setColors() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2653 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2654 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2655 unit: def _get_assemblies() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2656 unit: inline Array1D Array1D::subarray() file: modules/cealign/src/tnt/tnt_array1d.h start line: 259 end line: 273 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2657 unit: void cdiv() file: modules/cealign/src/tnt/tnt_linalg.h start line: 649 end line: 662 size: 14 LOC McCabe index: 2 number of parameters: 4 id: 2658 unit: void getD() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1221 end line: 1234 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2659 unit: void cdiv() file: modules/cealign/src/tnt/jama_eig.h start line: 438 end line: 451 size: 14 LOC McCabe index: 2 number of parameters: 4 id: 2660 unit: void getD() file: modules/cealign/src/tnt/jama_eig.h start line: 1010 end line: 1023 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2661 unit: def split_tk_file_list() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2662 unit: def inc_fontsize_dialog() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2663 unit: def log_open() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2664 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2665 unit: def createBond() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 14 LOC McCabe index: 6 number of parameters: 1 id: 2666 unit: def set_rgb() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 3 id: 2667 unit: def canvas_add_peak() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 14 LOC McCabe index: 1 number of parameters: 3 id: 2668 unit: def onmouseup() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 2 id: 2669 unit: def selectdir() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2670 unit: def updateLabels() file: modules/pmg_tk/SetEditor.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2671 unit: def _ray_hash_spawn() file: modules/pymol/internal.py start line: 0 end line: 0 size: 14 LOC McCabe index: 6 number of parameters: 2 id: 2672 unit: def _coordset_update_spawn() file: modules/pymol/internal.py start line: 0 end line: 0 size: 14 LOC McCabe index: 6 number of parameters: 3 id: 2673 unit: def _object_update_spawn() file: modules/pymol/internal.py start line: 0 end line: 0 size: 14 LOC McCabe index: 6 number of parameters: 3 id: 2674 unit: def installPlugin() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2675 unit: def get_name_and_ext() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2676 unit: def update_preferences_item() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2677 unit: def filter_plugins() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 14 LOC McCabe index: 7 number of parameters: 1 id: 2678 unit: def confirm_network_access() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 2679 unit: def filter() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 14 LOC McCabe index: 8 number of parameters: 2 id: 2680 unit: def do_scene() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2681 unit: def ray_trace1() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 2682 unit: def update_map_menus() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2683 unit: def set_rep() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2684 unit: def update_dashes() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2685 unit: def __call__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2686 unit: def connectFontContextMenu() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 2687 unit: def guess_pymol_path() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 2688 unit: def simple() file: modules/pymol/preset.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2689 unit: def mat_prop() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2690 unit: def mol_color() file: modules/pymol/menu.py start line: 0 end line: 0 size: 14 LOC McCabe index: 1 number of parameters: 2 id: 2691 unit: def mesh_color() file: modules/pymol/menu.py start line: 0 end line: 0 size: 14 LOC McCabe index: 1 number of parameters: 3 id: 2692 unit: def simple_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 14 LOC McCabe index: 1 number of parameters: 2 id: 2693 unit: def parse_args() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2694 unit: def send_json_result() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 2695 unit: def send_json_error() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 3 id: 2696 unit: def lock() file: modules/pymol/locking.py start line: 0 end line: 0 size: 14 LOC McCabe index: 6 number of parameters: 1 id: 2697 unit: def zoom() file: modules/pymol/movie.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 6 id: 2698 unit: def get_energy_from_rec() file: modules/pymol/computing.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2699 unit: def get_restrain_positions() file: modules/chempy/tinker/keyword.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 4 id: 2700 unit: def convert_to_indexed() file: modules/chempy/models.py start line: 0 end line: 0 size: 14 LOC McCabe index: 5 number of parameters: 1 id: 2701 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 14 LOC McCabe index: 3 number of parameters: 1 id: 2702 unit: def standby() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 2703 unit: def _get() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 14 LOC McCabe index: 4 number of parameters: 2 id: 2704 unit: void BasisTrianglePrecompute() file: layer1/Basis.cpp start line: 3655 end line: 3670 size: 13 LOC McCabe index: 2 number of parameters: 4 id: 2705 unit: void TextSetOutlineColor() file: layer1/Text.cpp start line: 276 end line: 288 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2706 unit: void TextFree() file: layer1/Text.cpp start line: 738 end line: 750 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 2707 unit: bool TextStartsWithColorCode() file: layer1/Text.cpp start line: 774 end line: 788 size: 13 LOC McCabe index: 9 number of parameters: 1 id: 2708 unit: int PLockStatusAttempt() file: layer1/P.cpp start line: 954 end line: 966 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2709 unit: void PUnlockAPIAsGlut() file: layer1/P.cpp start line: 1421 end line: 1433 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2710 unit: void PUnlockAPIAsGlutNoFlush() file: layer1/P.cpp start line: 1435 end line: 1447 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2711 unit: void SceneGetWidthHeightStereo() file: layer1/Scene.cpp start line: 821 end line: 837 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2712 unit: void SceneSetCardInfo() file: layer1/Scene.cpp start line: 839 end line: 851 size: 13 LOC McCabe index: 4 number of parameters: 4 id: 2713 unit: void SceneGetImageSize() file: layer1/Scene.cpp start line: 1763 end line: 1778 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2714 unit: int SceneGetTwoSidedLightingSettings() file: layer1/Scene.cpp start line: 7025 end line: 7037 size: 13 LOC McCabe index: 4 number of parameters: 3 id: 2715 unit: int SettingSetGlobalsFromPyList() file: layer1/Setting.cpp start line: 884 end line: 902 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2716 unit: static int which_button() file: layer1/Control.cpp start line: 243 end line: 255 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2717 unit: void OrthoDrawBuffer() file: layer1/Ortho.cpp start line: 198 end line: 212 size: 13 LOC McCabe index: 6 number of parameters: 2 id: 2718 unit: int OrthoGetOverlayStatus() file: layer1/Ortho.cpp start line: 388 end line: 400 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 2719 unit: void OrthoCommandNest() file: layer1/Ortho.cpp start line: 420 end line: 432 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2720 unit: std::string OrthoFeedbackOut() file: layer1/Ortho.cpp start line: 485 end line: 498 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2721 unit: void WizardPurgeStack() file: layer1/Wizard.cpp start line: 126 end line: 138 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2722 unit: int PConvPyListToBitmask() file: layer1/PConv.cpp start line: 81 end line: 96 size: 13 LOC McCabe index: 4 number of parameters: 3 id: 2723 unit: void PConvInt2ToPyObjAttr() file: layer1/PConv.cpp start line: 484 end line: 497 size: 13 LOC McCabe index: 4 number of parameters: 3 id: 2724 unit: static void ColladaWriteVertices() file: layer1/COLLADA.cpp start line: 461 end line: 473 size: 13 LOC McCabe index: 1 number of parameters: 2 id: 2725 unit: int ObjectGetCurrentState() file: layer1/PyMOLObject.cpp start line: 687 end line: 705 size: 13 LOC McCabe index: 6 number of parameters: 2 id: 2726 unit: int ObjectGetTTT() file: layer1/PyMOLObject.cpp start line: 924 end line: 937 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2727 unit: void CMovie::reshape() file: layer1/Movie.cpp start line: 1952 end line: 1964 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2728 unit: std::vector strsplit() file: layer0/Util2.cpp start line: 20 end line: 36 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2729 unit: void UtilStripANSIEscapes() file: layer0/Util.cpp start line: 207 end line: 219 size: 13 LOC McCabe index: 8 number of parameters: 1 id: 2730 unit: int TrackerNewListCopy() file: layer0/Tracker.cpp start line: 250 end line: 262 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2731 unit: int TrackerGetCandRef() file: layer0/Tracker.cpp start line: 562 end line: 575 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2732 unit: void FeedbackSetMask() file: layer0/Feedback.cpp start line: 100 end line: 112 size: 13 LOC McCabe index: 5 number of parameters: 3 id: 2733 unit: void FeedbackDisable() file: layer0/Feedback.cpp start line: 114 end line: 127 size: 13 LOC McCabe index: 5 number of parameters: 3 id: 2734 unit: void FeedbackEnable() file: layer0/Feedback.cpp start line: 129 end line: 142 size: 13 LOC McCabe index: 5 number of parameters: 3 id: 2735 unit: void CShaderPrg::Set_Stereo_And_AnaglyphMode() file: layer0/ShaderPrg.cpp start line: 395 end line: 410 size: 13 LOC McCabe index: 5 number of parameters: 0 id: 2736 unit: void TextureGetPlacementForNewSubtexture() file: layer0/Texture.cpp start line: 256 end line: 268 size: 13 LOC McCabe index: 3 number of parameters: 5 id: 2737 unit: static string stringReplaceAll() file: layer0/ShaderMgr.cpp start line: 273 end line: 285 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2738 unit: bool is_diagonalf() file: layer0/Vector.cpp start line: 383 end line: 395 size: 13 LOC McCabe index: 6 number of parameters: 4 id: 2739 unit: static void normalize3dp() file: layer0/Vector.cpp start line: 1297 end line: 1309 size: 13 LOC McCabe index: 2 number of parameters: 3 id: 2740 unit: void multiply33f33f() file: layer0/Vector.cpp start line: 1492 end line: 1504 size: 13 LOC McCabe index: 2 number of parameters: 3 id: 2741 unit: void multiply33d33d() file: layer0/Vector.cpp start line: 1506 end line: 1518 size: 13 LOC McCabe index: 2 number of parameters: 3 id: 2742 unit: void bind() file: layer0/GenericBuffer.h start line: 474 end line: 486 size: 13 LOC McCabe index: 5 number of parameters: 2 id: 2743 unit: static int combine_lineage() file: contrib/champ/champ.c start line: 448 end line: 460 size: 13 LOC McCabe index: 3 number of parameters: 4 id: 2744 unit: void ChampMemoryDump() file: contrib/champ/champ.c start line: 1696 end line: 1709 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2745 unit: void ChampPatFree() file: contrib/champ/champ.c start line: 1772 end line: 1784 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2746 unit: void VLAFree() file: contrib/champ/vla.c start line: 92 end line: 104 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2747 unit: static int read_mdf_structure_line() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 66 end line: 84 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2748 unit: static int count_mdf_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 130 end line: 146 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2749 unit: static int fort_eat_recmark() file: contrib/uiuc/plugins/molfile_plugin/src/fortread.h start line: 36 end line: 49 size: 13 LOC McCabe index: 5 number of parameters: 2 id: 2750 unit: static int fortread_4() file: contrib/uiuc/plugins/molfile_plugin/src/fortread.h start line: 103 end line: 119 size: 13 LOC McCabe index: 10 number of parameters: 4 id: 2751 unit: static int read_parm7_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp start line: 125 end line: 137 size: 13 LOC McCabe index: 1 number of parameters: 8 id: 2752 unit: static void adjust_xbgf_field_string() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 122 end line: 136 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2753 unit: double time_of_day() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 2000 end line: 2015 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2754 unit: static int parse_parm7_mass() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h start line: 233 end line: 245 size: 13 LOC McCabe index: 4 number of parameters: 4 id: 2755 unit: void put_other_elements_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1216 end line: 1236 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 2756 unit: double time_of_day() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1188 end line: 1203 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2757 unit: static void adjust_bgf_field_string() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 98 end line: 112 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2758 unit: static void close_mol2_read() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 523 end line: 535 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2759 unit: static int read_structure() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1188 end line: 1204 size: 13 LOC McCabe index: 8 number of parameters: 3 id: 2760 unit: static void close_cube_read() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 560 end line: 574 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2761 unit: static int get_pqr_fields() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 128 end line: 149 size: 13 LOC McCabe index: 2 number of parameters: 11 id: 2762 unit: static void adjust_pdb_field_string() file: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h start line: 171 end line: 185 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2763 unit: void RepSphereFree() file: layer2/RepSphere.cpp start line: 62 end line: 74 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2764 unit: void RenderSphereComputeFog() file: layer2/RepSphere.cpp start line: 79 end line: 96 size: 13 LOC McCabe index: 1 number of parameters: 3 id: 2765 unit: int AtomInfoMatch() file: layer2/AtomInfo.cpp start line: 2191 end line: 2203 size: 13 LOC McCabe index: 8 number of parameters: 5 id: 2766 unit: int AtomInfoIsFreeCation() file: layer2/AtomInfo.cpp start line: 2205 end line: 2217 size: 13 LOC McCabe index: 7 number of parameters: 2 id: 2767 unit: bool ring_connector_visible() file: layer2/RepCartoon.cpp start line: 345 end line: 359 size: 13 LOC McCabe index: 4 number of parameters: 4 id: 2768 unit: int CartoonExtrudeTube() file: layer2/RepCartoon.cpp start line: 2262 end line: 2274 size: 13 LOC McCabe index: 4 number of parameters: 6 id: 2769 unit: int CartoonExtrudeOval() file: layer2/RepCartoon.cpp start line: 2336 end line: 2348 size: 13 LOC McCabe index: 4 number of parameters: 8 id: 2770 unit: int CartoonExtrudeArrow() file: layer2/RepCartoon.cpp start line: 2351 end line: 2368 size: 13 LOC McCabe index: 4 number of parameters: 7 id: 2771 unit: static void ObjectMeshStatePurge() file: layer2/ObjectMesh.cpp start line: 285 end line: 297 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2772 unit: static void ExtentRender() file: layer2/ObjectVolume.cpp start line: 655 end line: 667 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2773 unit: static bool is_sidechainhelper_hidden() file: layer2/RepEllipsoid.cpp start line: 130 end line: 144 size: 13 LOC McCabe index: 6 number of parameters: 2 id: 2774 unit: static void ObjectAlignmentFree() file: layer2/ObjectAlignment.cpp start line: 872 end line: 884 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2775 unit: static void ObjectGadgetRender() file: layer2/ObjectGadget.cpp start line: 453 end line: 466 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2776 unit: static void SurfaceJobPurgeResult() file: layer2/RepSurface.cpp start line: 2910 end line: 2922 size: 13 LOC McCabe index: 1 number of parameters: 2 id: 2777 unit: void RepRibbonFree() file: layer2/RepRibbon.cpp start line: 53 end line: 65 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2778 unit: void RepMeshFree() file: layer2/RepMesh.cpp start line: 65 end line: 77 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2779 unit: void RepNonbondedSphereFree() file: layer2/RepNonbondedSphere.cpp start line: 47 end line: 59 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2780 unit: void ObjectMapStateInit() file: layer2/ObjectMap.cpp start line: 2147 end line: 2159 size: 13 LOC McCabe index: 1 number of parameters: 2 id: 2781 unit: static bool isGuanidiniumCarbon() file: layer2/Mol2Typing.cpp start line: 18 end line: 32 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2782 unit: PyMOLreturn_status PyMOL_CmdEnable() file: layer5/PyMOL.cpp start line: 992 end line: 1004 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2783 unit: PyMOLreturn_int PyMOL_CmdGetMovieLength() file: layer5/PyMOL.cpp start line: 1180 end line: 1193 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2784 unit: PyMOLreturn_status PyMOL_CmdCreate() file: layer5/PyMOL.cpp start line: 1701 end line: 1713 size: 13 LOC McCabe index: 1 number of parameters: 11 id: 2785 unit: PyMOLreturn_int_array PyMOL_GetRepsInSceneForObject() file: layer5/PyMOL.cpp start line: 3227 end line: 3239 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2786 unit: PyMOLreturn_int_array PyMOL_GetRepsForObject() file: layer5/PyMOL.cpp start line: 3241 end line: 3253 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2787 unit: static void MainInit() file: layer5/main.cpp start line: 1024 end line: 1045 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2788 unit: void SeleCoordIterator::init() file: layer3/AtomIterators.cpp start line: 76 end line: 93 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2789 unit: virtual void init() file: layer3/MoleculeExporter.cpp start line: 155 end line: 170 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2790 unit: void beginCoordSet() file: layer3/MoleculeExporter.cpp start line: 526 end line: 540 size: 13 LOC McCabe index: 5 number of parameters: 0 id: 2791 unit: void packMsgpack() file: layer3/MoleculeExporter.cpp start line: 1361 end line: 1375 size: 13 LOC McCabe index: 1 number of parameters: 0 id: 2792 unit: int PlugIOManagerRegister() file: layer3/PlugIOManager.cpp start line: 129 end line: 142 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2793 unit: def edit_pymolrc() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 13 LOC McCabe index: 5 number of parameters: 1 id: 2794 unit: def update_feedback() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2795 unit: def _copy_image() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2796 unit: def activateOrDismiss() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 13 LOC McCabe index: 5 number of parameters: 1 id: 2797 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2798 unit: def attach() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2799 unit: def _get_chains() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 2800 unit: def textformat() file: modules/pmg_qt/syntax/__init__.py start line: 0 end line: 0 size: 13 LOC McCabe index: 5 number of parameters: 2 id: 2801 unit: def get_modifiers() file: modules/pmg_qt/keymapping.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2802 unit: Matrix add() file: modules/cealign/src/tnt/tnt_matrix.h start line: 797 end line: 813 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2803 unit: Matrix minus() file: modules/cealign/src/tnt/tnt_matrix.h start line: 889 end line: 906 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2804 unit: Matrix mult_element() file: modules/cealign/src/tnt/tnt_matrix.h start line: 938 end line: 954 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 2805 unit: inline double norm() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 212 end line: 224 size: 13 LOC McCabe index: 3 number of parameters: 0 id: 2806 unit: Matrix getU() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1411 end line: 1423 size: 13 LOC McCabe index: 4 number of parameters: 0 id: 2807 unit: Array2D getU() file: modules/cealign/src/tnt/jama_lu.h start line: 187 end line: 199 size: 13 LOC McCabe index: 4 number of parameters: 0 id: 2808 unit: def _edit_pymolrc() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2809 unit: def get_view() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 2810 unit: def activateOrDismiss() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 13 LOC McCabe index: 5 number of parameters: 1 id: 2811 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2812 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 6 id: 2813 unit: def getAtoms() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 13 LOC McCabe index: 5 number of parameters: 2 id: 2814 unit: def update() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 2815 unit: def __init__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 13 LOC McCabe index: 1 number of parameters: 4 id: 2816 unit: def initOS() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 2817 unit: def my_show() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 3 id: 2818 unit: def setSkin() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 3 id: 2819 unit: def updateRamp() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2820 unit: def onSet() file: modules/pmg_tk/SetEditor.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 3 id: 2821 unit: def _get_feedback() file: modules/pymol/internal.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2822 unit: def _deferred_init_pymol_internals() file: modules/pymol/cmd.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2823 unit: def get_panel() file: modules/pymol/wizard/toggle.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 2824 unit: def do_key() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 13 LOC McCabe index: 8 number of parameters: 5 id: 2825 unit: def get_name() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 3 id: 2826 unit: def __init__() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2827 unit: def count_object() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2828 unit: def cgo() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2829 unit: def flatlist() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 2830 unit: def preset_ligand_sites() file: modules/pymol/menu.py start line: 0 end line: 0 size: 13 LOC McCabe index: 1 number of parameters: 2 id: 2831 unit: def symmetry() file: modules/pymol/menu.py start line: 0 end line: 0 size: 13 LOC McCabe index: 1 number of parameters: 2 id: 2832 unit: def selection() file: modules/pymol/menu.py start line: 0 end line: 0 size: 13 LOC McCabe index: 1 number of parameters: 2 id: 2833 unit: def mat_tran() file: modules/pymol/menu.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 3 id: 2834 unit: def pymol_getattr() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 2835 unit: def get_personal_folder() file: modules/pymol/invocation.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 0 id: 2836 unit: def label2() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2837 unit: def get_color_tuple() file: modules/pymol/querying.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 3 id: 2838 unit: def implicit_mass() file: modules/chempy/mass.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 2839 unit: def __init__() file: modules/chempy/neighbor.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 2840 unit: def get_inactive() file: modules/chempy/tinker/keyword.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2841 unit: def bmin() file: modules/chempy/bmin/commands.py start line: 0 end line: 0 size: 13 LOC McCabe index: 1 number of parameters: 5 id: 2842 unit: def minimize() file: modules/chempy/bmin/state.py start line: 0 end line: 0 size: 13 LOC McCabe index: 3 number of parameters: 6 id: 2843 unit: def toList() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2844 unit: def save_str() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 2845 unit: def _remote_call() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 13 LOC McCabe index: 2 number of parameters: 4 id: 2846 unit: def server_bind() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 13 LOC McCabe index: 6 number of parameters: 1 id: 2847 unit: def handle() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 13 LOC McCabe index: 5 number of parameters: 1 id: 2848 unit: void TextDrawSubStrFast() file: layer1/Text.cpp start line: 215 end line: 226 size: 12 LOC McCabe index: 4 number of parameters: 6 id: 2849 unit: static int label_copy_text() file: layer1/P.cpp start line: 65 end line: 76 size: 12 LOC McCabe index: 3 number of parameters: 4 id: 2850 unit: int PTruthCallStr0() file: layer1/P.cpp start line: 1040 end line: 1051 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2851 unit: int PTruthCallStr() file: layer1/P.cpp start line: 1053 end line: 1064 size: 12 LOC McCabe index: 3 number of parameters: 3 id: 2852 unit: int PTruthCallStr1i() file: layer1/P.cpp start line: 1066 end line: 1077 size: 12 LOC McCabe index: 3 number of parameters: 3 id: 2853 unit: int PTruthCallStr1s() file: layer1/P.cpp start line: 1079 end line: 1090 size: 12 LOC McCabe index: 3 number of parameters: 3 id: 2854 unit: int PTruthCallStr4i() file: layer1/P.cpp start line: 1092 end line: 1103 size: 12 LOC McCabe index: 3 number of parameters: 6 id: 2855 unit: void SceneDirty() file: layer1/Scene.cpp start line: 2097 end line: 2116 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2856 unit: void SceneGetResetNormal() file: layer1/Scene.cpp start line: 6091 end line: 6102 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 2857 unit: float SceneGetSpecularValue() file: layer1/Scene.cpp start line: 6602 end line: 6613 size: 12 LOC McCabe index: 6 number of parameters: 3 id: 2858 unit: void SceneSetupGLPicking() file: layer1/Scene.cpp start line: 6864 end line: 6877 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2859 unit: void SceneGetScaledAxesAtPoint() file: layer1/Scene.cpp start line: 7193 end line: 7206 size: 12 LOC McCabe index: 1 number of parameters: 4 id: 2860 unit: int SettingSetSmart_i() file: layer1/Setting.cpp start line: 871 end line: 882 size: 12 LOC McCabe index: 5 number of parameters: 5 id: 2861 unit: void SettingPurge() file: layer1/Setting.cpp start line: 1466 end line: 1479 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 2862 unit: bool SettingIsDefaultZero() file: layer1/Setting.cpp start line: 1504 end line: 1516 size: 12 LOC McCabe index: 5 number of parameters: 1 id: 2863 unit: int SettingUnset() file: layer1/Setting.cpp start line: 1569 end line: 1580 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2864 unit: bool CPyMOLInitSetting() file: layer1/Setting.cpp start line: 3128 end line: 3143 size: 12 LOC McCabe index: 5 number of parameters: 2 id: 2865 unit: void RayPopTTT() file: layer1/Ray.cpp start line: 7714 end line: 7725 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2866 unit: void ViewElemArrayPurge() file: layer1/View.cpp start line: 319 end line: 330 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 2867 unit: void CControl::reshape() file: layer1/Control.cpp start line: 226 end line: 241 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2868 unit: void OrthoKeyAlt() file: layer1/Ortho.cpp start line: 809 end line: 827 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 2869 unit: static void draw_text() file: layer1/Wizard.cpp start line: 822 end line: 833 size: 12 LOC McCabe index: 3 number of parameters: 5 id: 2870 unit: int PConvPyStrToStrPtr() file: layer1/PConv.cpp start line: 248 end line: 259 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 2871 unit: int PConvPyFloatToFloat() file: layer1/PConv.cpp start line: 295 end line: 306 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2872 unit: void ShakerAddDistCon() file: layer1/Shaker.cpp start line: 56 end line: 68 size: 12 LOC McCabe index: 1 number of parameters: 6 id: 2873 unit: void ShakerAddTorsCon() file: layer1/Shaker.cpp start line: 305 end line: 318 size: 12 LOC McCabe index: 1 number of parameters: 6 id: 2874 unit: void ObjectStateRightCombineMatrixR44d() file: layer1/PyMOLObject.cpp start line: 1331 end line: 1342 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2875 unit: void ObjectStateLeftCombineMatrixR44d() file: layer1/PyMOLObject.cpp start line: 1344 end line: 1355 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2876 unit: void ObjectStateTransformMatrix() file: layer1/PyMOLObject.cpp start line: 1390 end line: 1401 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2877 unit: int MovieFrameToImage() file: layer1/Movie.cpp start line: 1025 end line: 1036 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 2878 unit: void MovieSetImage() file: layer1/Movie.cpp start line: 1056 end line: 1069 size: 12 LOC McCabe index: 3 number of parameters: 3 id: 2879 unit: void MovieReset() file: layer1/Movie.cpp start line: 1526 end line: 1539 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 2880 unit: void GLAPIENTRY gl_debug_proc() file: layer0/GraphicsUtil.cpp start line: 70 end line: 81 size: 12 LOC McCabe index: 1 number of parameters: 7 id: 2881 unit: int UtilShouldWePrintQuantity() file: layer0/Util.cpp start line: 42 end line: 53 size: 12 LOC McCabe index: 5 number of parameters: 1 id: 2882 unit: double UtilGetSeconds() file: layer0/Util.cpp start line: 69 end line: 82 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 2883 unit: void UtilNCopy() file: layer0/Util.cpp start line: 150 end line: 161 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 2884 unit: void UtilNCopyToLower() file: layer0/Util.cpp start line: 163 end line: 174 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 2885 unit: static int GetUniqueValidID() file: layer0/Tracker.cpp start line: 145 end line: 157 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 2886 unit: int WordListIterate() file: layer0/Word.cpp start line: 641 end line: 652 size: 12 LOC McCabe index: 3 number of parameters: 4 id: 2887 unit: void FeedbackPush() file: layer0/Feedback.cpp start line: 77 end line: 88 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2888 unit: void Block::drawTopEdge() file: layer0/Block.cpp start line: 83 end line: 94 size: 12 LOC McCabe index: 3 number of parameters: 0 id: 2889 unit: bool Block::recursiveFastDraw() file: layer0/Block.cpp start line: 138 end line: 149 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 2890 unit: void CShaderPrg::ErrorMsgWithShaderInfoLog() file: layer0/ShaderMgr.cpp start line: 661 end line: 675 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2891 unit: void CShaderMgr::AddVBOToFree() file: layer0/ShaderMgr.cpp start line: 1011 end line: 1022 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2892 unit: void CShaderMgr::freeAllGPUBuffers() file: layer0/ShaderMgr.cpp start line: 1758 end line: 1769 size: 12 LOC McCabe index: 4 number of parameters: 0 id: 2893 unit: void identity33f() file: layer0/Vector.cpp start line: 302 end line: 313 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 2894 unit: void identity33d() file: layer0/Vector.cpp start line: 315 end line: 326 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 2895 unit: void transpose33f33f() file: layer0/Vector.cpp start line: 629 end line: 640 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 2896 unit: void transpose33d33d() file: layer0/Vector.cpp start line: 642 end line: 653 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 2897 unit: void normalize2f() file: layer0/Vector.cpp start line: 1716 end line: 1727 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2898 unit: bool freeBuffers() file: layer0/GenericBuffer.h start line: 224 end line: 235 size: 12 LOC McCabe index: 4 number of parameters: 0 id: 2899 unit: bool sepBufferData() file: layer0/GenericBuffer.h start line: 314 end line: 327 size: 12 LOC McCabe index: 6 number of parameters: 0 id: 2900 unit: bool genBuffer() file: layer0/GenericBuffer.h start line: 421 end line: 432 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 2901 unit: static int IsosurfPoints() file: layer0/Isosurf.cpp start line: 1059 end line: 1070 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 2902 unit: __inline__ static void inline_normalize3f() file: layer0/Vector.h start line: 425 end line: 436 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2903 unit: void OVLexicon_Del() file: ov/src/OVLexicon.cpp start line: 50 end line: 61 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2904 unit: static int PTruthCallStr() file: contrib/champ/champ.c start line: 1183 end line: 1194 size: 12 LOC McCabe index: 3 number of parameters: 3 id: 2905 unit: void ChampAtomFreeChain() file: contrib/champ/champ.c start line: 1796 end line: 1807 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2906 unit: void ChampBondFreeChain() file: contrib/champ/champ.c start line: 1819 end line: 1830 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2907 unit: void feedback_Push() file: contrib/champ/feedback2.c start line: 50 end line: 61 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2908 unit: int ChiralHandedness() file: contrib/champ/chiral.c start line: 57 end line: 70 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 2909 unit: static void close_pdb_read() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 286 end line: 297 size: 12 LOC McCabe index: 5 number of parameters: 1 id: 2910 unit: float situs_voxel_value_interpolate_from_coord() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 228 end line: 241 size: 12 LOC McCabe index: 4 number of parameters: 11 id: 2911 unit: static void del_wavefunction() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 507 end line: 518 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2912 unit: static void eatwhitelines() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 846 end line: 857 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2913 unit: static void thisline() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 1077 end line: 1088 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2914 unit: void modify_rule_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 3005 end line: 3021 size: 12 LOC McCabe index: 3 number of parameters: 3 id: 2915 unit: static int setCoordinatesFast() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 778 end line: 789 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 2916 unit: void Timekeys::dump() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 549 end line: 560 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2917 unit: static int trx_int() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1279 end line: 1294 size: 12 LOC McCabe index: 7 number of parameters: 2 id: 2918 unit: static int xtc_int() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1517 end line: 1532 size: 12 LOC McCabe index: 7 number of parameters: 2 id: 2919 unit: float edm_voxel_value_interpolate_from_coord() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 324 end line: 343 size: 12 LOC McCabe index: 4 number of parameters: 11 id: 2920 unit: virtual void insert_row() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 950 end line: 961 size: 12 LOC McCabe index: 5 number of parameters: 1 id: 2921 unit: int64_t MMTF_parser_fetch_int() file: contrib/mmtf-c/mmtf_parser.cpp start line: 784 end line: 797 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2922 unit: float MMTF_parser_fetch_float() file: contrib/mmtf-c/mmtf_parser.cpp start line: 799 end line: 810 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2923 unit: void MMTF_parser_put_group() file: contrib/mmtf-c/mmtf_parser.cpp start line: 879 end line: 890 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 2924 unit: def guess_msgpackc() file: setup.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 0 id: 2925 unit: static float SphereComputeCutMultiplier() file: layer2/RepSphere.cpp start line: 335 end line: 346 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2926 unit: void AtomInfoBondCopy() file: layer2/AtomInfo.cpp start line: 1057 end line: 1069 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 2927 unit: int ObjectMeshAllMapsInStatesExist() file: layer2/ObjectMesh.cpp start line: 89 end line: 100 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 2928 unit: int CoordSetSetSettingFromPyObject() file: layer2/CoordSet.cpp start line: 1729 end line: 1743 size: 12 LOC McCabe index: 5 number of parameters: 5 id: 2929 unit: int CoordSetCheckUniqueID() file: layer2/CoordSet.cpp start line: 1765 end line: 1776 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 2930 unit: int ObjectGadgetGetVertex() file: layer2/ObjectGadget.cpp start line: 39 end line: 50 size: 12 LOC McCabe index: 3 number of parameters: 4 id: 2931 unit: static void ObjectSurfaceStateFree() file: layer2/ObjectSurface.cpp start line: 225 end line: 237 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 2932 unit: static void ObjectCGOUpdate() file: layer2/ObjectCGO.cpp start line: 237 end line: 248 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2933 unit: static bool checkFrozenState() file: layer2/ObjectDist.cpp start line: 530 end line: 544 size: 12 LOC McCabe index: 5 number of parameters: 3 id: 2934 unit: void ObjectDistFree() file: layer2/ObjectDist.cpp start line: 839 end line: 850 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2935 unit: double scifloat() file: layer2/CifFile.cpp start line: 27 end line: 38 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2936 unit: int GadgetSetGetExtent() file: layer2/GadgetSet.cpp start line: 206 end line: 217 size: 12 LOC McCabe index: 2 number of parameters: 3 id: 2937 unit: static void addXYZtoVertex() file: layer2/RepLabel.cpp start line: 159 end line: 170 size: 12 LOC McCabe index: 1 number of parameters: 8 id: 2938 unit: int VFontInit() file: layer2/VFont.cpp start line: 264 end line: 276 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2939 unit: int SculptCacheInit() file: layer2/SculptCache.cpp start line: 41 end line: 52 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2940 unit: int ObjectMapSetMatrix() file: layer2/ObjectMap.cpp start line: 202 end line: 215 size: 12 LOC McCabe index: 3 number of parameters: 3 id: 2941 unit: static int sulfurCountOxygenNeighbors() file: layer2/Mol2Typing.cpp start line: 100 end line: 113 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2942 unit: PyMOLreturn_status PyMOL_CmdSelectList() file: layer5/PyMOL.cpp start line: 934 end line: 945 size: 12 LOC McCabe index: 2 number of parameters: 8 id: 2943 unit: PyMOLreturn_value PyMOL_GetVersion() file: layer5/PyMOL.cpp start line: 3426 end line: 3438 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2944 unit: void MainOnExit() file: layer5/main.cpp start line: 371 end line: 391 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2945 unit: BOOL WINAPI HandlerRoutine() file: layer5/main.cpp start line: 1412 end line: 1424 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 2946 unit: static void PopUpRecursiveDetach() file: layer4/PopUp.cpp start line: 355 end line: 366 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2947 unit: static void PopUpRecursiveFree() file: layer4/PopUp.cpp start line: 394 end line: 407 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2948 unit: int SeekerInit() file: layer3/Seeker.cpp start line: 2173 end line: 2185 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2949 unit: void EditorUpdate() file: layer3/Editor.cpp start line: 288 end line: 299 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2950 unit: void MoleculeExporter::updateMatrix() file: layer3/MoleculeExporter.cpp start line: 387 end line: 398 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2951 unit: void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 947 end line: 963 size: 12 LOC McCabe index: 1 number of parameters: 0 id: 2952 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 1344 end line: 1359 size: 12 LOC McCabe index: 2 number of parameters: 0 id: 2953 unit: def set_parallel_jobs() file: monkeypatch_distutils.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2954 unit: def monkeypatch() file: monkeypatch_distutils.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 2955 unit: def toggle_ext_window_dockable() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2956 unit: def initializePlugins() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 2957 unit: def _getfilter() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 2 id: 2958 unit: def setPointColor() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 3 id: 2959 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2960 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2961 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2962 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2963 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2964 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2965 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2966 unit: def do_more() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 2 id: 2967 unit: def getIcons() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2968 unit: int rank() file: modules/cealign/src/tnt/jama_svd.h start line: 522 end line: 533 size: 12 LOC McCabe index: 3 number of parameters: 0 id: 2969 unit: inline Matrix mult() file: modules/cealign/src/tnt/tnt_matrix.h start line: 541 end line: 569 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 2970 unit: Vector upper_triangular_solve() file: modules/cealign/src/tnt/tnt_matrix.h start line: 1052 end line: 1064 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 2971 unit: Vector lower_triangular_solve() file: modules/cealign/src/tnt/tnt_matrix.h start line: 1078 end line: 1090 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 2972 unit: int rank() file: modules/cealign/src/tnt/tnt_linalg.h start line: 2351 end line: 2362 size: 12 LOC McCabe index: 3 number of parameters: 0 id: 2973 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2974 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2975 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2976 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2977 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2978 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2979 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2980 unit: def do_more() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 2 id: 2981 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 2982 unit: def pick_color() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 2983 unit: def __init__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 5 id: 2984 unit: def plot_colorline() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2985 unit: def askfilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 3 id: 2986 unit: def updateMolSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2987 unit: def _ray_anti_spawn() file: modules/pymol/internal.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 2988 unit: def _ray_spawn() file: modules/pymol/internal.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 2989 unit: def recent_filenames_add() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 2990 unit: def translate_atom() file: modules/pymol/editing.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 8 id: 2991 unit: def ep_mouse_down() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 9 id: 2992 unit: def ep_motion() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 9 id: 2993 unit: def OnMouseMotion() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 2994 unit: def _eval_func() file: modules/pymol/importing.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 2995 unit: def __getattr__() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 2996 unit: def is_writable() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 2997 unit: def copy() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 3 id: 2998 unit: def __init__() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 2 id: 2999 unit: def color_objs() file: modules/pymol/util.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 3000 unit: def colors() file: modules/pymol/util.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 3001 unit: def clear() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 3002 unit: def __init__() file: modules/pymol/wizard/message.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 3 id: 3003 unit: def __init__() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 3004 unit: def get_prompt() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 12 LOC McCabe index: 6 number of parameters: 1 id: 3005 unit: def cleanup() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 3006 unit: def do_pick() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 3007 unit: def clear() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 3008 unit: def do_pick() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 3009 unit: def getMonospaceFont() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 1 id: 3010 unit: def get_version_message() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 3011 unit: def _launch_no_gui() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 12 LOC McCabe index: 7 number of parameters: 0 id: 3012 unit: def get_sname_oname_dname() file: modules/pymol/preset.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 3013 unit: def default() file: modules/pymol/preset.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 3014 unit: def by_elem2() file: modules/pymol/menu.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 3015 unit: def by_elem3() file: modules/pymol/menu.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 3016 unit: def by_elem4() file: modules/pymol/menu.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 3017 unit: def all_colors_generic() file: modules/pymol/menu.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 3018 unit: def color_auto() file: modules/pymol/menu.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 3019 unit: def restrict() file: modules/pymol/menu.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 2 id: 3020 unit: def load() file: modules/pymol/movie.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 3021 unit: def auto_measure() file: modules/pymol/querying.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 1 id: 3022 unit: def get_color_indices() file: modules/pymol/querying.py start line: 0 end line: 0 size: 12 LOC McCabe index: 3 number of parameters: 2 id: 3023 unit: def merge() file: modules/chempy/models.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 2 id: 3024 unit: def nxt_tok() file: modules/chempy/mae.py start line: 0 end line: 0 size: 12 LOC McCabe index: 5 number of parameters: 1 id: 3025 unit: def my_open() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 12 LOC McCabe index: 7 number of parameters: 3 id: 3026 unit: def random_displacement() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 2 id: 3027 unit: def unquote() file: modules/chempy/cif.py start line: 0 end line: 0 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 3028 unit: def get_ordered_data_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 3029 unit: def get_zmat_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 12 LOC McCabe index: 4 number of parameters: 4 id: 3030 unit: def shutdown() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 12 LOC McCabe index: 1 number of parameters: 1 id: 3031 unit: void TextSetLabelBkgrdInfo() file: layer1/Text.cpp start line: 83 end line: 93 size: 11 LOC McCabe index: 2 number of parameters: 4 id: 3032 unit: void PGetOptions() file: layer1/P.cpp start line: 2077 end line: 2089 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3033 unit: void PSGIStereo() file: layer1/P.cpp start line: 2337 end line: 2347 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3034 unit: void SceneRovingPostpone() file: layer1/Scene.cpp start line: 2118 end line: 2128 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3035 unit: float ScenePushRasterMatrix() file: layer1/Scene.cpp start line: 4386 end line: 4396 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3036 unit: float SceneGetRawDepth() file: layer1/Scene.cpp start line: 4448 end line: 4461 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3037 unit: inline bool type_upcast() file: layer1/Setting.cpp start line: 204 end line: 214 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3038 unit: static int SettingUniqueEntry_IsSame() file: layer1/Setting.cpp start line: 288 end line: 298 size: 11 LOC McCabe index: 5 number of parameters: 3 id: 3039 unit: void SettingFreeGlobal() file: layer1/Setting.cpp start line: 2945 end line: 2955 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3040 unit: int ScrollBar::drag() file: layer1/ScrollBar.cpp start line: 320 end line: 330 size: 11 LOC McCabe index: 2 number of parameters: 3 id: 3041 unit: int TriangleReverse() file: layer1/Ray.cpp start line: 1237 end line: 1249 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3042 unit: int SeqGetHeight() file: layer1/Seq.cpp start line: 223 end line: 234 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3043 unit: int ColorGetCurrent() file: layer1/Color.cpp start line: 159 end line: 169 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3044 unit: bool ColorGetCheckRamped() file: layer1/Color.cpp start line: 241 end line: 251 size: 11 LOC McCabe index: 2 number of parameters: 5 id: 3045 unit: void OrthoClear() file: layer1/Ortho.cpp start line: 460 end line: 470 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3046 unit: void OrthoInvalidateBackgroundTexture() file: layer1/Ortho.cpp start line: 1286 end line: 1296 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3047 unit: int PConvCObjectToPtr() file: layer1/PConv.cpp start line: 212 end line: 222 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3048 unit: static int GetFloatPositionInArray() file: layer1/COLLADA.cpp start line: 67 end line: 77 size: 11 LOC McCabe index: 3 number of parameters: 4 id: 3049 unit: void ObjectMotionReinterpolate() file: layer1/PyMOLObject.cpp start line: 66 end line: 83 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3050 unit: void ObjectStateCopy() file: layer1/PyMOLObject.cpp start line: 1292 end line: 1305 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3051 unit: void MovieViewReinterpolate() file: layer1/Movie.cpp start line: 112 end line: 123 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3052 unit: void MovieCopyFinish() file: layer1/Movie.cpp start line: 416 end line: 426 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3053 unit: static int stereo_via_stencil() file: layer1/SceneRender.cpp start line: 58 end line: 68 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3054 unit: bool glCheckOkay() file: layer0/GraphicsUtil.cpp start line: 36 end line: 46 size: 11 LOC McCabe index: 2 number of parameters: 0 id: 3055 unit: int TrackerGetNListForCand() file: layer0/Tracker.cpp start line: 577 end line: 588 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3056 unit: int TrackerGetNCandForList() file: layer0/Tracker.cpp start line: 590 end line: 601 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3057 unit: int ParseFloat3List() file: layer0/Parse.cpp start line: 152 end line: 168 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3058 unit: void WordMatchOptionsConfigAlphaList() file: layer0/Word.cpp start line: 120 end line: 130 size: 11 LOC McCabe index: 2 number of parameters: 3 id: 3059 unit: int CShaderPrg::GetUniformLocation() file: layer0/ShaderPrg.cpp start line: 213 end line: 225 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3060 unit: int TextureInit() file: layer0/Texture.cpp start line: 64 end line: 76 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3061 unit: void TextureInvalidateTextTexture() file: layer0/Texture.cpp start line: 82 end line: 92 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3062 unit: int PyMOLCheckOpenGLErr() file: layer0/os_gl.cpp start line: 94 end line: 104 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3063 unit: void CShaderMgr::Reload_All_Shaders() file: layer0/ShaderMgr.cpp start line: 349 end line: 361 size: 11 LOC McCabe index: 4 number of parameters: 0 id: 3064 unit: void CShaderMgr::CollectDependantFileNames() file: layer0/ShaderMgr.cpp start line: 1616 end line: 1626 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3065 unit: void CShaderMgr::bindOffscreenOITTexture() file: layer0/ShaderMgr.cpp start line: 1914 end line: 1924 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3066 unit: void dump44d() file: layer0/Vector.cpp start line: 158 end line: 168 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3067 unit: void transform44f4f() file: layer0/Vector.cpp start line: 803 end line: 813 size: 11 LOC McCabe index: 1 number of parameters: 3 id: 3068 unit: float smooth() file: layer0/Vector.cpp start line: 2130 end line: 2141 size: 11 LOC McCabe index: 4 number of parameters: 2 id: 3069 unit: void subdivide() file: layer0/Vector.cpp start line: 2144 end line: 2154 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 3070 unit: void OVContext_Del() file: ov/src/OVContext.cpp start line: 18 end line: 28 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3071 unit: OVreturn_size OVOneToAny_GetSize() file: ov/src/OVOneToAny.cpp start line: 267 end line: 277 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3072 unit: OVreturn_size OVOneToOne_GetSize() file: ov/src/OVOneToOne.cpp start line: 324 end line: 334 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3073 unit: void ListElemFree() file: contrib/champ/list.c start line: 256 end line: 266 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3074 unit: static int get_runtitle() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1445 end line: 1462 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3075 unit: static fio_size_t fio_readv() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 151 end line: 163 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 3076 unit: static fio_size_t fio_readv() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 297 end line: 309 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 3077 unit: static int write_bonds() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 973 end line: 986 size: 11 LOC McCabe index: 1 number of parameters: 8 id: 3078 unit: static void multpoint3d() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 667 end line: 677 size: 11 LOC McCabe index: 1 number of parameters: 3 id: 3079 unit: static int hash() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 42 end line: 55 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3080 unit: static float alos() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 259 end line: 272 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3081 unit: int get_prop_type() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2275 end line: 2291 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3082 unit: void copy_property() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2391 end line: 2402 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3083 unit: static float alos_int() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 256 end line: 269 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3084 unit: void get_float() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 606 end line: 616 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3085 unit: void get_double() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 617 end line: 627 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3086 unit: uint64_t typename_size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1776 end line: 1787 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3087 unit: void write_all() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1924 end line: 1934 size: 11 LOC McCabe index: 4 number of parameters: 3 id: 3088 unit: int main() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2369 end line: 2383 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3089 unit: static int vmd_file_is_executable() file: contrib/uiuc/plugins/molfile_plugin/src/vmddir.h start line: 145 end line: 155 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3090 unit: static void abinit_plugindata_free() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 196 end line: 209 size: 11 LOC McCabe index: 6 number of parameters: 1 id: 3091 unit: static int read_timestep_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c start line: 128 end line: 139 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3092 unit: static int shelltype_int() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1080 end line: 1091 size: 11 LOC McCabe index: 7 number of parameters: 1 id: 3093 unit: static void vasp_plugindata_free() file: contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h start line: 64 end line: 75 size: 11 LOC McCabe index: 7 number of parameters: 1 id: 3094 unit: virtual void insert_row() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 920 end line: 930 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3095 unit: int AtomInfoSetSettingFromPyObject() file: layer2/AtomInfo.cpp start line: 72 end line: 85 size: 11 LOC McCabe index: 4 number of parameters: 4 id: 3096 unit: void AtomInfoPurgeBond() file: layer2/AtomInfo.cpp start line: 1071 end line: 1081 size: 11 LOC McCabe index: 5 number of parameters: 2 id: 3097 unit: int AtomInfoSameResidue() file: layer2/AtomInfo.cpp start line: 2114 end line: 2124 size: 11 LOC McCabe index: 7 number of parameters: 3 id: 3098 unit: static void set_protons() file: layer2/AtomInfo.cpp start line: 2386 end line: 2400 size: 11 LOC McCabe index: 5 number of parameters: 2 id: 3099 unit: void AtomInfoSetStereo() file: layer2/AtomInfo.cpp start line: 2836 end line: 2846 size: 11 LOC McCabe index: 8 number of parameters: 2 id: 3100 unit: static int bondOrderLookup() file: layer2/CifMoleculeReader.cpp start line: 299 end line: 310 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3101 unit: static void ObjectMeshFree() file: layer2/ObjectMesh.cpp start line: 308 end line: 319 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3102 unit: void RepSphere_Generate_Impostor_Spheres() file: layer2/RepSphereGenerate.cpp start line: 63 end line: 73 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 3103 unit: void RepSphere_Generate_ARB_Spheres() file: layer2/RepSphereGenerate.cpp start line: 76 end line: 87 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 3104 unit: int CoordSetCheckSetting() file: layer2/CoordSet.cpp start line: 1746 end line: 1756 size: 11 LOC McCabe index: 4 number of parameters: 4 id: 3105 unit: void ObjectGadgetPurge() file: layer2/ObjectGadget.cpp start line: 401 end line: 412 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3106 unit: static void ObjectSurfaceFree() file: layer2/ObjectSurface.cpp start line: 239 end line: 250 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3107 unit: void ObjectCGOFree() file: layer2/ObjectCGO.cpp start line: 160 end line: 170 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3108 unit: static void ObjectSliceFree() file: layer2/ObjectSlice.cpp start line: 213 end line: 224 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3109 unit: void SculptFree() file: layer2/Sculpt.cpp start line: 2428 end line: 2439 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3110 unit: static void ObjectMapFree() file: layer2/ObjectMap.cpp start line: 1794 end line: 1805 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3111 unit: static bool isAromaticAtom() file: layer2/Mol2Typing.cpp start line: 40 end line: 52 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3112 unit: int PyMOL_NewG3DStream() file: layer5/PyMOL.cpp start line: 602 end line: 612 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3113 unit: PyMOLreturn_status PyMOL_CmdDraw() file: layer5/PyMOL.cpp start line: 654 end line: 664 size: 11 LOC McCabe index: 1 number of parameters: 5 id: 3114 unit: PyMOLreturn_status PyMOL_CmdBackgroundColor() file: layer5/PyMOL.cpp start line: 1155 end line: 1166 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3115 unit: PyMOLreturn_status PyMOL_CmdReinitialize() file: layer5/PyMOL.cpp start line: 1168 end line: 1178 size: 11 LOC McCabe index: 2 number of parameters: 3 id: 3116 unit: PyMOLreturn_status PyMOL_CmdLoadCGO() file: layer5/PyMOL.cpp start line: 1689 end line: 1699 size: 11 LOC McCabe index: 1 number of parameters: 7 id: 3117 unit: int PyMOL_GetProgress() file: layer5/PyMOL.cpp start line: 1939 end line: 1949 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 3118 unit: PyMOLreturn_int_array PyMOL_GetImageInfo() file: layer5/PyMOL.cpp start line: 2868 end line: 2878 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3119 unit: void PyMOL_Button() file: layer5/PyMOL.cpp start line: 3025 end line: 3035 size: 11 LOC McCabe index: 3 number of parameters: 6 id: 3120 unit: int MainCheckRedundantOpen() file: layer5/main.cpp start line: 191 end line: 201 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3121 unit: static int main_common() file: layer5/main.cpp start line: 1687 end line: 1703 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3122 unit: void init_cmd() file: layer4/Cmd.cpp start line: 8726 end line: 8736 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3123 unit: static bool MovieScenePrintOrder() file: layer3/MovieScene.cpp start line: 566 end line: 579 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3124 unit: bool SeleAtomIterator::next() file: layer3/AtomIterators.cpp start line: 55 end line: 69 size: 11 LOC McCabe index: 3 number of parameters: 0 id: 3125 unit: void writeCryst1() file: layer3/MoleculeExporter.cpp start line: 502 end line: 513 size: 11 LOC McCabe index: 4 number of parameters: 0 id: 3126 unit: int PlugIOManagerLoadTraj() file: layer3/PlugIOManager.cpp start line: 49 end line: 60 size: 11 LOC McCabe index: 1 number of parameters: 14 id: 3127 unit: bool cif_is_simpledatavalue() file: layer3/CifDataValueFormatter.cpp start line: 40 end line: 55 size: 11 LOC McCabe index: 10 number of parameters: 1 id: 3128 unit: this._handle_response = function() file: modules/web/javascript/pymol.js start line: 140 end line: 150 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3129 unit: def check_ask_save() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3130 unit: def removePoints() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 11 LOC McCabe index: 5 number of parameters: 2 id: 3131 unit: def create_new() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3132 unit: def create_new() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3133 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3134 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3135 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3136 unit: def do_cas() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 2 id: 3137 unit: def setCharge() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 3 id: 3138 unit: def addcascademenu() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 6 id: 3139 unit: Matrix transpose() file: modules/cealign/src/tnt/tnt_matrix.h start line: 1019 end line: 1032 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3140 unit: Vector permute_copy() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1277 end line: 1291 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3141 unit: Array1D permute_copy() file: modules/cealign/src/tnt/jama_lu.h start line: 53 end line: 67 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3142 unit: def create_new() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3143 unit: def create_new() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3144 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3145 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3146 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3147 unit: def do_cas() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 2 id: 3148 unit: def attach() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3149 unit: def toggleChemProtein() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3150 unit: def __getitem__() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 2 id: 3151 unit: def show_help() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 3152 unit: def update_upstream() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3153 unit: def get_flat() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3154 unit: def update_va_from_canvas() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3155 unit: def run() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3156 unit: def infotxt() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3157 unit: def mkdn() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3158 unit: def mkfn() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3159 unit: def onFilter() file: modules/pmg_tk/SetEditor.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 2 id: 3160 unit: def update() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3161 unit: def _cache_validate() file: modules/pymol/internal.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3162 unit: def _cache_mark() file: modules/pymol/internal.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3163 unit: def mvprg() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3164 unit: def get_mod_value() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 3 id: 3165 unit: def OnChar() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3166 unit: def get_tk_focused() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 0 id: 3167 unit: def list_scan() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3168 unit: def guess() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 11 LOC McCabe index: 6 number of parameters: 1 id: 3169 unit: def ff_copy() file: modules/pymol/util.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 3 id: 3170 unit: def check_redundant_open() file: modules/pymol/monitoring.py start line: 0 end line: 0 size: 11 LOC McCabe index: 5 number of parameters: 2 id: 3171 unit: def __init__() file: modules/pymol/wizard/toggle.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 3 id: 3172 unit: def get_prompt() file: modules/pymol/wizard/annotation.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3173 unit: def get_panel() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3174 unit: def delete_last() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3175 unit: def do_select() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3176 unit: def clear() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3177 unit: def zoom() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3178 unit: def recount() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3179 unit: def check_valid() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3180 unit: def get_prompt() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3181 unit: def set_auto_center() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3182 unit: def reject() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3183 unit: def defer() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3184 unit: def get_panel() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3185 unit: def electomo() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3186 unit: def remove_last() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3187 unit: def setSetupUi() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3188 unit: def run() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 3189 unit: def __init__() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3190 unit: def get_unused_name() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3191 unit: def _print_statement() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 11 LOC McCabe index: 6 number of parameters: 2 id: 3192 unit: def classified() file: modules/pymol/preset.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3193 unit: def tri() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3194 unit: def cyl() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3195 unit: def vol_color() file: modules/pymol/menu.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3196 unit: def invert() file: modules/pymol/menu.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3197 unit: def complete() file: modules/pymol/menu.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3198 unit: def align_to_object() file: modules/pymol/menu.py start line: 0 end line: 0 size: 11 LOC McCabe index: 5 number of parameters: 2 id: 3199 unit: def sele_align() file: modules/pymol/menu.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 3200 unit: def copy_to() file: modules/pymol/menu.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3201 unit: def move_to_group() file: modules/pymol/menu.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 2 id: 3202 unit: def rpcResetCGO() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3203 unit: def rpcLoadFile() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 5 id: 3204 unit: def print_exc() file: modules/pymol/colorprinting.py start line: 0 end line: 0 size: 11 LOC McCabe index: 4 number of parameters: 1 id: 3205 unit: def sweep() file: modules/pymol/movie.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 3 id: 3206 unit: def pause() file: modules/pymol/movie.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 3 id: 3207 unit: def _showhide() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 11 LOC McCabe index: 8 number of parameters: 4 id: 3208 unit: def optimize() file: modules/chempy/neighbor.py start line: 0 end line: 0 size: 11 LOC McCabe index: 6 number of parameters: 1 id: 3209 unit: def check() file: modules/chempy/tinker/realtime.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3210 unit: def setup() file: modules/chempy/bmin/realtime.py start line: 0 end line: 0 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 3211 unit: def check() file: modules/chempy/bmin/realtime.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3212 unit: def get_implicit_mass() file: modules/chempy/models.py start line: 0 end line: 0 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3213 unit: def parse() file: modules/chempy/mae.py start line: 0 end line: 0 size: 11 LOC McCabe index: 5 number of parameters: 1 id: 3214 unit: def __cmp__() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 11 LOC McCabe index: 9 number of parameters: 2 id: 3215 unit: def _order() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 11 LOC McCabe index: 1 number of parameters: 1 id: 3216 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 3217 unit: void TextSetPosNColor() file: layer1/Text.cpp start line: 107 end line: 116 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 3218 unit: void TextSetColor3f() file: layer1/Text.cpp start line: 265 end line: 274 size: 10 LOC McCabe index: 1 number of parameters: 4 id: 3219 unit: void TextGetOutlineColor() file: layer1/Text.cpp start line: 384 end line: 393 size: 10 LOC McCabe index: 1 number of parameters: 5 id: 3220 unit: int PLabelPyObjectToStrMaxLen() file: layer1/P.cpp start line: 1356 end line: 1365 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 3221 unit: static int stereo_via_adjacent_array() file: layer1/Scene.cpp start line: 318 end line: 327 size: 10 LOC McCabe index: 4 number of parameters: 1 id: 3222 unit: void ScenePrimeAnimation() file: layer1/Scene.cpp start line: 377 end line: 386 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3223 unit: void SceneImageFinish() file: layer1/Scene.cpp start line: 1747 end line: 1756 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3224 unit: int SceneReinitialize() file: layer1/Scene.cpp start line: 5881 end line: 5890 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3225 unit: void SceneResetNormal() file: layer1/Scene.cpp start line: 6000 end line: 6009 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3226 unit: void SceneResetNormalCGO() file: layer1/Scene.cpp start line: 6011 end line: 6020 size: 10 LOC McCabe index: 4 number of parameters: 3 id: 3227 unit: void SceneRestartSweepTimer() file: layer1/Scene.cpp start line: 6893 end line: 6903 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3228 unit: void ScrollBar::fill() file: layer1/ScrollBar.cpp start line: 55 end line: 64 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3229 unit: static void RayGetSphereNormal() file: layer1/Ray.cpp start line: 226 end line: 238 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3230 unit: static void RayGetSphereNormalPerspective() file: layer1/Ray.cpp start line: 243 end line: 255 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3231 unit: int CRay::setLastToNoLighting() file: layer1/Ray.cpp start line: 7306 end line: 7315 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3232 unit: void RayRelease() file: layer1/Ray.cpp start line: 7671 end line: 7681 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3233 unit: void ViewElemCopy() file: layer1/View.cpp start line: 308 end line: 317 size: 10 LOC McCabe index: 5 number of parameters: 3 id: 3234 unit: void SymmetrySpaceGroupRegister() file: layer1/Symmetry.cpp start line: 247 end line: 257 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3235 unit: static int reg_name() file: layer1/Color.cpp start line: 841 end line: 850 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3236 unit: int ColorLookupColor() file: layer1/Color.cpp start line: 2906 end line: 2915 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3237 unit: void ColorUpdateFront() file: layer1/Color.cpp start line: 2945 end line: 2954 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3238 unit: int Color3fToInt() file: layer1/Color.cpp start line: 3074 end line: 3083 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3239 unit: void OrthoDirty() file: layer1/Ortho.cpp start line: 502 end line: 511 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3240 unit: void OrthoBusyPrime() file: layer1/Ortho.cpp start line: 583 end line: 592 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3241 unit: void OrthoDoViewportWhenReleased() file: layer1/Ortho.cpp start line: 1208 end line: 1217 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3242 unit: inline bool PConvArgsFromPyList() file: layer1/PConvArgs.h start line: 161 end line: 170 size: 10 LOC McCabe index: 7 number of parameters: 8 id: 3243 unit: static void ColladaWriteInstanceEffectMaterial() file: layer1/COLLADA.cpp start line: 310 end line: 319 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 3244 unit: void ShakerAddLineCon() file: layer1/Shaker.cpp start line: 336 end line: 346 size: 10 LOC McCabe index: 1 number of parameters: 4 id: 3245 unit: int MoviePlaying() file: layer1/Movie.cpp start line: 605 end line: 616 size: 10 LOC McCabe index: 5 number of parameters: 1 id: 3246 unit: int MovieGetLength() file: layer1/Movie.cpp start line: 1490 end line: 1499 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3247 unit: void MovieFree() file: layer1/Movie.cpp start line: 1543 end line: 1552 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3248 unit: void UtilFillVLA() file: layer0/Util.cpp start line: 130 end line: 139 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3249 unit: void TrackerFree() file: layer0/Tracker.cpp start line: 918 end line: 927 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3250 unit: void WordMatchOptionsConfigInteger() file: layer0/Word.cpp start line: 98 end line: 107 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3251 unit: void WordMatchOptionsConfigAlpha() file: layer0/Word.cpp start line: 109 end line: 118 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3252 unit: void WordMatchOptionsConfigMixed() file: layer0/Word.cpp start line: 132 end line: 141 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3253 unit: void WordMatchOptionsConfigNameList() file: layer0/Word.cpp start line: 143 end line: 152 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3254 unit: void WordListDump() file: layer0/Word.cpp start line: 630 end line: 639 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3255 unit: void Block::recursiveDraw() file: layer0/Block.cpp start line: 126 end line: 135 size: 10 LOC McCabe index: 4 number of parameters: 1 id: 3256 unit: int CShaderPrg::GetAttribLocation() file: layer0/ShaderPrg.cpp start line: 302 end line: 312 size: 10 LOC McCabe index: 4 number of parameters: 1 id: 3257 unit: int CShaderMgr::AddShaderPrg() file: layer0/ShaderMgr.cpp start line: 932 end line: 941 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3258 unit: void CShaderMgr::FreeAllVBOs() file: layer0/ShaderMgr.cpp start line: 985 end line: 998 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 3259 unit: void CShaderMgr::SetPreprocVar() file: layer0/ShaderMgr.cpp start line: 1707 end line: 1716 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3260 unit: int CShaderMgr::GetAttributeUID() file: layer0/ShaderMgr.cpp start line: 1771 end line: 1781 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3261 unit: void PixmapInit() file: layer0/Pixmap.cpp start line: 23 end line: 32 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 3262 unit: void dump33f() file: layer0/Vector.cpp start line: 131 end line: 140 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3263 unit: void get_system3f() file: layer0/Vector.cpp start line: 208 end line: 217 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 3264 unit: void wiggle3f() file: layer0/Vector.cpp start line: 257 end line: 267 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 3265 unit: bool is_identityf() file: layer0/Vector.cpp start line: 349 end line: 358 size: 10 LOC McCabe index: 4 number of parameters: 3 id: 3266 unit: void read_data_from_buffer() file: layer0/MyPNG.cpp start line: 123 end line: 134 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3267 unit: bool bufferSubData() file: layer0/GenericBuffer.h start line: 263 end line: 272 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3268 unit: void VLAFree() file: layer0/MemoryDebug.cpp start line: 138 end line: 147 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3269 unit: void IsofieldGetCorners() file: layer0/Isosurf.cpp start line: 2182 end line: 2191 size: 10 LOC McCabe index: 5 number of parameters: 3 id: 3270 unit: static void MakeVertex() file: layer0/Sphere.cpp start line: 365 end line: 374 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3271 unit: __inline__ static float inline_diffsq3f() file: layer0/Vector.h start line: 447 end line: 456 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3272 unit: ov_size OVHeapArray_GetSize() file: ov/src/OVHeapArray.cpp start line: 108 end line: 117 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 3273 unit: int ChampMatch_1V1_Map() file: contrib/champ/champ.c start line: 1923 end line: 1933 size: 10 LOC McCabe index: 1 number of parameters: 5 id: 3274 unit: static int read_car_coordinates() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 142 end line: 154 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3275 unit: static void vtf_close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 974 end line: 990 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3276 unit: static void print_matrix4() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 585 end line: 594 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3277 unit: VMDEXTERNSTATIC int hash_lookup() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 127 end line: 141 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3278 unit: void put_element_setup_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 433 end line: 444 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3279 unit: int equal_strings() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1301 end line: 1311 size: 10 LOC McCabe index: 5 number of parameters: 2 id: 3280 unit: void append_comment_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2523 end line: 2535 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3281 unit: void append_obj_info_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2563 end line: 2575 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3282 unit: VMDEXTERNSTATIC int inthash_lookup() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 126 end line: 140 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3283 unit: int DtrReader::next() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1675 end line: 1685 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3284 unit: static void swap2_unaligned() file: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h start line: 32 end line: 42 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3285 unit: static void swap4_aligned() file: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h start line: 110 end line: 119 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3286 unit: static inline int host_is_little_endian() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 270 end line: 280 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3287 unit: static int mdio_tsfree() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 480 end line: 492 size: 10 LOC McCabe index: 7 number of parameters: 2 id: 3288 unit: static int xtc_sizeofint() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1675 end line: 1685 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3289 unit: void set_meta() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 245 end line: 254 size: 10 LOC McCabe index: 4 number of parameters: 1 id: 3290 unit: static void vasp_timestep_unitcell() file: contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h start line: 111 end line: 122 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3291 unit: void predict_nameless_block() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1250 end line: 1266 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3292 unit: void MMTF_GroupType_destroy() file: contrib/mmtf-c/mmtf_parser.cpp start line: 328 end line: 337 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3293 unit: def get_packages() file: setup.py start line: 0 end line: 0 size: 10 LOC McCabe index: 6 number of parameters: 3 id: 3294 unit: int AtomInfoInit() file: layer2/AtomInfo.cpp start line: 180 end line: 189 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3295 unit: void RepDistLabelFree() file: layer2/RepDistLabel.cpp start line: 59 end line: 68 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3296 unit: void RepDihedralFree() file: layer2/RepDihedral.cpp start line: 49 end line: 58 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3297 unit: void RepCartoonFree() file: layer2/RepCartoon.cpp start line: 69 end line: 78 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3298 unit: int CartoonExtrudeCircle() file: layer2/RepCartoon.cpp start line: 2298 end line: 2307 size: 10 LOC McCabe index: 3 number of parameters: 7 id: 3299 unit: static bool is_N_H1_or_H3() file: layer2/CifMoleculeReader.cpp start line: 378 end line: 388 size: 10 LOC McCabe index: 4 number of parameters: 3 id: 3300 unit: int operator() file: layer2/CifMoleculeReader.cpp start line: 954 end line: 966 size: 10 LOC McCabe index: 3 number of parameters: 0 id: 3301 unit: static void ObjectVolumeFree() file: layer2/ObjectVolume.cpp start line: 322 end line: 332 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3302 unit: static void get44FracToRealFromCorner() file: layer2/ObjectVolume.cpp start line: 404 end line: 413 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3303 unit: int CoordSetTransformAtomTTTf() file: layer2/CoordSet.cpp start line: 555 end line: 566 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3304 unit: int CoordSetTransformAtomR44f() file: layer2/CoordSet.cpp start line: 570 end line: 581 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3305 unit: void CoordSetRecordTxfApplied() file: layer2/CoordSet.cpp start line: 585 end line: 596 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3306 unit: void CoordSetRealToFrac() file: layer2/CoordSet.cpp start line: 720 end line: 729 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3307 unit: void CoordSetTransform44f() file: layer2/CoordSet.cpp start line: 733 end line: 742 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3308 unit: void CoordSetTransform33f() file: layer2/CoordSet.cpp start line: 747 end line: 756 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3309 unit: void CoordSetFracToReal() file: layer2/CoordSet.cpp start line: 783 end line: 792 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3310 unit: static void ObjectAlignmentInvalidate() file: layer2/ObjectAlignment.cpp start line: 1183 end line: 1192 size: 10 LOC McCabe index: 4 number of parameters: 4 id: 3311 unit: void ObjectGadgetUpdateStates() file: layer2/ObjectGadget.cpp start line: 420 end line: 430 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3312 unit: void RepDistDashFree() file: layer2/RepDistDash.cpp start line: 53 end line: 62 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3313 unit: void ObjectDistUpdate() file: layer2/ObjectDist.cpp start line: 414 end line: 424 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3314 unit: void ObjectDistInvalidateRep() file: layer2/ObjectDist.cpp start line: 428 end line: 438 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3315 unit: static void ObjectDistReset() file: layer2/ObjectDist.cpp start line: 516 end line: 526 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3316 unit: void RepAngleFree() file: layer2/RepAngle.cpp start line: 49 end line: 58 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3317 unit: void RepLabelFree() file: layer2/RepLabel.cpp start line: 95 end line: 104 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3318 unit: static void ObjectSliceStateFree() file: layer2/ObjectSlice.cpp start line: 202 end line: 211 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3319 unit: void VFontFree() file: layer2/VFont.cpp start line: 278 end line: 287 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3320 unit: float connect_cutoff_adjustment() file: layer2/ObjectMolecule2.cpp start line: 3985 end line: 3996 size: 10 LOC McCabe index: 5 number of parameters: 2 id: 3321 unit: void ObjectMapTransformMatrix() file: layer2/ObjectMap.cpp start line: 147 end line: 157 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3322 unit: void ObjectMapResetMatrix() file: layer2/ObjectMap.cpp start line: 164 end line: 174 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3323 unit: PyMOLreturn_status PyMOL_CmdOrigin() file: layer5/PyMOL.cpp start line: 838 end line: 847 size: 10 LOC McCabe index: 1 number of parameters: 4 id: 3324 unit: PyMOLreturn_status PyMOL_CmdOriginAt() file: layer5/PyMOL.cpp start line: 849 end line: 858 size: 10 LOC McCabe index: 1 number of parameters: 5 id: 3325 unit: PyMOLreturn_status PyMOL_CmdColor() file: layer5/PyMOL.cpp start line: 1142 end line: 1152 size: 10 LOC McCabe index: 1 number of parameters: 5 id: 3326 unit: int PyMOL_GetImageData() file: layer5/PyMOL.cpp start line: 2880 end line: 2889 size: 10 LOC McCabe index: 2 number of parameters: 7 id: 3327 unit: int PyMOL_GetInterrupt() file: layer5/PyMOL.cpp start line: 2986 end line: 2996 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3328 unit: int MainMovieCopyFrame() file: layer5/main.cpp start line: 150 end line: 159 size: 10 LOC McCabe index: 2 number of parameters: 5 id: 3329 unit: int MainMoviePurgeFrame() file: layer5/main.cpp start line: 161 end line: 170 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3330 unit: int MainSceneCopy() file: layer5/main.cpp start line: 212 end line: 222 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3331 unit: void ExportDotsObjFree() file: layer4/Export.cpp start line: 209 end line: 218 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3332 unit: void EditorFavorOrigin() file: layer3/Editor.cpp start line: 82 end line: 91 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3333 unit: void SeleCoordIterator::reset() file: layer3/AtomIterators.cpp start line: 95 end line: 105 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 3334 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 1484 end line: 1495 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 3335 unit: int PlugIOManagerInit() file: layer3/PlugIOManager.cpp start line: 105 end line: 114 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3336 unit: def create_all() file: create_shadertext.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3337 unit: def close() file: create_shadertext.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 1 id: 3338 unit: function quote() file: modules/web/javascript/json2.js start line: 203 end line: 218 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3339 unit: this.sendJSON = function() file: modules/web/javascript/pymol.js start line: 177 end line: 188 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3340 unit: _dispatch: function() file: modules/web/javascript/pymol.js start line: 227 end line: 238 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3341 unit: def setSyntax() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3342 unit: def handle_file_open_active() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3343 unit: def itemChanged() file: modules/pmg_qt/advanced_settings_gui.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3344 unit: def getColors() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3345 unit: def findPoint() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3346 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3347 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3348 unit: def deleteBond() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3349 unit: def setOrder() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3350 unit: def tkinter_init() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 0 id: 3351 unit: TA2 transpose() file: modules/cealign/src/ccealignmodule.cpp start line: 644 end line: 656 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3352 unit: Real hypot() file: modules/cealign/src/tnt/tnt_math_utils.h start line: 21 end line: 31 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3353 unit: inline reference operator() file: modules/cealign/src/tnt/tnt_matrix.h start line: 381 end line: 390 size: 10 LOC McCabe index: 1 number of parameters: 0 id: 3354 unit: inline const_reference operator() file: modules/cealign/src/tnt/tnt_matrix.h start line: 394 end line: 403 size: 10 LOC McCabe index: 1 number of parameters: 0 id: 3355 unit: inline Matrix mult() file: modules/cealign/src/tnt/tnt_matrix.h start line: 648 end line: 659 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3356 unit: double norm() file: modules/cealign/src/tnt/tnt_matrix.h start line: 996 end line: 1007 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3357 unit: Vector mult() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 200 end line: 209 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3358 unit: Matrix permute_copy() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1262 end line: 1275 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 3359 unit: Real det() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1438 end line: 1447 size: 10 LOC McCabe index: 3 number of parameters: 0 id: 3360 unit: Array2D permute_copy() file: modules/cealign/src/tnt/jama_lu.h start line: 38 end line: 51 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 3361 unit: Real det() file: modules/cealign/src/tnt/jama_lu.h start line: 214 end line: 223 size: 10 LOC McCabe index: 3 number of parameters: 0 id: 3362 unit: Vector elementwise_mult() file: modules/cealign/src/tnt/tnt_vector.h start line: 413 end line: 426 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3363 unit: T dot_prod() file: modules/cealign/src/tnt/tnt_vector.h start line: 443 end line: 455 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3364 unit: def __init__() file: modules/pmg_tk/skins/normal/ModalWindow.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 8 id: 3365 unit: def session_save() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3366 unit: def createInterface() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3367 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3368 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3369 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 6 id: 3370 unit: def setCharge() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3371 unit: def setOrder() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3372 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3373 unit: def deferred_activate() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 10 LOC McCabe index: 5 number of parameters: 1 id: 3374 unit: def trace_w() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3375 unit: def onchange() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3376 unit: def set_flat() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3377 unit: def canvas_add_point() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 3378 unit: def _reporterror() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3379 unit: def flush_fifo_once() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3380 unit: def mkft() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3381 unit: def mkfnb() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3382 unit: def __init__() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3383 unit: def command() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3384 unit: def command() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3385 unit: def colorbyB() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3386 unit: def toggle_labels() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3387 unit: def toggle_cgos() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3388 unit: def toggle_ligands() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3389 unit: def toggle_sites() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3390 unit: def toggle_waters() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3391 unit: def toggle_dashes() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3392 unit: def toggle_zooms() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3393 unit: def _cache_clear() file: modules/pymol/internal.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3394 unit: def _coordset_update_thread() file: modules/pymol/internal.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3395 unit: def _object_update_thread() file: modules/pymol/internal.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3396 unit: def _interpret_color() file: modules/pymol/internal.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3397 unit: def _dump_floats() file: modules/pymol/internal.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 3 id: 3398 unit: def _dump_ufloats() file: modules/pymol/internal.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 3 id: 3399 unit: def page_about() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3400 unit: def urlopen() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3401 unit: def urlreadstr() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3402 unit: def get_panel() file: modules/pymol/wizard/message.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3403 unit: def get_panel() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3404 unit: def delete_last() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3405 unit: def do_state() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 10 LOC McCabe index: 5 number of parameters: 2 id: 3406 unit: def update_object_menu() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 10 LOC McCabe index: 5 number of parameters: 1 id: 3407 unit: def accept() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3408 unit: def cleanup() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3409 unit: def clear() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3410 unit: def cleanup() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3411 unit: def clear() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3412 unit: def cleanup() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3413 unit: def getSaveFileNameWithExt() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3414 unit: def pub_solv() file: modules/pymol/preset.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3415 unit: def get_setting_tuple_new() file: modules/pymol/setting.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3416 unit: def get_setting_boolean() file: modules/pymol/setting.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3417 unit: def get_setting_float() file: modules/pymol/setting.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3418 unit: def get_setting_text() file: modules/pymol/setting.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3419 unit: def func() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 0 id: 3420 unit: def func() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 3421 unit: def state() file: modules/pymol/menu.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3422 unit: def exclude() file: modules/pymol/menu.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3423 unit: def align_to_sele() file: modules/pymol/menu.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3424 unit: def modify_sele() file: modules/pymol/menu.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3425 unit: def ramp_action() file: modules/pymol/menu.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3426 unit: def mol_ss() file: modules/pymol/menu.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3427 unit: def movie_main() file: modules/pymol/menu.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3428 unit: def rpcLoadPDB() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 3429 unit: def rpcLoadMolBlock() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 3430 unit: def rpcLoadSurface() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 3431 unit: def rpcLoadSurfaceData() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 4 id: 3432 unit: def unquote() file: modules/pymol/creating.py start line: 0 end line: 0 size: 10 LOC McCabe index: 5 number of parameters: 1 id: 3433 unit: def ext_hide() file: modules/pymol/gui.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3434 unit: def ext_show() file: modules/pymol/gui.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3435 unit: def save_as() file: modules/pymol/gui.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3436 unit: def save_image() file: modules/pymol/gui.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3437 unit: def next_color() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 0 id: 3438 unit: def get_phipsi() file: modules/pymol/querying.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3439 unit: def combine_fragments() file: modules/chempy/charge.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 3440 unit: def new_in_residue() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 10 LOC McCabe index: 8 number of parameters: 1 id: 3441 unit: def exact_1vN_n() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 3 id: 3442 unit: def read() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 10 LOC McCabe index: 5 number of parameters: 1 id: 3443 unit: def multiply() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 3444 unit: def transpose() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3445 unit: def get_angle_formed_by() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 3 id: 3446 unit: def get_energy_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 3447 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 10 LOC McCabe index: 4 number of parameters: 2 id: 3448 unit: def get_info() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 3449 unit: def has_key() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 3450 unit: def keys() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 3451 unit: def preset_metal() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 0 id: 3452 unit: def preset_plastic() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 0 id: 3453 unit: def preset_rubber() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 10 LOC McCabe index: 1 number of parameters: 0 id: 3454 unit: void TextDrawCharRepeat() file: layer1/Text.cpp start line: 228 end line: 236 size: 9 LOC McCabe index: 2 number of parameters: 6 id: 3455 unit: void TextGetColorUChar() file: layer1/Text.cpp start line: 374 end line: 382 size: 9 LOC McCabe index: 1 number of parameters: 5 id: 3456 unit: static int IsSecurityRequired() file: layer1/P.cpp start line: 1619 end line: 1629 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3457 unit: void PDo() file: layer1/P.cpp start line: 2390 end line: 2398 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3458 unit: int SceneViewEqual() file: layer1/Scene.cpp start line: 129 end line: 137 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3459 unit: int SceneLoopDrag() file: layer1/Scene.cpp start line: 497 end line: 505 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 3460 unit: void SceneChanged() file: layer1/Scene.cpp start line: 2142 end line: 2150 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3461 unit: void SceneZoom() file: layer1/Scene.cpp start line: 7010 end line: 7019 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3462 unit: static int SettingSet_color_from_3f() file: layer1/Setting.cpp start line: 1727 end line: 1735 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3463 unit: void RepInit() file: layer1/Rep.cpp start line: 177 end line: 185 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3464 unit: void CharacterRenderOpenGLPrime() file: layer1/Character.cpp start line: 204 end line: 214 size: 9 LOC McCabe index: 7 number of parameters: 2 id: 3465 unit: void CRay::transparentf() file: layer1/Ray.cpp start line: 6641 end line: 6649 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3466 unit: void CRay::interiorColor3fv() file: layer1/Ray.cpp start line: 6651 end line: 6659 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3467 unit: void RayFree() file: layer1/Ray.cpp start line: 7685 end line: 7693 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3468 unit: static float RayGetRawDepth() file: layer1/Ray.cpp start line: 7826 end line: 7834 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3469 unit: int WizardActive() file: layer1/Wizard.cpp start line: 313 end line: 321 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3470 unit: int TypeInit() file: layer1/TypeFace.cpp start line: 129 end line: 137 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3471 unit: inline bool PConvArgsFromPyList() file: layer1/PConvArgs.h start line: 150 end line: 158 size: 9 LOC McCabe index: 6 number of parameters: 7 id: 3472 unit: static void ColladaBeginTristripsElement() file: layer1/COLLADA.cpp start line: 599 end line: 608 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3473 unit: static void ColladaBeginTrifansElement() file: layer1/COLLADA.cpp start line: 623 end line: 632 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3474 unit: static void FontGLUTRestore() file: layer1/FontGLUT.cpp start line: 47 end line: 55 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3475 unit: void ShakerFree() file: layer1/Shaker.cpp start line: 348 end line: 356 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3476 unit: void ObjectStatePopMatrix() file: layer1/PyMOLObject.cpp start line: 1453 end line: 1461 size: 9 LOC McCabe index: 4 number of parameters: 2 id: 3477 unit: static void glBlendFunc_default() file: layer1/SceneRender.cpp start line: 143 end line: 152 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3478 unit: void UtilApplySortedIndices() file: layer0/Util.cpp start line: 310 end line: 318 size: 9 LOC McCabe index: 2 number of parameters: 5 id: 3479 unit: int WordInit() file: layer0/Word.cpp start line: 669 end line: 679 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3480 unit: void WordPrimeCommaMatch() file: layer0/Word.cpp start line: 686 end line: 694 size: 9 LOC McCabe index: 6 number of parameters: 2 id: 3481 unit: void FeedbackPop() file: layer0/Feedback.cpp start line: 90 end line: 98 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3482 unit: int CShaderPrg::Enable() file: layer0/ShaderPrg.cpp start line: 145 end line: 158 size: 9 LOC McCabe index: 5 number of parameters: 0 id: 3483 unit: static void TetsurfInterpolate2() file: layer0/Tetsurf.cpp start line: 696 end line: 704 size: 9 LOC McCabe index: 1 number of parameters: 6 id: 3484 unit: void MatchFree() file: layer0/Match.cpp start line: 619 end line: 627 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3485 unit: void CShaderMgr::freeGPUBuffer() file: layer0/ShaderMgr.cpp start line: 1733 end line: 1742 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3486 unit: void frameBuffer_t::attach_texture() file: layer0/GenericBuffer.cpp start line: 306 end line: 314 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3487 unit: void frameBuffer_t::attach_renderbuffer() file: layer0/GenericBuffer.cpp start line: 316 end line: 324 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3488 unit: short countBits() file: layer0/Vector.cpp start line: 36 end line: 44 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3489 unit: short countBitsInt() file: layer0/Vector.cpp start line: 45 end line: 55 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3490 unit: void get_system1f3f() file: layer0/Vector.cpp start line: 219 end line: 227 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3491 unit: void extrapolate3f() file: layer0/Vector.cpp start line: 238 end line: 246 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3492 unit: void transform33f3f() file: layer0/Vector.cpp start line: 619 end line: 627 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3493 unit: void transform33Tf3f() file: layer0/Vector.cpp start line: 701 end line: 709 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3494 unit: void transform44f3f() file: layer0/Vector.cpp start line: 712 end line: 720 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3495 unit: void transform44d3f() file: layer0/Vector.cpp start line: 722 end line: 730 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3496 unit: void transform44d3d() file: layer0/Vector.cpp start line: 732 end line: 740 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3497 unit: void transform44d3fas33d3f() file: layer0/Vector.cpp start line: 742 end line: 750 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3498 unit: void transform44f3fas33f3f() file: layer0/Vector.cpp start line: 753 end line: 761 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3499 unit: void inverse_transformC44f3f() file: layer0/Vector.cpp start line: 763 end line: 771 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3500 unit: void inverse_transform44f3f() file: layer0/Vector.cpp start line: 773 end line: 781 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3501 unit: void inverse_transform44d3f() file: layer0/Vector.cpp start line: 783 end line: 791 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3502 unit: void inverse_transform44d3d() file: layer0/Vector.cpp start line: 793 end line: 801 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3503 unit: void transformTTT44f3f() file: layer0/Vector.cpp start line: 1472 end line: 1480 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3504 unit: void transform_normalTTT44f3f() file: layer0/Vector.cpp start line: 1482 end line: 1490 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3505 unit: int countchrs() file: layer0/Vector.cpp start line: 2113 end line: 2121 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3506 unit: void replicate_data() file: layer0/GenericBuffer.h start line: 504 end line: 512 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3507 unit: static void IsosurfInterpolate() file: layer0/Isosurf.cpp start line: 134 end line: 142 size: 9 LOC McCabe index: 1 number of parameters: 6 id: 3508 unit: void FieldFree() file: layer0/Field.cpp start line: 484 end line: 492 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3509 unit: static void SpherePurge() file: layer0/Sphere.cpp start line: 307 end line: 316 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3510 unit: static float SphericalAngle() file: layer0/Sphere.cpp start line: 376 end line: 388 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 3511 unit: __inline__ static float inline_project3f() file: layer0/Vector.h start line: 532 end line: 542 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3512 unit: void ChampAtomFree() file: contrib/champ/champ.c start line: 1786 end line: 1794 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3513 unit: void ChampBondFree() file: contrib/champ/champ.c start line: 1809 end line: 1817 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3514 unit: void ChampUniqueListFree() file: contrib/champ/champ.c start line: 1888 end line: 1896 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3515 unit: void ChampMatchFreeChain() file: contrib/champ/champ.c start line: 2041 end line: 2049 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3516 unit: int ChampBondMatch() file: contrib/champ/champ.c start line: 5205 end line: 5213 size: 9 LOC McCabe index: 12 number of parameters: 2 id: 3517 unit: void OSMemoryInit() file: contrib/champ/os_memory.c start line: 95 end line: 103 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3518 unit: void feedback_Pop() file: contrib/champ/feedback2.c start line: 63 end line: 71 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3519 unit: static void close_mdf_read() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 385 end line: 393 size: 9 LOC McCabe index: 5 number of parameters: 1 id: 3520 unit: static int have_keyline() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 1006 end line: 1016 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3521 unit: static void skipNextWord() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 280 end line: 291 size: 9 LOC McCabe index: 5 number of parameters: 3 id: 3522 unit: static inline bool isValidateRMSDBond() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1163 end line: 1172 size: 9 LOC McCabe index: 25 number of parameters: 1 id: 3523 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1033 end line: 1041 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3524 unit: static void swap2_aligned() file: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h start line: 96 end line: 105 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3525 unit: static int write_vaspposcar_structure() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 316 end line: 328 size: 9 LOC McCabe index: 4 number of parameters: 3 id: 3526 unit: static int mdio_readline() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 422 end line: 441 size: 9 LOC McCabe index: 8 number of parameters: 4 id: 3527 unit: static int put_trx_string() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1502 end line: 1513 size: 9 LOC McCabe index: 6 number of parameters: 2 id: 3528 unit: static void close_xsf_read() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 893 end line: 902 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3529 unit: void strip_whitespace() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 663 end line: 671 size: 9 LOC McCabe index: 5 number of parameters: 1 id: 3530 unit: static void get_str() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 781 end line: 789 size: 9 LOC McCabe index: 5 number of parameters: 3 id: 3531 unit: virtual void insert_row() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 981 end line: 989 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3532 unit: int read_timestep2() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1855 end line: 1863 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3533 unit: static int AtomInfoPrimeUniqueIDs() file: layer2/AtomInfo.cpp start line: 95 end line: 103 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3534 unit: int AtomInfoReserveUniqueID() file: layer2/AtomInfo.cpp start line: 105 end line: 113 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3535 unit: int AtomInfoIsUniqueIDActive() file: layer2/AtomInfo.cpp start line: 115 end line: 123 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3536 unit: int AtomInfoUpdateAutoColor() file: layer2/AtomInfo.cpp start line: 1326 end line: 1334 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3537 unit: int BondTypeCompare() file: layer2/AtomInfo.cpp start line: 2796 end line: 2804 size: 9 LOC McCabe index: 7 number of parameters: 3 id: 3538 unit: void AtomInfoGetAlignedPDBResidueName() file: layer2/AtomInfo.cpp start line: 2854 end line: 2862 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3539 unit: bool isMetal() file: layer2/AtomInfo.h start line: 296 end line: 304 size: 9 LOC McCabe index: 11 number of parameters: 0 id: 3540 unit: int get() file: layer2/CifBondDict.h start line: 104 end line: 112 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3541 unit: inline int prioritize() file: layer2/RepCartoon.cpp start line: 2042 end line: 2050 size: 9 LOC McCabe index: 6 number of parameters: 2 id: 3542 unit: void RepCartoonInvalidate() file: layer2/RepCartoon.cpp start line: 2764 end line: 2772 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3543 unit: void set() file: layer2/CifMoleculeReader.cpp start line: 86 end line: 94 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3544 unit: inline bool find2() file: layer2/CifMoleculeReader.cpp start line: 206 end line: 214 size: 9 LOC McCabe index: 3 number of parameters: 5 id: 3545 unit: template int compare() file: layer2/CifMoleculeReader.cpp start line: 524 end line: 532 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3546 unit: void ObjectGadgetRampFree() file: layer2/ObjectGadgetRamp.cpp start line: 44 end line: 52 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3547 unit: int DistSetGetLabelVertex() file: layer2/DistSet.cpp start line: 40 end line: 48 size: 9 LOC McCabe index: 4 number of parameters: 3 id: 3548 unit: void AtomStateGetSetting() file: layer2/CoordSet.cpp start line: 1779 end line: 1789 size: 9 LOC McCabe index: 5 number of parameters: 2 id: 3549 unit: static void SolventDotFree() file: layer2/RepSurface.cpp start line: 141 end line: 149 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3550 unit: bool visibility_test() file: layer2/RepSurface.cpp start line: 208 end line: 216 size: 9 LOC McCabe index: 6 number of parameters: 3 id: 3551 unit: static void SurfaceJobFree() file: layer2/RepSurface.cpp start line: 3053 end line: 3061 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3552 unit: static void ObjectDistInvalidate() file: layer2/ObjectDist.cpp start line: 482 end line: 490 size: 9 LOC McCabe index: 3 number of parameters: 4 id: 3553 unit: void Copy_BondType() file: layer2/BondTypeHistory.cpp start line: 14 end line: 22 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3554 unit: void SculptCachePurge() file: layer2/SculptCache.cpp start line: 54 end line: 62 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3555 unit: static void sshash_free() file: layer2/ObjectMolecule2.cpp start line: 1828 end line: 1836 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3556 unit: int ObjectMapGetMatrix() file: layer2/ObjectMap.cpp start line: 184 end line: 194 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3557 unit: static void swap_endian() file: layer2/ObjectMap.cpp start line: 2371 end line: 2379 size: 9 LOC McCabe index: 3 number of parameters: 3 id: 3558 unit: int PyMOL_FreeResultArray() file: layer5/PyMOL.cpp start line: 644 end line: 652 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3559 unit: PyMOLreturn_status PyMOL_CmdCapture() file: layer5/PyMOL.cpp start line: 666 end line: 674 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3560 unit: PyMOLreturn_status PyMOL_CmdZoom() file: layer5/PyMOL.cpp start line: 804 end line: 812 size: 9 LOC McCabe index: 1 number of parameters: 7 id: 3561 unit: PyMOLreturn_status PyMOL_CmdLabel() file: layer5/PyMOL.cpp start line: 917 end line: 925 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 3562 unit: void PyMOL_SwapBuffers() file: layer5/PyMOL.cpp start line: 3042 end line: 3050 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3563 unit: PyMOLreturn_status PyMOL_SetIsEnabledCallback() file: layer5/PyMOL.cpp start line: 3217 end line: 3225 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3564 unit: void MainRunString() file: layer5/main.cpp start line: 130 end line: 138 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3565 unit: void MainMovieCopyPrepare() file: layer5/main.cpp start line: 140 end line: 148 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3566 unit: void MainMovieCopyFinish() file: layer5/main.cpp start line: 172 end line: 180 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3567 unit: void MainMaximizeWindow() file: layer5/main.cpp start line: 1365 end line: 1374 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3568 unit: int main_exec() file: layer5/main.cpp start line: 1663 end line: 1673 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3569 unit: int main_shared() file: layer5/main.cpp start line: 1675 end line: 1685 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3570 unit: static int APIEnterNotModal() file: layer4/Cmd.cpp start line: 201 end line: 209 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3571 unit: static int APIEnterBlockedNotModal() file: layer4/Cmd.cpp start line: 235 end line: 243 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3572 unit: static void APIExit() file: layer4/Cmd.cpp start line: 245 end line: 253 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3573 unit: std::string CMovieScenes::getUniqueKey() file: layer3/MovieScene.cpp start line: 111 end line: 121 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 3574 unit: bool CoordSetAtomIterator::next() file: layer3/AtomIterators.cpp start line: 14 end line: 25 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 3575 unit: void MoleculeExporter::endObject() file: layer3/MoleculeExporter.cpp start line: 285 end line: 294 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 3576 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 729 end line: 739 size: 9 LOC McCabe index: 1 number of parameters: 0 id: 3577 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 866 end line: 874 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 3578 unit: void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 1244 end line: 1255 size: 9 LOC McCabe index: 1 number of parameters: 0 id: 3579 unit: void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 1563 end line: 1572 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3580 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 1597 end line: 1606 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3581 unit: static void cgo_check_beginend() file: layer3/PlugIOManager.cpp start line: 706 end line: 714 size: 9 LOC McCabe index: 4 number of parameters: 3 id: 3582 unit: def open_builder_panel() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3583 unit: def askopenfilename() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3584 unit: def formatTable() file: modules/pmg_qt/advanced_settings_gui.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3585 unit: def sculpt_deactivate() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3586 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3587 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3588 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 2 id: 3589 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3590 unit: def do_less() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 2 id: 3591 unit: inline T dot_product() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 104 end line: 113 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3592 unit: inline double norm() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 167 end line: 177 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3593 unit: void getS() file: modules/cealign/src/tnt/jama_svd.h start line: 496 end line: 504 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3594 unit: void insert() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 137 end line: 146 size: 9 LOC McCabe index: 3 number of parameters: 4 id: 3595 unit: int isFullRank() file: modules/cealign/src/tnt/jama_qr.h start line: 111 end line: 119 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 3596 unit: double Stopwatch::stop() file: modules/cealign/src/tnt/tnt_stopwatch.h start line: 62 end line: 70 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3597 unit: inline double Stopwatch::read() file: modules/cealign/src/tnt/tnt_stopwatch.h start line: 82 end line: 90 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3598 unit: int isFullRank() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1641 end line: 1649 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 3599 unit: void getS() file: modules/cealign/src/tnt/tnt_linalg.h start line: 2325 end line: 2333 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3600 unit: Array3D Array3D::copy() file: modules/cealign/src/tnt/tnt_array3d.h start line: 184 end line: 193 size: 9 LOC McCabe index: 4 number of parameters: 0 id: 3601 unit: def doSaveAs() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3602 unit: def onClose() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3603 unit: def pack() file: modules/pmg_tk/skins/normal/ModalWindow.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3604 unit: def createCommandArea() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3605 unit: def createMessageBar() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3606 unit: def update_menus() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3607 unit: def show_about() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3608 unit: def sculpt_deactivate() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3609 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3610 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3611 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 2 id: 3612 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3613 unit: def do_less() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 5 number of parameters: 2 id: 3614 unit: def deleteBond() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3615 unit: def report_state() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3616 unit: def onhover() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3617 unit: def closest_point() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3618 unit: def mkdnb() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3619 unit: def filevalidate() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 2 id: 3620 unit: def setfilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3621 unit: def validate() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3622 unit: def updateFieldLines() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3623 unit: def _sgi_stereo() file: modules/pymol/internal.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3624 unit: def doTypedCommand() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 2 id: 3625 unit: def get_editor_scheme() file: modules/pymol/editing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3626 unit: def set_object_color() file: modules/pymol/editing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 4 id: 3627 unit: def OnMouseDown() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3628 unit: def get_version() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3629 unit: def remove_repository() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3630 unit: def reload() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3631 unit: def c_startup() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 9 LOC McCabe index: 5 number of parameters: 2 id: 3632 unit: def retrieve() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3633 unit: def get_full_url() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3634 unit: def cbss() file: modules/pymol/util.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3635 unit: def color_deep() file: modules/pymol/util.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 4 id: 3636 unit: def chainbow() file: modules/pymol/util.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3637 unit: def fix_dict() file: modules/pymol/keywords.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3638 unit: def get_menu() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3639 unit: def __init__() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 3 id: 3640 unit: def get_panel() file: modules/pymol/wizard/security.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3641 unit: def get_panel() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3642 unit: def _validate_instance() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3643 unit: def update_menus() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3644 unit: def get_panel() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3645 unit: def cleanup() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3646 unit: def __init__() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 3 id: 3647 unit: def cleanup() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 9 LOC McCabe index: 5 number of parameters: 1 id: 3648 unit: def cleanup() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3649 unit: def count() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3650 unit: def create_object() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 9 LOC McCabe index: 5 number of parameters: 2 id: 3651 unit: def __init__() file: modules/pymol/wizard/fedora.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 3 id: 3652 unit: def raster3d() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3653 unit: def structure() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3654 unit: def __init__() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3655 unit: def get_panel() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3656 unit: def get_prompt() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3657 unit: def get_sele_list() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 9 LOC McCabe index: 9 number of parameters: 2 id: 3658 unit: def do_select() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3659 unit: def __exit__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 4 id: 3660 unit: def exec_str() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3661 unit: def b_factor_putty() file: modules/pymol/preset.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3662 unit: def ligand_sites_trans() file: modules/pymol/preset.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3663 unit: def ligand_sites_trans_hq() file: modules/pymol/preset.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3664 unit: def get_setting_int() file: modules/pymol/setting.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 3665 unit: def get_bond_print() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 4 id: 3666 unit: def import_coords() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 4 id: 3667 unit: def sphere() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3668 unit: def __init__() file: modules/pymol/parser.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3669 unit: def exec_python() file: modules/pymol/parser.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 4 id: 3670 unit: def export_coords() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3671 unit: def by_rep_sub() file: modules/pymol/menu.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 3672 unit: def modify_by_object() file: modules/pymol/menu.py start line: 0 end line: 0 size: 9 LOC McCabe index: 5 number of parameters: 3 id: 3673 unit: def map_volume() file: modules/pymol/menu.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3674 unit: def map_slice() file: modules/pymol/menu.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3675 unit: def ramp_color() file: modules/pymol/menu.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3676 unit: def scene_menu() file: modules/pymol/menu.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 3677 unit: def set_wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3678 unit: def set_wizard_stack() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3679 unit: def dirty_wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3680 unit: def get_wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3681 unit: def get_wizard_stack() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3682 unit: def interpret() file: modules/pymol/completing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 5 number of parameters: 3 id: 3683 unit: def combine_fragment() file: modules/pymol/editor.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 5 id: 3684 unit: def __init__() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 2 id: 3685 unit: def get_qtwindow() file: modules/pymol/gui.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 3686 unit: def get_vis() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3687 unit: def set_vis() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3688 unit: def get_colorection() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3689 unit: def set_colorection() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3690 unit: def del_colorection() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3691 unit: def dirty() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3692 unit: def get_movie_locked() file: modules/pymol/querying.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3693 unit: def get_object_color_index() file: modules/pymol/querying.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3694 unit: def get_legal_name() file: modules/pymol/querying.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3695 unit: def start() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 3696 unit: def complete() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 9 LOC McCabe index: 6 number of parameters: 1 id: 3697 unit: def get_partial_charge() file: modules/chempy/tinker/keyword.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3698 unit: def update_index() file: modules/chempy/models.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3699 unit: def add_atom() file: modules/chempy/models.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3700 unit: def match_1v1_b() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 3701 unit: def match_1v1_n() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 5 id: 3702 unit: def match_Nv1_n() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 5 id: 3703 unit: def get_single() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3704 unit: def get_angle() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 3705 unit: def check_sum() file: modules/chempy/protein_mmff.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 3706 unit: def get_col_idx_opt() file: modules/chempy/cif.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 3707 unit: def read_atom_site() file: modules/chempy/cif.py start line: 0 end line: 0 size: 9 LOC McCabe index: 6 number of parameters: 1 id: 3708 unit: def read_chem_comp_bond() file: modules/chempy/cif.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 3709 unit: def get_optimize_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 3 id: 3710 unit: def get_prop_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 3711 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 9 LOC McCabe index: 3 number of parameters: 3 id: 3712 unit: def get() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 9 LOC McCabe index: 4 number of parameters: 3 id: 3713 unit: void TextSetPos2i() file: layer1/Text.cpp start line: 238 end line: 245 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3714 unit: static void TextSetPos3f() file: layer1/Text.cpp start line: 247 end line: 254 size: 8 LOC McCabe index: 1 number of parameters: 4 id: 3715 unit: void TextSetColor() file: layer1/Text.cpp start line: 256 end line: 263 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3716 unit: void TextSetColorFromUColor() file: layer1/Text.cpp start line: 310 end line: 317 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3717 unit: int PTryLockAPIAndUnblock() file: layer1/P.cpp start line: 2748 end line: 2755 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3718 unit: void PDefineFloat() file: layer1/P.cpp start line: 2763 end line: 2770 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3719 unit: void SceneCleanupStereo() file: layer1/Scene.cpp start line: 762 end line: 769 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3720 unit: void SceneGetCenter() file: layer1/Scene.cpp start line: 876 end line: 886 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3721 unit: void SceneTranslate() file: layer1/Scene.cpp start line: 1043 end line: 1050 size: 8 LOC McCabe index: 1 number of parameters: 4 id: 3722 unit: void SceneSetMatrix() file: layer1/Scene.cpp start line: 1327 end line: 1334 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3723 unit: void SceneRovingDirty() file: layer1/Scene.cpp start line: 2130 end line: 2138 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3724 unit: int SceneObjectIsActive() file: layer1/Scene.cpp start line: 2488 end line: 2495 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3725 unit: float SceneGetScreenVertexScale() file: layer1/Scene.cpp start line: 4483 end line: 4496 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3726 unit: void SceneSetFogUniforms() file: layer1/Scene.cpp start line: 6855 end line: 6862 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3727 unit: void SettingPurgeDefault() file: layer1/Setting.cpp start line: 129 end line: 136 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3728 unit: int RepGetAutoShowMask() file: layer1/Rep.cpp start line: 130 end line: 137 size: 8 LOC McCabe index: 4 number of parameters: 1 id: 3729 unit: void CharacterRenderOpenGLDone() file: layer1/Character.cpp start line: 216 end line: 224 size: 8 LOC McCabe index: 7 number of parameters: 2 id: 3730 unit: int CharacterGetWidth() file: layer1/Character.cpp start line: 302 end line: 309 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3731 unit: int CharacterGetHeight() file: layer1/Character.cpp start line: 376 end line: 383 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3732 unit: static void RayApplyContextToNormal() file: layer1/Ray.cpp start line: 206 end line: 213 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3733 unit: static float fmodpos() file: layer1/Ray.cpp start line: 281 end line: 288 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3734 unit: void RayGetTTT() file: layer1/Ray.cpp start line: 7660 end line: 7667 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3735 unit: int ViewElemXtoFrame() file: layer1/View.cpp start line: 98 end line: 105 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 3736 unit: int ButModeGet() file: layer1/ButMode.cpp start line: 82 end line: 89 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3737 unit: void ButModeSet() file: layer1/ButMode.cpp start line: 91 end line: 98 size: 8 LOC McCabe index: 5 number of parameters: 3 id: 3738 unit: void ButModeResetRate() file: layer1/ButMode.cpp start line: 131 end line: 138 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3739 unit: void OrthoSetLoopRect() file: layer1/Ortho.cpp start line: 226 end line: 233 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3740 unit: void OrthoExecDeferred() file: layer1/Ortho.cpp start line: 241 end line: 250 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3741 unit: int OrthoGetWidth() file: layer1/Ortho.cpp start line: 259 end line: 266 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3742 unit: int OrthoGetHeight() file: layer1/Ortho.cpp start line: 268 end line: 275 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3743 unit: std::string OrthoCommandOut() file: layer1/Ortho.cpp start line: 441 end line: 448 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3744 unit: void OrthoKeyControl() file: layer1/Ortho.cpp start line: 763 end line: 775 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3745 unit: void OrthoKeyCmmd() file: layer1/Ortho.cpp start line: 778 end line: 790 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3746 unit: void OrthoKeyCtSh() file: layer1/Ortho.cpp start line: 793 end line: 805 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3747 unit: void OrthoInvalidateDoDraw() file: layer1/Ortho.cpp start line: 2815 end line: 2822 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3748 unit: void WizardFree() file: layer1/Wizard.cpp start line: 1028 end line: 1035 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3749 unit: inline bool PConvArgsFromPyList() file: layer1/PConvArgs.h start line: 140 end line: 147 size: 8 LOC McCabe index: 5 number of parameters: 6 id: 3750 unit: static void ColladaBeginPolylistElement() file: layer1/COLLADA.cpp start line: 576 end line: 584 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3751 unit: void ShakerReset() file: layer1/Shaker.cpp start line: 47 end line: 54 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3752 unit: void ObjectPurge() file: layer1/PyMOLObject.cpp start line: 1165 end line: 1172 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3753 unit: void set_s() file: layer1/Setting.h start line: 91 end line: 98 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3754 unit: bool CMovie::fastDraw() file: layer1/Movie.cpp start line: 1828 end line: 1835 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3755 unit: void SceneSetPrepareViewPortForStereo() file: layer1/SceneRender.cpp start line: 1229 end line: 1236 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3756 unit: void resize() file: layer0/vla.h start line: 108 end line: 115 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3757 unit: void UtilCopyMem() file: layer0/Util.cpp start line: 234 end line: 242 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3758 unit: void WordMatcherFree() file: layer0/Word.cpp start line: 562 end line: 569 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3759 unit: void WordListFreeP() file: layer0/Word.cpp start line: 621 end line: 628 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3760 unit: int CShaderPrg::Set1i() file: layer0/ShaderPrg.cpp start line: 228 end line: 235 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3761 unit: int CShaderPrg::Set3f() file: layer0/ShaderPrg.cpp start line: 237 end line: 244 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 3762 unit: int CShaderPrg::Set2f() file: layer0/ShaderPrg.cpp start line: 246 end line: 253 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3763 unit: int CShaderPrg::Set4f() file: layer0/ShaderPrg.cpp start line: 284 end line: 291 size: 8 LOC McCabe index: 2 number of parameters: 5 id: 3764 unit: int CShaderPrg::Set1f() file: layer0/ShaderPrg.cpp start line: 293 end line: 300 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3765 unit: void CShaderPrg::SetAttrib4fLocation() file: layer0/ShaderPrg.cpp start line: 314 end line: 321 size: 8 LOC McCabe index: 3 number of parameters: 5 id: 3766 unit: void CShaderPrg::SetAttrib1fLocation() file: layer0/ShaderPrg.cpp start line: 323 end line: 330 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3767 unit: void CShaderPrg::Set_AnaglyphMode() file: layer0/ShaderPrg.cpp start line: 384 end line: 393 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3768 unit: static void disableGeometryShaders() file: layer0/ShaderMgr.cpp start line: 255 end line: 263 size: 8 LOC McCabe index: 4 number of parameters: 1 id: 3769 unit: void getGLVersion() file: layer0/ShaderMgr.cpp start line: 834 end line: 844 size: 8 LOC McCabe index: 3 number of parameters: 3 id: 3770 unit: void CShaderMgr::Reload_Derivatives() file: layer0/ShaderMgr.cpp start line: 1662 end line: 1671 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3771 unit: void CShaderMgr::freeGPUBuffers() file: layer0/ShaderMgr.cpp start line: 1744 end line: 1751 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3772 unit: void CShaderMgr::bindOffscreenFBO() file: layer0/ShaderMgr.cpp start line: 1875 end line: 1882 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3773 unit: void renderBuffer_t::genBuffer() file: layer0/GenericBuffer.cpp start line: 15 end line: 22 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 3774 unit: void tex::env() file: layer0/GenericBuffer.cpp start line: 168 end line: 175 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3775 unit: void get_system2f3f() file: layer0/Vector.cpp start line: 229 end line: 236 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3776 unit: void scatter3f() file: layer0/Vector.cpp start line: 248 end line: 255 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3777 unit: void identity44f() file: layer0/Vector.cpp start line: 328 end line: 335 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3778 unit: void identity44d() file: layer0/Vector.cpp start line: 337 end line: 344 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3779 unit: double determinant33f() file: layer0/Vector.cpp start line: 400 end line: 407 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3780 unit: void initializeTTT44f() file: layer0/Vector.cpp start line: 815 end line: 822 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3781 unit: void remove_component3d() file: layer0/Vector.cpp start line: 1353 end line: 1361 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3782 unit: static void write_data_to_buffer() file: layer0/MyPNG.cpp start line: 139 end line: 146 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3783 unit: bool bufferData() file: layer0/GenericBuffer.h start line: 251 end line: 258 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 3784 unit: void bufferSubData() file: layer0/GenericBuffer.h start line: 274 end line: 282 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 3785 unit: void MatrixTransformC44f4f() file: layer0/Matrix.cpp start line: 954 end line: 961 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3786 unit: void IsosurfFieldFree() file: layer0/Isosurf.cpp start line: 408 end line: 415 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3787 unit: __inline__ static double inline_diff3f() file: layer0/Vector.h start line: 438 end line: 445 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3788 unit: __inline__ static void inline_remove_component3f() file: layer0/Vector.h start line: 522 end line: 530 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3789 unit: template static bool isStructZero() file: layerCTest/Test.h start line: 17 end line: 24 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3790 unit: template static bool hasAllSpecialMemberFunctions() file: layerCTest/Test.h start line: 41 end line: 48 size: 8 LOC McCabe index: 5 number of parameters: 0 id: 3791 unit: void OVOneToOne_Purge() file: ov/src/OVOneToOne.cpp start line: 42 end line: 49 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3792 unit: static void OVHeap_HashAdd() file: ov/src/OVHeap.cpp start line: 249 end line: 257 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3793 unit: int ChampMatch_1V1_B() file: contrib/champ/champ.c start line: 1902 end line: 1909 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3794 unit: int ChampMatch_1V1_N() file: contrib/champ/champ.c start line: 1911 end line: 1918 size: 8 LOC McCabe index: 1 number of parameters: 5 id: 3795 unit: void ChampMatchFree() file: contrib/champ/champ.c start line: 2051 end line: 2058 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3796 unit: static void remove_component3f() file: contrib/champ/champ.c start line: 4314 end line: 4322 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3797 unit: void OSMemoryHashAdd() file: contrib/champ/os_memory.c start line: 133 end line: 141 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3798 unit: static int write_gro_structure() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 203 end line: 212 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3799 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 729 end line: 736 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3800 unit: static int fio_fclose() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 123 end line: 130 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3801 unit: void vtf_set_coordinate_userdata() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 132 end line: 139 size: 8 LOC McCabe index: 3 number of parameters: 3 id: 3802 unit: float situs_voxel_value_safe() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 186 end line: 193 size: 8 LOC McCabe index: 7 number of parameters: 7 id: 3803 unit: static void close_parm7_read() file: contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp start line: 139 end line: 146 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3804 unit: static int vtkgetstrcmp() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 106 end line: 113 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 3805 unit: static int write_xbgf_structure() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 340 end line: 347 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3806 unit: static void scale() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 649 end line: 656 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3807 unit: static void eatline() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 835 end line: 842 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3808 unit: void write_scalar_type() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1660 end line: 1672 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3809 unit: void add_comment() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2353 end line: 2363 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3810 unit: void add_obj_info() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2374 end line: 2384 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3811 unit: int matches_rule_name() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 3290 end line: 3299 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3812 unit: static int read_pdbx_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1392 end line: 1400 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3813 unit: static void close_file_write() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1138 end line: 1145 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3814 unit: static int inthash() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 45 end line: 54 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3815 unit: double assembleDouble() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 150 end line: 157 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3816 unit: uint32_t lobytes() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 233 end line: 240 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3817 unit: uint32_t hibytes() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 245 end line: 252 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3818 unit: void get_int32() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 628 end line: 635 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3819 unit: void get_uint32() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 636 end line: 643 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3820 unit: int StkReader::next() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1084 end line: 1091 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3821 unit: ssize_t DtrReader::times() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1184 end line: 1191 size: 8 LOC McCabe index: 3 number of parameters: 3 id: 3822 unit: static int vmd_file_is_executable() file: contrib/uiuc/plugins/molfile_plugin/src/vmddir.h start line: 96 end line: 104 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3823 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp start line: 486 end line: 493 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3824 unit: static int put_trx_int() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1474 end line: 1485 size: 8 LOC McCabe index: 5 number of parameters: 2 id: 3825 unit: static void close_avsfield_read() file: contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp start line: 544 end line: 552 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3826 unit: float edm_voxel_value_safe() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 282 end line: 289 size: 8 LOC McCabe index: 7 number of parameters: 7 id: 3827 unit: static int readtoeoln() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 112 end line: 122 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3828 unit: static int write_pqr_atom() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 177 end line: 186 size: 8 LOC McCabe index: 1 number of parameters: 6 id: 3829 unit: static void close_pqr_read() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 337 end line: 344 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3830 unit: virtual void set_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 912 end line: 919 size: 8 LOC McCabe index: 5 number of parameters: 1 id: 3831 unit: virtual void set_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 942 end line: 949 size: 8 LOC McCabe index: 5 number of parameters: 1 id: 3832 unit: virtual void set_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 973 end line: 980 size: 8 LOC McCabe index: 5 number of parameters: 1 id: 3833 unit: void predict_blockbody() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1210 end line: 1217 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3834 unit: void MMTF_parser_put_entity() file: contrib/mmtf-c/mmtf_parser.cpp start line: 869 end line: 876 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3835 unit: void BondTypeInit2() file: layer2/AtomInfo.cpp start line: 171 end line: 178 size: 8 LOC McCabe index: 1 number of parameters: 4 id: 3836 unit: int AtomInfoSameChainP() file: layer2/AtomInfo.cpp start line: 2133 end line: 2140 size: 8 LOC McCabe index: 5 number of parameters: 3 id: 3837 unit: static key_type make_key() file: layer2/CifBondDict.h start line: 34 end line: 44 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3838 unit: static int ObjectCallbackStateFromPyObject() file: layer2/ObjectCallback.cpp start line: 228 end line: 236 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3839 unit: bool is_excluded_chain() file: layer2/CifMoleculeReader.cpp start line: 113 end line: 122 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3840 unit: static void ObjectMeshStateFree() file: layer2/ObjectMesh.cpp start line: 299 end line: 306 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3841 unit: static void DistSetStrip() file: layer2/DistSet.cpp start line: 498 end line: 505 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3842 unit: int CoordSet::atmToIdx() file: layer2/CoordSet.cpp start line: 65 end line: 72 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3843 unit: int CoordSetGetAtomVertex() file: layer2/CoordSet.cpp start line: 667 end line: 676 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3844 unit: int CoordSetSetAtomVertex() file: layer2/CoordSet.cpp start line: 707 end line: 716 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3845 unit: void RepEllipsoidFree() file: layer2/RepEllipsoid.cpp start line: 41 end line: 48 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3846 unit: void ObjectGadgetUpdate() file: layer2/ObjectGadget.cpp start line: 434 end line: 441 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3847 unit: static bool isspecial() file: layer2/CifFile.cpp start line: 71 end line: 78 size: 8 LOC McCabe index: 6 number of parameters: 1 id: 3848 unit: bool cif_array::is_missing_all() file: layer2/CifFile.cpp start line: 146 end line: 155 size: 8 LOC McCabe index: 3 number of parameters: 0 id: 3849 unit: template std::vector to_vector() file: layer2/CifFile.h start line: 118 end line: 125 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 3850 unit: static void addXYtoVertex() file: layer2/RepLabel.cpp start line: 150 end line: 157 size: 8 LOC McCabe index: 1 number of parameters: 6 id: 3851 unit: int ObjectMapValidXtal() file: layer2/ObjectMap.cpp start line: 130 end line: 137 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3852 unit: static void ObjectMapUpdate() file: layer2/ObjectMap.cpp start line: 1807 end line: 1814 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3853 unit: PyMOLreturn_status PyMOL_CmdCenter() file: layer5/PyMOL.cpp start line: 829 end line: 836 size: 8 LOC McCabe index: 1 number of parameters: 6 id: 3854 unit: int PyMOL_GetClickReady() file: layer5/PyMOL.cpp start line: 2773 end line: 2780 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3855 unit: int PyMOL_GetImageReady() file: layer5/PyMOL.cpp start line: 2859 end line: 2866 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3856 unit: void PyMOL_SetInterrupt() file: layer5/PyMOL.cpp start line: 2998 end line: 3005 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3857 unit: PyMOLreturn_status PyMOL_ZoomScene() file: layer5/PyMOL.cpp start line: 3361 end line: 3368 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3858 unit: void MainFlushAsync() file: layer5/main.cpp start line: 182 end line: 189 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3859 unit: void MainSceneGetSize() file: layer5/main.cpp start line: 203 end line: 210 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3860 unit: static void PopUpDetachRecursiveChild() file: layer4/PopUp.cpp start line: 335 end line: 343 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3861 unit: static void PopUpFreeRecursiveChild() file: layer4/PopUp.cpp start line: 409 end line: 416 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3862 unit: static void APIExitBlocked() file: layer4/Cmd.cpp start line: 255 end line: 263 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3863 unit: int MaeExportGetBondStyle() file: layer3/MaeExportHelpers.cpp start line: 83 end line: 93 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 3864 unit: static void MovieSceneRecallMessage() file: layer3/MovieScene.cpp start line: 309 end line: 320 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3865 unit: static float get_scene_animation_duration() file: layer3/MovieScene.cpp start line: 351 end line: 360 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3866 unit: void EditorDihedralInvalid() file: layer3/Editor.cpp start line: 141 end line: 148 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3867 unit: int EditorGetNFrag() file: layer3/Editor.cpp start line: 323 end line: 330 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3868 unit: int EditorDraggingObjectMatrix() file: layer3/Editor.cpp start line: 2096 end line: 2103 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3869 unit: void MoleculeExporter::beginObject() file: layer3/MoleculeExporter.cpp start line: 267 end line: 275 size: 8 LOC McCabe index: 3 number of parameters: 0 id: 3870 unit: void init() file: layer3/MoleculeExporter.cpp start line: 434 end line: 443 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3871 unit: void beginObject() file: layer3/MoleculeExporter.cpp start line: 515 end line: 524 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 3872 unit: void init() file: layer3/MoleculeExporter.cpp start line: 580 end line: 593 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3873 unit: int PlugIOManagerFree() file: layer3/PlugIOManager.cpp start line: 118 end line: 125 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3874 unit: def __init__() file: create_shadertext.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3875 unit: Date.prototype.toJSON = function() file: modules/web/javascript/json2.js start line: 170 end line: 178 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3876 unit: this._send = function() file: modules/web/javascript/pymol.js start line: 131 end line: 138 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 3877 unit: def doSaveAs() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3878 unit: def _() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 1 id: 3879 unit: def _file_save() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3880 unit: def Dialog() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3881 unit: def run_job() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3882 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3883 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3884 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3885 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3886 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3887 unit: def update_display() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3888 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3889 unit: def makeFragmentButton() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 3890 unit: def grow() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 5 id: 3891 unit: def replace() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 5 id: 3892 unit: def cycleBond() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3893 unit: def invert() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3894 unit: def fix() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3895 unit: def rest() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3896 unit: def find_first() file: modules/pmg_qt/syntax/python.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 3 id: 3897 unit: void getU() file: modules/cealign/src/tnt/jama_svd.h start line: 466 end line: 476 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3898 unit: void destroy() file: modules/cealign/src/tnt/tnt_matrix.h start line: 153 end line: 165 size: 8 LOC McCabe index: 5 number of parameters: 0 id: 3899 unit: Subscript dim() file: modules/cealign/src/tnt/tnt_matrix.h start line: 328 end line: 335 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3900 unit: inline reference operator() file: modules/cealign/src/tnt/tnt_matrix.h start line: 361 end line: 368 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 3901 unit: inline const_reference operator() file: modules/cealign/src/tnt/tnt_matrix.h start line: 370 end line: 377 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 3902 unit: Vector diag() file: modules/cealign/src/tnt/tnt_matrix.h start line: 407 end line: 416 size: 8 LOC McCabe index: 3 number of parameters: 0 id: 3903 unit: inline Matrix mult_eq() file: modules/cealign/src/tnt/tnt_matrix.h start line: 695 end line: 703 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3904 unit: void insert_base_one() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 153 end line: 160 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 3905 unit: inline void Stopwatch::resume() file: modules/cealign/src/tnt/tnt_stopwatch.h start line: 72 end line: 79 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 3906 unit: void getU() file: modules/cealign/src/tnt/tnt_linalg.h start line: 2295 end line: 2305 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3907 unit: void initialize() file: modules/cealign/src/tnt/tnt_vector.h start line: 73 end line: 83 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3908 unit: inline reference operator() file: modules/cealign/src/tnt/tnt_vector.h start line: 256 end line: 263 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 3909 unit: inline const_reference operator() file: modules/cealign/src/tnt/tnt_vector.h start line: 265 end line: 272 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 3910 unit: double norm() file: modules/cealign/src/tnt/tnt_vector.h start line: 430 end line: 438 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3911 unit: Array2D Array2D::copy() file: modules/cealign/src/tnt/tnt_array2d.h start line: 316 end line: 326 size: 8 LOC McCabe index: 3 number of parameters: 0 id: 3912 unit: def _open() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 3913 unit: def display() file: modules/pmg_tk/skins/normal/ModalWindow.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 3914 unit: def createDataArea() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3915 unit: def file_save_png() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3916 unit: def file_save_wrl() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3917 unit: def file_save_dae() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3918 unit: def file_save_pov() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3919 unit: def run_job() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3920 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3921 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3922 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3923 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3924 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3925 unit: def update_display() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3926 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3927 unit: def replace() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 5 id: 3928 unit: def grow() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 5 id: 3929 unit: def grow() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 5 id: 3930 unit: def invert() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3931 unit: def fix() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3932 unit: def rest() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3933 unit: def run() file: modules/pmg_tk/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3934 unit: def update_state() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3935 unit: def remove_point() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3936 unit: def redraw() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3937 unit: def canvas_get_position() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3938 unit: def onmousewheel() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3939 unit: def pack() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3940 unit: def initializeTk_colors_common() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3941 unit: def _errorpop() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3942 unit: def _copy_image() file: modules/pymol/internal.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3943 unit: def as_pathstr() file: modules/pymol/cmd.py start line: 0 end line: 0 size: 8 LOC McCabe index: 6 number of parameters: 1 id: 3944 unit: def write_html_ref() file: modules/pymol/cmd.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 1 id: 3945 unit: def new_window() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3946 unit: def back_search() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 8 LOC McCabe index: 5 number of parameters: 2 id: 3947 unit: def ep_special() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 7 id: 3948 unit: def check_gromacs_trj_magic() file: modules/pymol/importing.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 1 id: 3949 unit: def get_default_user_plugin_path() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 3950 unit: def addmenuitemqt() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3951 unit: def __init__() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 3952 unit: def populate_repositories() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3953 unit: def repo_changed() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3954 unit: def move_path_up() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3955 unit: def move_path_down() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 3956 unit: def __init__() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3957 unit: def list() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3958 unit: def modernize_rendering() file: modules/pymol/util.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3959 unit: def get_progress() file: modules/pymol/monitoring.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3960 unit: def delay_launch() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3961 unit: def neighbor_submenu() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3962 unit: def set_mode() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3963 unit: def delete_all() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3964 unit: def set_rep() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3965 unit: def set_dep() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3966 unit: def get_panel() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3967 unit: def load_state_dict() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 1 id: 3968 unit: def __exit__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 4 id: 3969 unit: def _colortype() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3970 unit: def ligand_cartoon() file: modules/pymol/preset.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3971 unit: def ligand_sites_mesh() file: modules/pymol/preset.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3972 unit: def ligand_sites_dots() file: modules/pymol/preset.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3973 unit: def _get_index() file: modules/pymol/setting.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 1 id: 3974 unit: def get_setting_updates() file: modules/pymol/setting.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3975 unit: def _() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 3976 unit: def measure_text() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 11 id: 3977 unit: def __init__() file: modules/pymol/parser.py start line: 0 end line: 0 size: 8 LOC McCabe index: 5 number of parameters: 2 id: 3978 unit: def copy_image() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3979 unit: def assign_atom_types() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 5 id: 3980 unit: def measurement_color() file: modules/pymol/menu.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3981 unit: def vacuum() file: modules/pymol/menu.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3982 unit: def find() file: modules/pymol/menu.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3983 unit: def rpcRenderCGO() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 3984 unit: def rpcDeleteObject() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3985 unit: def send_error() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3986 unit: def stop() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3987 unit: def htmlspecialchars() file: modules/pymol/colorprinting.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3988 unit: def super() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 24 id: 3989 unit: def get_pwg_options() file: modules/pymol/invocation.py start line: 0 end line: 0 size: 8 LOC McCabe index: 5 number of parameters: 1 id: 3990 unit: def get_unused_name() file: modules/pymol/querying.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 3991 unit: def get_modal_draw() file: modules/pymol/querying.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3992 unit: def get_drag_object_name() file: modules/pymol/querying.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3993 unit: def get_color_index() file: modules/pymol/querying.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 3994 unit: def __init__() file: modules/chempy/bmin/state.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 3995 unit: def index_atom() file: modules/chempy/models.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3996 unit: def add_atom() file: modules/chempy/models.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 3997 unit: def reset() file: modules/chempy/fast/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 3998 unit: def insert_pattern_string() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 3999 unit: def match_1v1_map() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 5 id: 4000 unit: def match_1vN_n() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 4001 unit: def generate() file: modules/chempy/protein.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 5 id: 4002 unit: def toFile() file: modules/chempy/lst.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 4 id: 4003 unit: def random_sphere() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 4004 unit: def get_col_idx() file: modules/chempy/cif.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 4005 unit: def read_struct_conn() file: modules/chempy/cif.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 4006 unit: def read_geom_bond() file: modules/chempy/cif.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 4007 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 4008 unit: def __init__() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 4009 unit: def test2a() file: modules/chempy/cex.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 4010 unit: def test3() file: modules/chempy/cex.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 4011 unit: def __init__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 4 id: 4012 unit: def __init__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 4013 unit: def lineEditUpdated() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 4014 unit: static void TextUpdateUColor() file: layer1/Text.cpp start line: 75 end line: 81 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4015 unit: void TextSetScreenWorldOffset() file: layer1/Text.cpp start line: 195 end line: 201 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4016 unit: void TextDrawChar() file: layer1/Text.cpp start line: 438 end line: 444 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4017 unit: static bool check_wrapper_scope() file: layer1/P.cpp start line: 384 end line: 392 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4018 unit: int PAlterAtom() file: layer1/P.cpp start line: 1344 end line: 1350 size: 7 LOC McCabe index: 2 number of parameters: 7 id: 4019 unit: void GridGetRayViewport() file: layer1/Scene.cpp start line: 187 end line: 193 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4020 unit: int SceneMustDrawBoth() file: layer1/Scene.cpp start line: 307 end line: 313 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4021 unit: void SceneAbortAnimation() file: layer1/Scene.cpp start line: 369 end line: 375 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4022 unit: void SceneGetCardInfo() file: layer1/Scene.cpp start line: 859 end line: 865 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4023 unit: int SceneGetNFrame() file: layer1/Scene.cpp start line: 889 end line: 895 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4024 unit: int SceneGetFrame() file: layer1/Scene.cpp start line: 1943 end line: 1949 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4025 unit: static void SceneNoteMouseInteraction() file: layer1/Scene.cpp start line: 3495 end line: 3501 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4026 unit: float SceneGetLineWidthForCylinders() file: layer1/Scene.cpp start line: 7058 end line: 7069 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4027 unit: void ScenePushModelViewMatrix() file: layer1/Scene.cpp start line: 7071 end line: 7078 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4028 unit: static void SettingUniqueFree() file: layer1/Setting.cpp start line: 605 end line: 611 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4029 unit: int SettingGetIndex() file: layer1/Setting.cpp start line: 1846 end line: 1854 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4030 unit: bool ScrollBar::isMaxed() file: layer1/ScrollBar.cpp start line: 25 end line: 31 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4031 unit: void ScrollBar::setBox() file: layer1/ScrollBar.cpp start line: 346 end line: 352 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4032 unit: void RaySetContext() file: layer1/Ray.cpp start line: 136 end line: 142 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4033 unit: static void VectorHash_Free() file: layer1/Ray.cpp start line: 1659 end line: 1665 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4034 unit: void CRay::wobble() file: layer1/Ray.cpp start line: 6631 end line: 6637 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4035 unit: void CRay::color3fv() file: layer1/Ray.cpp start line: 6663 end line: 6669 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4036 unit: void RaySetTTT() file: layer1/Ray.cpp start line: 7652 end line: 7658 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4037 unit: void RayAdjustZtoScreenZofPoint() file: layer1/Ray.cpp start line: 7836 end line: 7842 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4038 unit: void SeqSetRowVLA() file: layer1/Seq.cpp start line: 770 end line: 776 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4039 unit: void SymmetryFree() file: layer1/Symmetry.cpp start line: 175 end line: 182 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4040 unit: template void SettingSet() file: layer1/PyMOLObject.h start line: 183 end line: 189 size: 7 LOC McCabe index: 3 number of parameters: 4 id: 4041 unit: int ButModeGetHeight() file: layer1/ButMode.cpp start line: 72 end line: 78 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4042 unit: int ControlRocking() file: layer1/Control.cpp start line: 218 end line: 224 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4043 unit: int ControlIdling() file: layer1/Control.cpp start line: 399 end line: 405 size: 7 LOC McCabe index: 4 number of parameters: 1 id: 4044 unit: void OrthoFeedbackIn() file: layer1/Ortho.cpp start line: 474 end line: 480 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4045 unit: void OrthoDetach() file: layer1/Ortho.cpp start line: 1236 end line: 1242 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4046 unit: void PConvFloatToPyObjAttr() file: layer1/PConv.cpp start line: 499 end line: 505 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4047 unit: void PConvIntToPyObjAttr() file: layer1/PConv.cpp start line: 507 end line: 513 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4048 unit: void PConvStringToPyObjAttr() file: layer1/PConv.cpp start line: 515 end line: 521 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4049 unit: inline bool PConvArgsFromPyList() file: layer1/PConvArgs.h start line: 131 end line: 137 size: 7 LOC McCabe index: 4 number of parameters: 5 id: 4050 unit: int ObjectMotionGetLength() file: layer1/PyMOLObject.cpp start line: 58 end line: 64 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4051 unit: void ObjectUseColor() file: layer1/PyMOLObject.cpp start line: 1191 end line: 1197 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4052 unit: void ObjectUseColorCGO() file: layer1/PyMOLObject.cpp start line: 1199 end line: 1205 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4053 unit: bool SettingGetIfDefined() file: layer1/Setting.h start line: 369 end line: 375 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4054 unit: bool SettingUniqueGetTypedValuePtr() file: layer1/Setting.h start line: 405 end line: 411 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 4055 unit: void MovieFlushCommands() file: layer1/Movie.cpp start line: 322 end line: 328 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4056 unit: static void MovieModalDraw() file: layer1/Movie.cpp start line: 879 end line: 885 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4057 unit: void MovieDrawViewElem() file: layer1/Movie.cpp start line: 1820 end line: 1826 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4058 unit: void MovieSetScrollBarFrame() file: layer1/Movie.cpp start line: 1944 end line: 1950 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4059 unit: void AppendCopyWithChangedShader() file: layer1/SceneRender.cpp start line: 530 end line: 536 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 4060 unit: std::size_t size() file: layer0/vla.h start line: 116 end line: 122 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4061 unit: void freeP() file: layer0/vla.h start line: 130 end line: 136 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4062 unit: int ErrMessage() file: layer0/Err.cpp start line: 32 end line: 40 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4063 unit: void UtilNConcat() file: layer0/Util.cpp start line: 142 end line: 148 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4064 unit: void UtilZeroMem() file: layer0/Util.cpp start line: 226 end line: 232 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4065 unit: int UtilSemiSortFloatIndexWithNBins() file: layer0/Util.cpp start line: 406 end line: 412 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 4066 unit: void Block::setMargin() file: layer0/Block.cpp start line: 98 end line: 104 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4067 unit: void Block::reshape() file: layer0/Block.cpp start line: 107 end line: 113 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4068 unit: void Block::translate() file: layer0/Block.cpp start line: 116 end line: 122 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4069 unit: int CShaderPrg::Disable() file: layer0/ShaderPrg.cpp start line: 160 end line: 166 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 4070 unit: int CShaderPrg::IsLinked() file: layer0/ShaderPrg.cpp start line: 168 end line: 174 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4071 unit: int CShaderPrg::SetMat3fc() file: layer0/ShaderPrg.cpp start line: 258 end line: 264 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4072 unit: int CShaderPrg::SetMat4fc() file: layer0/ShaderPrg.cpp start line: 269 end line: 275 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4073 unit: void p_glutMainLoop() file: layer0/os_gl.cpp start line: 151 end line: 158 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4074 unit: void CShaderMgr::AddVBOsToFree() file: layer0/ShaderMgr.cpp start line: 1000 end line: 1006 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4075 unit: void CShaderMgr::ResetUniformSet() file: layer0/ShaderMgr.cpp start line: 1403 end line: 1409 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4076 unit: void renderTarget_t::bind() file: layer0/GenericBuffer.cpp start line: 466 end line: 472 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4077 unit: void mix3f() file: layer0/Vector.cpp start line: 72 end line: 78 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4078 unit: void mix3d() file: layer0/Vector.cpp start line: 80 end line: 86 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4079 unit: int pymol_roundf() file: layer0/Vector.cpp start line: 98 end line: 104 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4080 unit: void get_random3f() file: layer0/Vector.cpp start line: 200 end line: 206 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4081 unit: void normalize4f() file: layer0/Vector.cpp start line: 1729 end line: 1735 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4082 unit: void add4f() file: layer0/Vector.cpp start line: 2105 end line: 2111 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4083 unit: static long fgetsize() file: layer0/File.cpp start line: 21 end line: 27 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4084 unit: static void read_data_from_file() file: layer0/MyPNG.cpp start line: 152 end line: 158 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4085 unit: static void write_data_to_file() file: layer0/MyPNG.cpp start line: 164 end line: 170 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4086 unit: void unbind() file: layer0/GenericBuffer.h start line: 488 end line: 494 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4087 unit: inline void LexAssign() file: layer0/Lex.h start line: 35 end line: 41 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4088 unit: void MatrixTranslateC44f() file: layer0/Matrix.cpp start line: 906 end line: 912 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4089 unit: void MatrixTransformC44f3f() file: layer0/Matrix.cpp start line: 944 end line: 950 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4090 unit: void MatrixInvTransformC44fAs33f3f() file: layer0/Matrix.cpp start line: 966 end line: 974 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4091 unit: void MatrixTransformC44fAs33f3f() file: layer0/Matrix.cpp start line: 978 end line: 984 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4092 unit: void FieldZero() file: layer0/Field.cpp start line: 453 end line: 459 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4093 unit: __inline__ static double inline_sqrt1f() file: layer0/Vector.h start line: 401 end line: 407 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4094 unit: __inline__ static double inline_sqrt1d() file: layer0/Vector.h start line: 409 end line: 415 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4095 unit: inline int WordMatchExact() file: layer0/Word.h start line: 159 end line: 165 size: 7 LOC McCabe index: 3 number of parameters: 4 id: 4096 unit: inline int WordMatchExact() file: layer0/Word.h start line: 167 end line: 173 size: 7 LOC McCabe index: 5 number of parameters: 4 id: 4097 unit: void OVOneToAny_Purge() file: ov/src/OVOneToAny.cpp start line: 41 end line: 47 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4098 unit: void OVOneToAny_Del() file: ov/src/OVOneToAny.cpp start line: 49 end line: 55 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4099 unit: void OVOneToOne_Del() file: ov/src/OVOneToOne.cpp start line: 51 end line: 57 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4100 unit: void _OVHeap_Del() file: ov/src/OVHeap.cpp start line: 68 end line: 74 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4101 unit: void ChampPreparePattern() file: contrib/champ/champ.c start line: 1175 end line: 1181 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4102 unit: BOOL APIENTRY DllMain() file: contrib/uiuc/plugins/include/vmdplugin.h start line: 72 end line: 78 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4103 unit: static int read_pbeq_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp start line: 229 end line: 236 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4104 unit: static void close_pbeq_read() file: contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp start line: 295 end line: 302 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4105 unit: static void close_car_read() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 382 end line: 388 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4106 unit: static int read_first_frame() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 2116 end line: 2131 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4107 unit: static void close_gro_write() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 258 end line: 264 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4108 unit: void vtf_set_timestep_userdata() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 123 end line: 129 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4109 unit: static int read_situs_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 123 end line: 130 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4110 unit: static void close_situs_read() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 155 end line: 162 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4111 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp start line: 228 end line: 234 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4112 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp start line: 299 end line: 305 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4113 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c start line: 156 end line: 162 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4114 unit: static int read_brix_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp start line: 196 end line: 203 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4115 unit: static void close_brix_read() file: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp start line: 280 end line: 287 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4116 unit: static int read_biomocca_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp start line: 124 end line: 131 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4117 unit: static void close_biomocca_read() file: contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp start line: 159 end line: 166 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4118 unit: static int read_vtk_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 262 end line: 269 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4119 unit: static void close_vtk_read() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 407 end line: 414 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4120 unit: static void close_parm_read() file: contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp start line: 114 end line: 120 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4121 unit: static void identity() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 575 end line: 581 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4122 unit: static float norm() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 690 end line: 696 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4123 unit: static void js_blockio_check_and_set() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 221 end line: 227 size: 7 LOC McCabe index: 4 number of parameters: 1 id: 4124 unit: static int read_grid_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp start line: 158 end line: 165 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4125 unit: static void close_grid_read() file: contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp start line: 201 end line: 208 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4126 unit: static int read_ccp4_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp start line: 450 end line: 457 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4127 unit: static int read_spider_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp start line: 264 end line: 271 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4128 unit: static void close_spider_read() file: contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp start line: 295 end line: 302 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4129 unit: static int read_dx_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 224 end line: 231 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4130 unit: static void close_dx_read() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 336 end line: 343 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4131 unit: void ply_get_element() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 904 end line: 910 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4132 unit: void get_info_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1286 end line: 1293 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4133 unit: void get_element_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2664 end line: 2670 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4134 unit: static void writeFile() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1266 end line: 1273 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4135 unit: std::string str() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 599 end line: 605 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 4136 unit: uint64_t label_size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1789 end line: 1795 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4137 unit: uint64_t scalar_size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1797 end line: 1803 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4138 unit: uint64_t field_size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1804 end line: 1810 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4139 unit: static molfile_ssize_t read_times() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2239 end line: 2245 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4140 unit: static int write_bgf_structure() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 294 end line: 300 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4141 unit: static void getatomfield() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 302 end line: 308 size: 7 LOC McCabe index: 29 number of parameters: 2 id: 4142 unit: static int write_mol2_structure() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 336 end line: 342 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4143 unit: static void next_elem() file: contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp start line: 42 end line: 48 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4144 unit: static int get_line() file: contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp start line: 51 end line: 57 size: 7 LOC McCabe index: 3 number of parameters: 4 id: 4145 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1233 end line: 1242 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4146 unit: static void close_file_write() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1346 end line: 1354 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4147 unit: static int mdio_close() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 386 end line: 395 size: 7 LOC McCabe index: 4 number of parameters: 1 id: 4148 unit: static int put_trx_real() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 1489 end line: 1497 size: 7 LOC McCabe index: 4 number of parameters: 2 id: 4149 unit: static int write_xyz_structure() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 216 end line: 222 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4150 unit: static void close_xyz_write() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 252 end line: 258 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4151 unit: static int read_fs4_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp start line: 247 end line: 254 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4152 unit: static void close_fs4_read() file: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp start line: 303 end line: 310 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4153 unit: static int read_plt_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp start line: 124 end line: 131 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4154 unit: static void close_plt_read() file: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp start line: 154 end line: 161 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4155 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp start line: 220 end line: 226 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4156 unit: static int read_avsfield_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp start line: 472 end line: 479 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4157 unit: static int read_edm_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 194 end line: 201 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4158 unit: static int read_dsn6_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp start line: 183 end line: 190 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4159 unit: static void close_dsn6_read() file: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp start line: 283 end line: 290 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4160 unit: static int read_phi_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp start line: 175 end line: 182 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4161 unit: static void close_phi_read() file: contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp start line: 228 end line: 235 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4162 unit: static int read_xsf_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 838 end line: 845 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4163 unit: static void close_cor_read() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 357 end line: 363 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4164 unit: void ReadPARM::get_parm_bond() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 925 end line: 932 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4165 unit: static int read_cube_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 476 end line: 483 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4166 unit: static int read_map_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp start line: 156 end line: 163 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4167 unit: static void close_map_read() file: contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp start line: 192 end line: 199 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4168 unit: static int read_grd_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp start line: 207 end line: 214 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4169 unit: static void close_grd_read() file: contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp start line: 238 end line: 245 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4170 unit: void set_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1069 end line: 1075 size: 7 LOC McCabe index: 4 number of parameters: 1 id: 4171 unit: void insert_row() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1076 end line: 1082 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4172 unit: void write_meta() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1326 end line: 1332 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4173 unit: static int read_uhbd_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp start line: 218 end line: 225 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4174 unit: static void close_uhbd_read() file: contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp start line: 311 end line: 318 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4175 unit: void MMTF_Entity_destroy() file: contrib/mmtf-c/mmtf_parser.cpp start line: 321 end line: 327 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4176 unit: void MMTF_parser_put_string() file: contrib/mmtf-c/mmtf_parser.cpp start line: 738 end line: 744 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4177 unit: void BondTypeInit() file: layer2/AtomInfo.cpp start line: 160 end line: 166 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4178 unit: int AtomInfoSameSegmentP() file: layer2/AtomInfo.cpp start line: 2142 end line: 2148 size: 7 LOC McCabe index: 4 number of parameters: 3 id: 4179 unit: bool cap() file: layer2/RepCartoon.cpp start line: 2807 end line: 2814 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4180 unit: static T VLAGetFirstNonNULL() file: layer2/CifMoleculeReader.cpp start line: 180 end line: 186 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4181 unit: inline bool find1() file: layer2/CifMoleculeReader.cpp start line: 193 end line: 199 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4182 unit: bool hasRep() file: layer2/CoordSet.h start line: 63 end line: 69 size: 7 LOC McCabe index: 4 number of parameters: 1 id: 4183 unit: void RepWireBondFree() file: layer2/RepWireBond.cpp start line: 230 end line: 236 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4184 unit: static int AtomInfoIsMasked() file: layer2/RepSurface.cpp start line: 254 end line: 260 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4185 unit: static void RepLabelAdjustScreenZ() file: layer2/RepLabel.cpp start line: 142 end line: 148 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4186 unit: void drawLine2DCheckZTargetCross() file: layer2/RepLabel.cpp start line: 395 end line: 401 size: 7 LOC McCabe index: 2 number of parameters: 10 id: 4187 unit: void RepCylBondFree() file: layer2/RepCylBond.cpp start line: 107 end line: 113 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4188 unit: static void SculptCacheCheck() file: layer2/SculptCache.cpp start line: 33 end line: 39 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4189 unit: void SculptCacheFree() file: layer2/SculptCache.cpp start line: 64 end line: 70 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4190 unit: void RepNonbondedFree() file: layer2/RepNonbonded.cpp start line: 43 end line: 49 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4191 unit: CC_INLINE static PyMOLstatus get_status_ok() file: layer5/PyMOL.cpp start line: 239 end line: 245 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4192 unit: static OVreturn_word get_rep_id() file: layer5/PyMOL.cpp start line: 860 end line: 867 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4193 unit: OVreturn_word get_setting_id() file: layer5/PyMOL.cpp start line: 869 end line: 875 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4194 unit: static OVreturn_word get_clip_id() file: layer5/PyMOL.cpp start line: 877 end line: 883 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4195 unit: static OVreturn_word get_reinit_id() file: layer5/PyMOL.cpp start line: 885 end line: 891 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4196 unit: static OVreturn_word get_select_list_mode() file: layer5/PyMOL.cpp start line: 893 end line: 899 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4197 unit: int PyMOL_GetProgressChanged() file: layer5/PyMOL.cpp start line: 1951 end line: 1957 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4198 unit: static void _PyMOL_Config() file: layer5/PyMOL.cpp start line: 1996 end line: 2003 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4199 unit: void PyMOL_Key() file: layer5/PyMOL.cpp start line: 2492 end line: 2498 size: 7 LOC McCabe index: 2 number of parameters: 5 id: 4200 unit: void PyMOL_Reshape() file: layer5/PyMOL.cpp start line: 2536 end line: 2544 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4201 unit: int PyMOL_GetPassive() file: layer5/PyMOL.cpp start line: 2941 end line: 2947 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4202 unit: int PyMOL_GetSwap() file: layer5/PyMOL.cpp start line: 2961 end line: 2967 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4203 unit: int PyMOL_GetBusy() file: layer5/PyMOL.cpp start line: 2969 end line: 2975 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4204 unit: static OVreturn_word get_button_code() file: layer5/PyMOL.cpp start line: 3332 end line: 3338 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4205 unit: static OVreturn_word get_button_mod_code() file: layer5/PyMOL.cpp start line: 3339 end line: 3345 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4206 unit: static OVreturn_word get_button_action_code() file: layer5/PyMOL.cpp start line: 3346 end line: 3352 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4207 unit: static OVreturn_word get_mouse_mode() file: layer5/PyMOL.cpp start line: 3353 end line: 3359 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4208 unit: PyMOLreturn_status PyMOL_TranslateScene() file: layer5/PyMOL.cpp start line: 3370 end line: 3376 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4209 unit: static OVreturn_word get_palette() file: layer5/PyMOL.cpp start line: 3380 end line: 3386 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4210 unit: void MainSetWindowPosition() file: layer5/main.cpp start line: 1351 end line: 1357 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4211 unit: static void launch_library_singleton() file: layer4/Cmd.cpp start line: 139 end line: 145 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 4212 unit: void ExportCoordsFree() file: layer4/Export.cpp start line: 149 end line: 155 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4213 unit: void ExportDeleteMDebug() file: layer4/Export.cpp start line: 220 end line: 226 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4214 unit: bool nextStateInPrevObject() file: layer3/AtomIterators.h start line: 109 end line: 115 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 4215 unit: void EditorReadyDrag() file: layer3/Editor.cpp start line: 1810 end line: 1816 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4216 unit: void MoleculeExporter::endCoordSet() file: layer3/MoleculeExporter.cpp start line: 296 end line: 302 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4217 unit: void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 720 end line: 727 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 4218 unit: void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 876 end line: 884 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 4219 unit: this._parseBufferMode = function() file: modules/web/javascript/pymol.js start line: 21 end line: 27 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4220 unit: this.flush = function() file: modules/web/javascript/pymol.js start line: 49 end line: 55 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4221 unit: def file_open() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4222 unit: def log_open() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4223 unit: def suspendable() file: modules/pmg_qt/properties_dialog.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4224 unit: def askopenfile() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 7 LOC McCabe index: 4 number of parameters: 3 id: 4225 unit: def load_module() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4226 unit: def mousePressEvent() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4227 unit: def updateFbScale() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4228 unit: def colorDialogClosed() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4229 unit: def VolumePanelDocked() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4230 unit: def undoablemethod() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4231 unit: def finish_sculpting() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4232 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 4233 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 4234 unit: def collectPicked() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4235 unit: def fixH() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4236 unit: def addH() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4237 unit: def clear() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4238 unit: def BuilderPanelDocked() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4239 unit: void insert() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 136 end line: 143 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4240 unit: void insert_base_one() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 151 end line: 157 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4241 unit: int i_refvec::ref_count() file: modules/cealign/src/tnt/tnt_i_refvec.h start line: 210 end line: 216 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 4242 unit: int isNonsingular() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1379 end line: 1385 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 4243 unit: int isNonsingular() file: modules/cealign/src/tnt/jama_lu.h start line: 155 end line: 161 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 4244 unit: void destroy() file: modules/cealign/src/tnt/tnt_vector.h start line: 140 end line: 150 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4245 unit: def file_save_mpng() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4246 unit: def cat_terms() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4247 unit: def takedown() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4248 unit: def finish_sculpting() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4249 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 4250 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 4251 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 7 id: 4252 unit: def cycleBond() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4253 unit: def fixH() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4254 unit: def addH() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4255 unit: def collectPicked() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4256 unit: def __init__() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4257 unit: def onconfig() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4258 unit: def create_line_va() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 4259 unit: def canvas_remove_point() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4260 unit: def text_dialog() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4261 unit: def MakeAtom() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4262 unit: def _validate_color_sc() file: modules/pymol/internal.py start line: 0 end line: 0 size: 7 LOC McCabe index: 4 number of parameters: 1 id: 4263 unit: def _fake_drag() file: modules/pymol/internal.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4264 unit: def mvprg_remove_last() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4265 unit: def recent_filenames() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4266 unit: def run_file() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4267 unit: def OnPaint() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4268 unit: def OnOpen() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4269 unit: def _unicode() file: modules/pymol/diagnosing.py start line: 0 end line: 0 size: 7 LOC McCabe index: 5 number of parameters: 1 id: 4270 unit: def set_startup_path() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4271 unit: def clear_plugins() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4272 unit: def add_path() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4273 unit: def is_supported() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 7 LOC McCabe index: 5 number of parameters: 2 id: 4274 unit: def sum_formal_charges() file: modules/pymol/util.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4275 unit: def sum_partial_charges() file: modules/pymol/util.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4276 unit: def cba() file: modules/pymol/util.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4277 unit: def cbh() file: modules/pymol/util.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4278 unit: def callback() file: modules/pymol/util.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4279 unit: def set_input_arg() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4280 unit: def run_cpu() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4281 unit: def get_panel() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4282 unit: def neighbor_objects() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 7 LOC McCabe index: 4 number of parameters: 2 id: 4283 unit: def neighbor_selections() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 7 LOC McCabe index: 4 number of parameters: 2 id: 4284 unit: def delete_all() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4285 unit: def undo() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4286 unit: def redo() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4287 unit: def get_prompt() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4288 unit: def __init__() file: modules/pymol/wizard/pseudoatom.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 6 id: 4289 unit: def set_mode() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4290 unit: def set_c_cap() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4291 unit: def set_n_cap() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4292 unit: def set_hyd() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4293 unit: def get_prompt() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4294 unit: def do_pick() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 4295 unit: def indicate() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4296 unit: def do_select() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4297 unit: def adjust() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 7 LOC McCabe index: 4 number of parameters: 3 id: 4298 unit: def get_prompt() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4299 unit: def get_sess() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4300 unit: def electro() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4301 unit: def check_same_object() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4302 unit: def check_different_object() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4303 unit: def __init__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 4 id: 4304 unit: def prime_pymol() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 4305 unit: def tri_normal() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4306 unit: def new_parse_closure() file: modules/pymol/parser.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4307 unit: def __call__() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 4 number of parameters: 3 id: 4308 unit: def measurement_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4309 unit: def measurement_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4310 unit: def by_ss() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4311 unit: def by_rep() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4312 unit: def hydrogens() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4313 unit: def sequence() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4314 unit: def modify_by_sele() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 3 id: 4315 unit: def include() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4316 unit: def mol_align() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4317 unit: def mol_view() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4318 unit: def main_pseudoatom_sub() file: modules/pymol/menu.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4319 unit: def send_resp_header() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 4320 unit: def start() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 7 LOC McCabe 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index: 5 number of parameters: 2 id: 4328 unit: def get_free_valence() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4329 unit: def fromFile() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4330 unit: def toFile() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 4 id: 4331 unit: def __init__() file: modules/chempy/map.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 4332 unit: def pattern_free() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4333 unit: def pattern_clear_tags() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4334 unit: def pattern_get_string() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4335 unit: def pattern_get_string_with_names() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4336 unit: def insert_model() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4337 unit: def list_prepend_pattern_strings() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4338 unit: def list_prepend_pattern_index() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4339 unit: def list_new() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4340 unit: def list_free() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 4341 unit: def list_get_pattern_indices() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4342 unit: def list_get_pattern_strings() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4343 unit: def memory_dump() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4344 unit: def pattern_get_cycle() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4345 unit: def pattern_get_class() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4346 unit: def pattern_get_codes() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4347 unit: def pattern_get_tag_masks() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4348 unit: def pattern_get_tags() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4349 unit: def pattern_get_ext_indices_with_tags() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4350 unit: def pattern_get_atom_symbols() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4351 unit: def pattern_get_atom_names() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4352 unit: def pattern_dump() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4353 unit: def pattern_orient_bonds() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4354 unit: def pattern_detect_chirality() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4355 unit: def pattern_generalize() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4356 unit: def strip_atom_bonds() file: modules/chempy/protein.py start line: 0 end line: 0 size: 7 LOC McCabe index: 4 number of parameters: 1 id: 4357 unit: def set() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 4 id: 4358 unit: def random_vector() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 4359 unit: def get_system2() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4360 unit: def configure_legacy_dump() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 4361 unit: def toFile() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 4 id: 4362 unit: def next() file: modules/chempy/cif.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4363 unit: def _row_get() file: modules/chempy/cif.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 4 id: 4364 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 4365 unit: def __init__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 4366 unit: def __str__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 4367 unit: void BasisCylinderSausagePrecompute() file: layer1/Basis.cpp start line: 3678 end line: 3683 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4368 unit: void TextIndent() file: layer1/Text.cpp start line: 138 end line: 143 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4369 unit: void TextSetPos() file: layer1/Text.cpp start line: 145 end line: 150 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4370 unit: void TextSetWorldPos() file: layer1/Text.cpp start line: 152 end line: 157 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4371 unit: void TextDrawStrAt() file: layer1/Text.cpp start line: 425 end line: 430 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4372 unit: void PFree() file: layer1/P.cpp start line: 2349 end line: 2354 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4373 unit: void PBlock() file: layer1/P.cpp start line: 2579 end line: 2587 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4374 unit: void PUnlockAPI() file: layer1/P.cpp start line: 2731 end line: 2736 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4375 unit: void SceneInvalidate() file: layer1/Scene.cpp start line: 445 end line: 450 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4376 unit: void SceneGetWidthHeight() file: layer1/Scene.cpp start line: 810 end line: 815 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4377 unit: void SceneUpdateStereoMode() file: layer1/Scene.cpp start line: 1002 end line: 1007 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4378 unit: static void SceneComposeModelViewMatrix() file: layer1/Scene.cpp start line: 4408 end line: 4413 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4379 unit: short SceneGetVisible() file: layer1/Scene.cpp start line: 4436 end line: 4441 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4380 unit: float SceneGetDepth() file: layer1/Scene.cpp start line: 4469 end line: 4474 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4381 unit: void SceneRovingChanged() file: layer1/Scene.cpp start line: 4498 end line: 4503 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4382 unit: static int SceneDeferredClick() file: layer1/Scene.cpp start line: 5662 end line: 5667 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4383 unit: void SceneResetMatrix() file: layer1/Scene.cpp start line: 5845 end line: 5850 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4384 unit: void SceneObjectUpdateThread() file: layer1/Scene.cpp start line: 6320 end line: 6325 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4385 unit: static void SceneRestartPerfTimer() file: layer1/Scene.cpp start line: 6886 end line: 6891 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4386 unit: void SceneApplyMatrix() file: layer1/Scene.cpp start line: 6987 end line: 6999 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4387 unit: void SceneScale() file: layer1/Scene.cpp start line: 7003 end line: 7008 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4388 unit: void SettingFreeP() file: layer1/Setting.cpp start line: 1483 end line: 1488 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4389 unit: void SettingInit() file: layer1/Setting.cpp start line: 1492 end line: 1497 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4390 unit: int ScrollBar::release() file: layer1/ScrollBar.cpp start line: 332 end line: 337 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4391 unit: void ScrollBar::setLimits() file: layer1/ScrollBar.cpp start line: 339 end line: 344 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4392 unit: float CharacterGetAdvance() file: layer1/Character.cpp start line: 197 end line: 202 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4393 unit: int FontInit() file: layer1/Font.cpp start line: 21 end line: 26 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4394 unit: static void fill() file: layer1/Ray.cpp start line: 257 end line: 263 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4395 unit: static void add4ucf() file: layer1/Ray.cpp start line: 267 end line: 272 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4396 unit: static void copy4fuc() file: layer1/Ray.cpp start line: 274 end line: 279 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4397 unit: void SeqDirty() file: layer1/Seq.cpp start line: 166 end line: 171 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4398 unit: void SeqChanged() file: layer1/Seq.cpp start line: 173 end line: 178 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4399 unit: void SeqFree() file: layer1/Seq.cpp start line: 778 end line: 784 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4400 unit: static void FontTypeFree() file: layer1/FontType.cpp start line: 533 end line: 538 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4401 unit: void SymmetryClear() file: layer1/Symmetry.cpp start line: 184 end line: 189 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4402 unit: void SymmetryUpdate() file: layer1/Symmetry.cpp start line: 221 end line: 226 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4403 unit: void OrthoDefer() file: layer1/Ortho.cpp start line: 252 end line: 257 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4404 unit: void OrthoFakeDrag() file: layer1/Ortho.cpp start line: 279 end line: 284 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4405 unit: void OrthoSetWizardPrompt() file: layer1/Ortho.cpp start line: 289 end line: 294 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4406 unit: void OrthoBusyMessage() file: layer1/Ortho.cpp start line: 515 end line: 520 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4407 unit: void OrthoCommandIn() file: layer1/Ortho.cpp start line: 2715 end line: 2720 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4408 unit: void WizardDirty() file: layer1/Wizard.cpp start line: 86 end line: 91 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4409 unit: void TypeFree() file: layer1/TypeFace.cpp start line: 139 end line: 144 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4410 unit: inline bool _PConvArgsFromPyList_GetItem() file: layer1/PConvArgs.h start line: 105 end line: 111 size: 6 LOC McCabe index: 2 number of parameters: 6 id: 4411 unit: inline bool PConvArgsFromPyList() file: layer1/PConvArgs.h start line: 123 end line: 128 size: 6 LOC McCabe index: 3 number of parameters: 4 id: 4412 unit: static void ColladaWriteVCountElement() file: layer1/COLLADA.cpp start line: 506 end line: 511 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4413 unit: static void ColladaWritePrimitiveElement() file: layer1/COLLADA.cpp start line: 535 end line: 540 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4414 unit: void ObjectMotionTrim() file: layer1/PyMOLObject.cpp start line: 51 end line: 56 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4415 unit: void ObjectDrawViewElem() file: layer1/PyMOLObject.cpp start line: 224 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size: 6 LOC McCabe index: 4 number of parameters: 2 id: 4423 unit: int UtilInit() file: layer0/Util.cpp start line: 30 end line: 35 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4424 unit: static void ReleaseMember() file: layer0/Tracker.cpp start line: 138 end line: 143 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4425 unit: int WordMatchCommaInt() file: layer0/Word.cpp start line: 941 end line: 946 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4426 unit: void FeedbackFree() file: layer0/Feedback.cpp start line: 62 end line: 69 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4427 unit: inline size_t length() file: layer0/os_python.h start line: 80 end line: 85 size: 6 LOC McCabe index: 3 number of parameters: 0 id: 4428 unit: template void destroy() file: layer0/LangUtil.h start line: 33 end line: 38 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4429 unit: int CShaderPrg::DisableARB() file: layer0/ShaderPrg.cpp start line: 132 end line: 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file: layer0/ShaderMgr.cpp start line: 342 end line: 347 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4437 unit: int CShaderMgr::RemoveShaderPrg() file: layer0/ShaderMgr.cpp start line: 943 end line: 948 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4438 unit: void CShaderMgr::RegisterDependantFileNames() file: layer0/ShaderMgr.cpp start line: 1605 end line: 1610 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4439 unit: void PixmapPurge() file: layer0/Pixmap.cpp start line: 224 end line: 229 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4440 unit: void dump33d() file: layer0/Vector.cpp start line: 170 end line: 175 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4441 unit: void copy3d3f() file: layer0/Vector.cpp start line: 269 end line: 274 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4442 unit: void copy3f3d() file: layer0/Vector.cpp start line: 276 end line: 281 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4443 unit: void min3f() file: layer0/Vector.cpp start line: 283 end line: 288 size: 6 LOC McCabe index: 4 number of parameters: 3 id: 4444 unit: void max3f() file: layer0/Vector.cpp start line: 290 end line: 295 size: 6 LOC McCabe index: 4 number of parameters: 3 id: 4445 unit: void scale3d() file: layer0/Vector.cpp start line: 1332 end line: 1337 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4446 unit: void add3d() file: layer0/Vector.cpp start line: 1339 end line: 1344 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4447 unit: void cross_product3d() file: layer0/Vector.cpp start line: 1346 end line: 1351 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4448 unit: void matrix_transform33f3f() file: layer0/Vector.cpp start line: 1787 end line: 1792 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4449 unit: void matrix_inverse_transform33f3f() file: layer0/Vector.cpp start line: 1794 end line: 1799 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4450 unit: void transform3d3f() file: layer0/Vector.cpp start line: 1843 end line: 1848 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4451 unit: void transform33d3f() file: layer0/Vector.cpp start line: 1850 end line: 1855 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4452 unit: void mult4f() file: layer0/Vector.cpp start line: 2070 end line: 2075 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4453 unit: void white4f() file: layer0/Vector.cpp start line: 2099 end line: 2104 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4454 unit: void MapCacheFree() file: layer0/Map.cpp start line: 107 end line: 112 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4455 unit: void CalculateTriangleNormal() file: layer0/Triangle.cpp start line: 2407 end line: 2412 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4456 unit: unsigned int VLAGetSize() file: layer0/MemoryDebug.cpp start line: 149 end line: 154 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4457 unit: double d_sign() file: layer0/Matrix.cpp start line: 1683 end line: 1688 size: 6 LOC McCabe index: 3 number of parameters: 2 id: 4458 unit: void copy4() file: layer0/Vector.h start line: 361 end line: 366 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4459 unit: void VLAFreeP() file: layer0/MemoryDebug.h start line: 125 end line: 130 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4460 unit: OVstatus OVOneToAny_Init() file: ov/src/OVOneToAny.cpp start line: 26 end line: 31 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4461 unit: OVstatus OVOneToOne_Init() file: ov/src/OVOneToOne.cpp start line: 27 end line: 32 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4462 unit: int ListGetNAlloc() file: contrib/champ/list.c start line: 115 end line: 121 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4463 unit: int ListElemPushInt() file: contrib/champ/list.c start line: 145 end line: 150 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4464 unit: int ListElemPopInt() file: contrib/champ/list.c start line: 152 end line: 157 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4465 unit: int ListElemGetInt() file: contrib/champ/list.c start line: 159 end line: 164 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4466 unit: static double sqrt1f() file: contrib/champ/champ.c start line: 4284 end line: 4289 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4467 unit: static double length3f() file: contrib/champ/champ.c start line: 4291 end line: 4296 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4468 unit: static void subtract3f() file: contrib/champ/champ.c start line: 4329 end line: 4334 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4469 unit: static void cross_product3f() file: contrib/champ/champ.c start line: 4336 end line: 4341 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4470 unit: void ChampAtomDump() file: contrib/champ/champ.c start line: 4468 end line: 4473 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4471 unit: void err_fatal() file: contrib/champ/err2.c start line: 20 end line: 25 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4472 unit: int err_message() file: contrib/champ/err2.c start line: 27 end line: 32 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4473 unit: unsigned int VLAGetSize2() file: contrib/champ/vla.c start line: 106 end line: 111 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4474 unit: static void close_file_write() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 558 end line: 563 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4475 unit: static int read_timestep_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 660 end line: 666 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4476 unit: static void close_gro_read() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 171 end line: 176 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4477 unit: static fio_size_t fio_fseek() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 585 end line: 590 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4478 unit: void vtf_set_atom_userdata() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 115 end line: 120 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4479 unit: static void vtf_error() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 145 end line: 157 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4480 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 1285 end line: 1290 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4481 unit: static void close_file_write() file: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c start line: 215 end line: 220 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4482 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 487 end line: 492 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4483 unit: static void close_tinker_read() file: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c start line: 156 end line: 161 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4484 unit: static void close_ccp4_read() file: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp start line: 674 end line: 680 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4485 unit: void copy_comments_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2546 end line: 2552 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4486 unit: void copy_obj_info_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2586 end line: 2592 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4487 unit: static bool readBonds() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1155 end line: 1160 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4488 unit: static void writeBuffer() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1309 end line: 1314 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4489 unit: static int write_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1421 end line: 1426 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4490 unit: ssize_t StkReader::size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1077 end line: 1082 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4491 unit: static void vmd_closedir() file: contrib/uiuc/plugins/molfile_plugin/src/vmddir.h start line: 88 end line: 93 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4492 unit: static void vmd_closedir() file: contrib/uiuc/plugins/molfile_plugin/src/vmddir.h start line: 137 end line: 142 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4493 unit: static int WFK_read_volumetric_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1122 end line: 1128 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4494 unit: static int WFK_read_volumetric_data() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1131 end line: 1137 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4495 unit: static void close_xyz_read() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 189 end line: 194 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4496 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 738 end line: 744 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4497 unit: static void close_edm_read() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 250 end line: 256 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4498 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp start line: 269 end line: 276 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4499 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 154 end line: 159 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4500 unit: static void close_file_write() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 221 end line: 226 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4501 unit: static bool xsf_read_cell() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 242 end line: 247 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4502 unit: static int read_timestep_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 402 end line: 408 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4503 unit: static int get_pqr_coordinates() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 154 end line: 160 size: 6 LOC McCabe index: 2 number of parameters: 4 id: 4504 unit: static float get_atom_radius() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 165 end line: 172 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4505 unit: static void close_pqr_write() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 417 end line: 422 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4506 unit: void array_copy_bigendian_4() file: contrib/mmtf-c/mmtf_parser.cpp start line: 353 end line: 358 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4507 unit: void array_copy_bigendian_2() file: contrib/mmtf-c/mmtf_parser.cpp start line: 361 end line: 366 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4508 unit: void MMTF_parser_put_bioAssembly() file: contrib/mmtf-c/mmtf_parser.cpp start line: 893 end line: 898 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4509 unit: void MMTF_parser_put_transform() file: contrib/mmtf-c/mmtf_parser.cpp start line: 901 end line: 906 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4510 unit: def is_conda_env() file: setup.py start line: 0 end line: 0 size: 6 LOC McCabe index: 4 number of parameters: 0 id: 4511 unit: def finalize_options() file: setup.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4512 unit: def copy_tree_nosvn() file: setup.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4513 unit: int AtomInfoCheckUniqueID() file: layer2/AtomInfo.cpp start line: 146 end line: 151 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4514 unit: int AtomInfoCheckUniqueBondID() file: layer2/AtomInfo.cpp start line: 153 end line: 158 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4515 unit: void AtomInfoFree() file: layer2/AtomInfo.cpp start line: 191 end line: 196 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4516 unit: static char getInscodeUpper() file: layer2/AtomInfo.cpp start line: 809 end line: 814 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4517 unit: static int AtomInfoNameCompare() file: layer2/AtomInfo.cpp start line: 1954 end line: 1959 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4518 unit: int AtomInfoSameResidueP() file: layer2/AtomInfo.cpp start line: 2126 end line: 2131 size: 6 LOC McCabe index: 3 number of parameters: 3 id: 4519 unit: V AtomSettingGetWD() file: layer2/AtomInfo.h start line: 494 end line: 499 size: 6 LOC McCabe index: 2 number of parameters: 4 id: 4520 unit: mapped_type get() file: layer2/CifBondDict.h start line: 51 end line: 56 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4521 unit: static void AtomInfoSetEntityId() file: layer2/CifMoleculeReader.cpp start line: 216 end line: 222 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4522 unit: static void ColorsAdjustAlpha() file: layer2/ObjectVolume.cpp start line: 644 end line: 649 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4523 unit: static void ObjectGroupFree() file: layer2/ObjectGroup.cpp start line: 72 end line: 77 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4524 unit: template void SettingSet() file: layer2/CoordSet.h start line: 212 end line: 217 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4525 unit: inline char getInscode() file: layer2/AtomInfoHistory.h start line: 98 end line: 103 size: 6 LOC McCabe index: 4 number of parameters: 0 id: 4526 unit: inline char getInscode() file: layer2/AtomInfoHistory.h start line: 174 end line: 179 size: 6 LOC McCabe index: 4 number of parameters: 0 id: 4527 unit: static void setShaderCGO() file: layer2/RepSurface.cpp start line: 79 end line: 84 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4528 unit: static void setPickingCGO() file: layer2/RepSurface.cpp start line: 86 end line: 91 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4529 unit: static void tolowerinplace() file: layer2/CifFile.cpp start line: 81 end line: 86 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4530 unit: void ObjMolPairwiseInit() file: layer2/ObjectMolecule2.cpp start line: 1470 end line: 1475 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4531 unit: void ObjectMapRegeneratePoints() file: layer2/ObjectMap.cpp start line: 1275 end line: 1280 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4532 unit: CC_INLINE static PyMOLreturn_status return_status_ok() file: layer5/PyMOL.cpp start line: 247 end line: 252 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4533 unit: CC_INLINE static PyMOLreturn_status return_status() file: layer5/PyMOL.cpp start line: 254 end line: 259 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4534 unit: PyMOLreturn_status PyMOL_CmdDelete() file: layer5/PyMOL.cpp start line: 797 end line: 802 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4535 unit: PyMOLreturn_status PyMOL_CmdSelect() file: layer5/PyMOL.cpp start line: 927 end line: 932 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4536 unit: PyMOLreturn_status PyMOL_CmdMPlay() file: layer5/PyMOL.cpp start line: 1766 end line: 1771 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4537 unit: void PyMOL_LockAPIAndUnblock() file: layer5/PyMOL.cpp start line: 2222 end line: 2227 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4538 unit: void PyMOL_BlockAndUnlockAPI() file: layer5/PyMOL.cpp start line: 2229 end line: 2234 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4539 unit: int PyMOL_GetModalDraw() file: layer5/PyMOL.cpp start line: 2949 end line: 2954 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4540 unit: void PyMOL_SetBusy() file: layer5/PyMOL.cpp start line: 2977 end line: 2984 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4541 unit: PyMOLreturn_status PyMOL_CmdRock() file: layer5/PyMOL.cpp start line: 3143 end line: 3148 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4542 unit: static void MainPushValidContext() file: layer5/main.cpp start line: 267 end line: 272 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4543 unit: static void MainPopValidContext() file: layer5/main.cpp start line: 274 end line: 279 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4544 unit: int MainSavingUnderWhileIdle() file: layer5/main.cpp start line: 395 end line: 400 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4545 unit: void MovieScenesFree() file: layer3/MovieScene.cpp start line: 754 end line: 759 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4546 unit: void EditorFree() file: layer3/Editor.cpp start line: 2383 end line: 2388 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4547 unit: void MoleculeExporter::beginCoordSet() file: layer3/MoleculeExporter.cpp start line: 277 end line: 283 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4548 unit: void writeENDMDL() file: layer3/MoleculeExporter.cpp start line: 451 end line: 456 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4549 unit: void endCoordSet() file: layer3/MoleculeExporter.cpp start line: 542 end line: 548 size: 6 LOC McCabe index: 3 number of parameters: 0 id: 4550 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 777 end line: 784 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4551 unit: bool isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 886 end line: 895 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4552 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 1257 end line: 1264 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4553 unit: void init() file: layer3/MoleculeExporter.cpp start line: 1549 end line: 1555 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4554 unit: bool has_whitespace() file: layer3/CifDataValueFormatter.cpp start line: 17 end line: 22 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4555 unit: bool has_quotespace() file: layer3/CifDataValueFormatter.cpp start line: 28 end line: 33 size: 6 LOC McCabe index: 4 number of parameters: 2 id: 4556 unit: this.setBufferMode = function() file: modules/web/javascript/pymol.js start line: 42 end line: 47 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4557 unit: dispatch: function() file: modules/web/javascript/pymol.js start line: 1085 end line: 1090 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4558 unit: def doOpen() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 2 id: 4559 unit: def _() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 0 id: 4560 unit: def initialdir() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4561 unit: def log_resume() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4562 unit: def settings_edit_all_dialog() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4563 unit: def commandoverloaddecorator() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4564 unit: def askinteger() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 4 id: 4565 unit: def askfloat() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 4 id: 4566 unit: def askstring() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 4 id: 4567 unit: def paintGL() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4568 unit: def enterValue() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 5 id: 4569 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4570 unit: def do_select() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4571 unit: def clean() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4572 unit: def _get_menu() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4573 unit: def deletemenuitems() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 6 LOC McCabe index: 4 number of parameters: 4 id: 4574 unit: def file_save_aln() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4575 unit: Fortran_Array3D Fortran_Array3D::copy() file: modules/cealign/src/tnt/tnt_fortran_array3d.h start line: 149 end line: 156 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4576 unit: Array1D Array1D::copy() file: modules/cealign/src/tnt/tnt_array1d.h start line: 199 end line: 205 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4577 unit: void Array1D::copy_() file: modules/cealign/src/tnt/tnt_array1d.h start line: 288 end line: 294 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4578 unit: Fortran_Array2D Fortran_Array2D::copy() file: modules/cealign/src/tnt/tnt_fortran_array2d.h start line: 145 end line: 152 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4579 unit: void Fortran_Array2D::copy_() file: modules/cealign/src/tnt/tnt_fortran_array2d.h start line: 212 end line: 218 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4580 unit: inline i_refvec::i_refvec() file: modules/cealign/src/tnt/tnt_i_refvec.h start line: 108 end line: 113 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4581 unit: void insert() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 128 end line: 135 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4582 unit: void Stopwatch::start() file: modules/cealign/src/tnt/tnt_stopwatch.h start line: 55 end line: 60 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4583 unit: Fortran_Array1D Fortran_Array1D::copy() file: modules/cealign/src/tnt/tnt_fortran_array1d.h start line: 159 end line: 165 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4584 unit: void Fortran_Array1D::copy_() file: modules/cealign/src/tnt/tnt_fortran_array1d.h start line: 254 end line: 260 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4585 unit: def initialdir() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4586 unit: def buttonAdd() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4587 unit: def destroyButtonArea() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4588 unit: def setup() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4589 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4590 unit: def do_select() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4591 unit: def clean() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4592 unit: def toggleSS() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4593 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 5 id: 4594 unit: def trace_w() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4595 unit: def get_rgb() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4596 unit: def __iter__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4597 unit: def hexcolor() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4598 unit: def bind_hover_events() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4599 unit: def update_canvas_ids() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4600 unit: def vrange() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4601 unit: def amin() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4602 unit: def amax() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4603 unit: def arange() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4604 unit: def plot_hist() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4605 unit: def canvas_set_position() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4606 unit: def update_volume() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4607 unit: def okbutton() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4608 unit: def selectfile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4609 unit: def onResetFilter() file: modules/pmg_tk/SetEditor.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4610 unit: def _cmmd() file: modules/pymol/internal.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 2 id: 4611 unit: def mview() file: modules/pymol/moving.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 19 id: 4612 unit: def complete() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4613 unit: def matrix_copy() file: modules/pymol/editing.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 10 id: 4614 unit: def ep_init() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4615 unit: def ep_char() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 7 id: 4616 unit: def ep_passive_motion() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 6 id: 4617 unit: def ep_wheel() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 7 id: 4618 unit: def OnSize() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4619 unit: def _magic_check_cor_charmm() file: modules/pymol/importing.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4620 unit: def load_ply() file: modules/pymol/importing.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 5 id: 4621 unit: def get_pmgapp() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4622 unit: def check_valid_name() file: modules/pymol/plugins/installation.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4623 unit: def get_citation_required() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4624 unit: def update_startup_paths() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4625 unit: def remove_path() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4626 unit: def manager_dialog() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 4627 unit: def retrieve() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4628 unit: def cbag() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4629 unit: def cbac() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4630 unit: def cbam() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4631 unit: def cbay() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4632 unit: def cbas() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4633 unit: def cbaw() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4634 unit: def cbab() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4635 unit: def cbao() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4636 unit: def cbap() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4637 unit: def cbak() file: modules/pymol/util.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4638 unit: def get_prompt() file: modules/pymol/wizard/toggle.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4639 unit: def set_mode() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4640 unit: def get_event_mask() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4641 unit: def get_prompt() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4642 unit: def set_neighbor_target() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4643 unit: def __init__() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4644 unit: def set_mode() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4645 unit: def cleanup() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4646 unit: def __init__() file: modules/pymol/wizard/renaming.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 4647 unit: def medchem() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4648 unit: def acquire() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4649 unit: def skipIfCircular() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4650 unit: def setWidget() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4651 unit: def __init__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4652 unit: def __init__() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 3 id: 4653 unit: def __init__() file: modules/pymol/headering.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4654 unit: def get_byteorder() file: modules/pymol/headering.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4655 unit: def simple_no_solv() file: modules/pymol/preset.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4656 unit: def ligand_sites_hq() file: modules/pymol/preset.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4657 unit: def pretty() file: modules/pymol/preset.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4658 unit: def publication() file: modules/pymol/preset.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4659 unit: def _() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4660 unit: def parse() file: modules/pymol/parser.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4661 unit: def get_embedded() file: modules/pymol/parser.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4662 unit: def extract() file: modules/pymol/menu.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4663 unit: def camera_store_with_scene() file: modules/pymol/menu.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4664 unit: def show_misc() file: modules/pymol/menu.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4665 unit: def mol_generate() file: modules/pymol/menu.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4666 unit: def test1() file: modules/pymol/menu.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4667 unit: def test2() file: modules/pymol/menu.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4668 unit: def label_ids() file: modules/pymol/menu.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4669 unit: def rpcDeleteAll() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4670 unit: def wrap_return() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 4 id: 4671 unit: def lock_without_glut() file: modules/pymol/locking.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4672 unit: def _rep_to_repmask() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4673 unit: def session_restore_views() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4674 unit: def get_selection_copy_name() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4675 unit: def get_voxel() file: modules/chempy/neighbor.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4676 unit: def mini_threaded() file: modules/chempy/bmin/realtime.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4677 unit: def get_nuclear_charges() file: modules/chempy/models.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4678 unit: def __init__() file: modules/chempy/mae.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4679 unit: def nxt_lin() file: modules/chempy/mae.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4680 unit: def in_same_residue() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 4 number of parameters: 2 id: 4681 unit: def __init__() file: modules/chempy/champ/__init__.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4682 unit: def generate() file: modules/chempy/hetatm.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4683 unit: def normalize() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4684 unit: def normalize_failsafe() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 4685 unit: def translate_array() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4686 unit: def fit_apply() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 4687 unit: def scifloat() file: modules/chempy/cif.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4688 unit: def loopdataiter() file: modules/chempy/cif.py start line: 0 end line: 0 size: 6 LOC McCabe index: 4 number of parameters: 1 id: 4689 unit: def loopkeysiter() file: modules/chempy/cif.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4690 unit: def get_density() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 4 id: 4691 unit: def get_potential() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 4692 unit: def get_charges() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4693 unit: def get_energy() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4694 unit: def get_optimized_energy() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4695 unit: def get_optimized_charges() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 4696 unit: def get_prop_charges() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4697 unit: def _PackedIntBufStrategy() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 4698 unit: def spew() file: modules/chempy/cex.py start line: 0 end line: 0 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 4699 unit: def test() file: modules/chempy/cex.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4700 unit: def test2() file: modules/chempy/cex.py start line: 0 end line: 0 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 4701 unit: def lightingsettings() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 4702 unit: void BasisGetTriangleFlatDotgle() file: layer1/Basis.cpp start line: 1402 end line: 1406 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4703 unit: void BasisGetTriangleFlatDotglePerspective() file: layer1/Basis.cpp start line: 1408 end line: 1412 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4704 unit: void BasisTrianglePrecomputePerspective() file: layer1/Basis.cpp start line: 3672 end line: 3676 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4705 unit: void TextSetIsPicking() file: layer1/Text.cpp start line: 95 end line: 99 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4706 unit: bool TextGetIsPicking() file: layer1/Text.cpp start line: 101 end line: 105 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4707 unit: void TextSetLabelPos() file: layer1/Text.cpp start line: 162 end line: 166 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4708 unit: void TextSetLabelPosIsSet() file: layer1/Text.cpp start line: 174 end line: 178 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4709 unit: unsigned char TextGetLabelPosIsSet() file: layer1/Text.cpp start line: 180 end line: 184 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4710 unit: void TextSetLabelPushPos() file: layer1/Text.cpp start line: 186 end line: 190 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4711 unit: float TextGetWidth() file: layer1/Text.cpp start line: 325 end line: 329 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4712 unit: float TextGetHeight() file: layer1/Text.cpp start line: 331 end line: 335 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4713 unit: void TextSetWidth() file: layer1/Text.cpp start line: 351 end line: 355 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4714 unit: void TextSetHeight() file: layer1/Text.cpp start line: 357 end line: 361 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4715 unit: void TextDrawStr() file: layer1/Text.cpp start line: 432 end line: 436 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4716 unit: float TextGetSpacing() file: layer1/Text.cpp start line: 751 end line: 755 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4717 unit: float TextGetJustification() file: layer1/Text.cpp start line: 756 end line: 760 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4718 unit: void PAutoUnblock() file: layer1/P.cpp start line: 2699 end line: 2703 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4719 unit: void PBlockAndUnlockAPI() file: layer1/P.cpp start line: 2705 end line: 2709 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4720 unit: void PLockAPIAndUnblock() file: layer1/P.cpp start line: 2757 end line: 2761 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4721 unit: void SceneInvalidateStencil() file: layer1/Scene.cpp start line: 232 end line: 236 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4722 unit: int SceneHasImage() file: layer1/Scene.cpp start line: 301 end line: 305 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4723 unit: void SceneUpdateStereo() file: layer1/Scene.cpp start line: 596 end line: 600 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4724 unit: int SceneGetStereo() file: layer1/Scene.cpp start line: 853 end line: 857 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4725 unit: void SceneSuppressMovieFrame() file: layer1/Scene.cpp start line: 867 end line: 871 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4726 unit: void SceneDontCopyNext() file: layer1/Scene.cpp start line: 992 end line: 998 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4727 unit: void SceneGetViewNormal() file: layer1/Scene.cpp start line: 1338 end line: 1342 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4728 unit: float SceneGetGridAspectRatio() file: layer1/Scene.cpp start line: 1780 end line: 1784 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4729 unit: void SceneOriginGet() file: layer1/Scene.cpp start line: 2444 end line: 2448 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4730 unit: int SceneGetButtonMargin() file: layer1/Scene.cpp start line: 3258 end line: 3262 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4731 unit: void ScenePopRasterMatrix() file: layer1/Scene.cpp start line: 4398 end line: 4402 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4732 unit: static int SceneDeferredDrag() file: layer1/Scene.cpp start line: 5774 end line: 5778 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4733 unit: static int SceneDeferredRelease() file: layer1/Scene.cpp start line: 5796 end line: 5800 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4734 unit: int SceneGetDrawFlagGrid() file: layer1/Scene.cpp start line: 6256 end line: 6260 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4735 unit: int SceneRovingCheckDirty() file: layer1/Scene.cpp start line: 6310 end line: 6314 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4736 unit: void SceneRestartFrameTimer() file: layer1/Scene.cpp start line: 6880 end line: 6884 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4737 unit: float GetFovWidth() file: layer1/Scene.cpp start line: 7311 end line: 7315 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4738 unit: void SettingCheckHandle() file: layer1/Setting.cpp start line: 1132 end line: 1136 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4739 unit: int SettingGetName() file: layer1/Setting.cpp start line: 1858 end line: 1862 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4740 unit: void RepInvalidate() file: layer1/Rep.cpp start line: 121 end line: 125 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4741 unit: void CharacterSetRetention() file: layer1/Character.cpp start line: 435 end line: 439 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4742 unit: void RayRenderTest() file: layer1/Ray.cpp start line: 1061 end line: 1066 size: 5 LOC McCabe index: 1 number of parameters: 6 id: 4743 unit: void CPop::reshape() file: layer1/Pop.cpp start line: 36 end line: 40 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4744 unit: void PopFree() file: layer1/Pop.cpp start line: 54 end line: 58 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4745 unit: void SeqSetHandler() file: layer1/Seq.cpp start line: 236 end line: 240 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4746 unit: void ViewFree() file: layer1/View.cpp start line: 569 end line: 573 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4747 unit: int CSymmetry::getNSymMat() file: layer1/Symmetry.cpp start line: 235 end line: 239 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 4748 unit: int getNFrame() file: layer1/PyMOLObject.h start line: 110 end line: 114 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 4749 unit: int ColorGetNColor() file: layer1/Color.cpp start line: 815 end line: 819 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4750 unit: void ControlInterrupt() file: layer1/Control.cpp start line: 409 end line: 414 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4751 unit: void OrthoGetSize() file: layer1/Ortho.cpp start line: 134 end line: 138 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4752 unit: void OrthoGetBackgroundSize() file: layer1/Ortho.cpp start line: 140 end line: 144 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4753 unit: int OrthoGetDirty() file: layer1/Ortho.cpp start line: 214 end line: 218 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4754 unit: int OrthoGetRenderMode() file: layer1/Ortho.cpp start line: 220 end line: 224 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4755 unit: int OrthoDeferredWaiting() file: layer1/Ortho.cpp start line: 235 end line: 239 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4756 unit: int OrthoTextVisible() file: layer1/Ortho.cpp start line: 371 end line: 375 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 4757 unit: int OrthoArrowsGrabbed() file: layer1/Ortho.cpp start line: 380 end line: 385 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4758 unit: void OrthoRemoveAutoOverlay() file: layer1/Ortho.cpp start line: 404 end line: 408 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4759 unit: void OrthoRemoveSplash() file: layer1/Ortho.cpp start line: 412 end line: 416 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4760 unit: int OrthoCommandWaiting() file: layer1/Ortho.cpp start line: 452 end line: 456 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4761 unit: void OrthoGrab() file: layer1/Ortho.cpp start line: 1196 end line: 1200 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4762 unit: int OrthoGrabbedBy() file: layer1/Ortho.cpp start line: 1202 end line: 1206 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4763 unit: void OrthoUngrab() file: layer1/Ortho.cpp start line: 1220 end line: 1224 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4764 unit: void OrthoAttach() file: layer1/Ortho.cpp start line: 1228 end line: 1232 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4765 unit: void TypeFaceFree() file: layer1/TypeFace.cpp start line: 123 end line: 127 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4766 unit: float TypeFaceGetKerning() file: layer1/TypeFace.cpp start line: 157 end line: 161 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4767 unit: static void ColladaBeginGeometryMesh() file: layer1/COLLADA.cpp start line: 323 end line: 327 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4768 unit: static void ColladaWriteTrianglesPolylistElement() file: layer1/COLLADA.cpp start line: 565 end line: 569 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4769 unit: static inline bool byte_check_10xxxxxx() file: layer1/FontGLUT.cpp start line: 64 end line: 68 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4770 unit: void ObjectPurgeSettings() file: layer1/PyMOLObject.cpp start line: 45 end line: 49 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4771 unit: void ObjectToggleRepVis() file: layer1/PyMOLObject.cpp start line: 1115 end line: 1119 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 4772 unit: void ObjectFree() file: layer1/PyMOLObject.cpp start line: 1176 end line: 1180 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4773 unit: void ObjectStatePurge() file: layer1/PyMOLObject.cpp start line: 1307 end line: 1311 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4774 unit: void ObjectStateResetMatrix() file: layer1/PyMOLObject.cpp start line: 1463 end line: 1467 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4775 unit: int SettingUniqueSetTypedValue() file: layer1/Setting.h start line: 139 end line: 143 size: 5 LOC McCabe index: 1 number of parameters: 5 id: 4776 unit: template V SettingGet() file: layer1/Setting.h start line: 354 end line: 358 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4777 unit: void MovieSetRealtime() file: layer1/Movie.cpp start line: 244 end line: 248 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4778 unit: int MovieGetRealtime() file: layer1/Movie.cpp start line: 250 end line: 254 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4779 unit: int MovieLocked() file: layer1/Movie.cpp start line: 428 end line: 432 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4780 unit: void MovieSetLock() file: layer1/Movie.cpp start line: 434 end line: 438 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4781 unit: int MovieDefined() file: layer1/Movie.cpp start line: 1482 end line: 1486 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4782 unit: void UtilStripANSIEscapes() file: layer0/Util.cpp start line: 220 end line: 224 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4783 unit: static void ReleaseInfo() file: layer0/Tracker.cpp start line: 132 end line: 136 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4784 unit: void FeedbackAutoAdd() file: layer0/Feedback.cpp start line: 144 end line: 148 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 4785 unit: bool Block::rectXYInside() file: layer0/Block.cpp start line: 168 end line: 172 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4786 unit: int TetsurfInit() file: layer0/Tetsurf.cpp start line: 389 end line: 393 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4787 unit: void TetsurfFree() file: layer0/Tetsurf.cpp start line: 402 end line: 406 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4788 unit: void p_glutReshapeWindow() file: layer0/os_gl.cpp start line: 196 end line: 200 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4789 unit: void p_glutInitWindowSize() file: layer0/os_gl.cpp start line: 226 end line: 230 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4790 unit: void p_glutReshapeWindow() file: layer0/os_gl.cpp start line: 404 end line: 408 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4791 unit: void p_glutInitWindowSize() file: layer0/os_gl.cpp start line: 435 end line: 439 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4792 unit: void CShaderMgr::bindGPUBuffer() file: layer0/ShaderMgr.cpp start line: 1727 end line: 1731 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4793 unit: void CShaderMgr::bindOffscreenTexture() file: layer0/ShaderMgr.cpp start line: 1908 end line: 1912 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4794 unit: void PixmapFreeP() file: layer0/Pixmap.cpp start line: 231 end line: 235 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4795 unit: int equal3f() file: layer0/Vector.cpp start line: 194 end line: 198 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 4796 unit: void mult3f() file: layer0/Vector.cpp start line: 2064 end line: 2068 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4797 unit: void MemoryZero() file: layer0/MemoryDebug.cpp start line: 70 end line: 74 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4798 unit: void IsosurfFree() file: layer0/Isosurf.cpp start line: 105 end line: 109 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4799 unit: int IsosurfInit() file: layer0/Isosurf.cpp start line: 555 end line: 559 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4800 unit: inline void set3f() file: layer0/Vector.h start line: 299 end line: 303 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4801 unit: inline void zero3() file: layer0/Vector.h start line: 306 end line: 310 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4802 unit: inline void ones3f() file: layer0/Vector.h start line: 315 end line: 319 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4803 unit: inline void invert3f3f() file: layer0/Vector.h start line: 325 end line: 329 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4804 unit: inline void scale3f() file: layer0/Vector.h start line: 335 end line: 339 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4805 unit: void copy3() file: layer0/Vector.h start line: 354 end line: 358 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4806 unit: inline void add3f() file: layer0/Vector.h start line: 373 end line: 377 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4807 unit: inline void subtract3f() file: layer0/Vector.h start line: 379 end line: 383 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4808 unit: inline void average3f() file: layer0/Vector.h start line: 389 end line: 393 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4809 unit: inline void cross_product3f() file: layer0/Vector.h start line: 395 end line: 399 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4810 unit: void CDeferred::exec() file: layer0/Deferred.cpp start line: 5 end line: 9 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 4811 unit: inline int WordCompare() file: layer0/Word.h start line: 141 end line: 145 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 4812 unit: inline int WordMatch() file: layer0/Word.h start line: 147 end line: 151 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 4813 unit: inline int WordMatchNoWild() file: layer0/Word.h start line: 153 end line: 157 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 4814 unit: static bool isArrayZero() file: layerCTest/Test.h start line: 28 end line: 32 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4815 unit: void OVOneToAny_Reset() file: ov/src/OVOneToAny.cpp start line: 57 end line: 61 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4816 unit: void OVOneToOne_Reset() file: ov/src/OVOneToOne.cpp start line: 59 end line: 63 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4817 unit: double genrand_res53() file: ov/src/OVRandom.cpp start line: 230 end line: 234 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4818 unit: void feedback_Free() file: contrib/champ/feedback2.c start line: 38 end line: 43 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4819 unit: static int read_molecule_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 565 end line: 569 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4820 unit: static void close_crd_read() file: contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c start line: 130 end line: 134 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4821 unit: static void close_crd_write() file: contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c start line: 179 end line: 183 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4822 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c start line: 215 end line: 219 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4823 unit: static int read_gro_molecule_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 142 end line: 146 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4824 unit: static void close_g96_read() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 426 end line: 430 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4825 unit: static void close_trr_read() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 511 end line: 515 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4826 unit: static void close_trr_write() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 620 end line: 624 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4827 unit: static void close_situs_write() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 174 end line: 178 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4828 unit: void Set_Colour() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 73 end line: 77 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4829 unit: void ClinComb2() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 81 end line: 85 size: 5 LOC McCabe index: 1 number of parameters: 5 id: 4830 unit: static void close_vaspchgcar_read() file: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c start line: 307 end line: 311 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4831 unit: static int read_xbgf_molecule_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 669 end line: 673 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4832 unit: static void qm_vec_sub() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 682 end line: 686 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4833 unit: static void close_vaspxdatcar_read() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c start line: 291 end line: 295 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4834 unit: static void close_vaspxml_read() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c start line: 228 end line: 232 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4835 unit: static void close_dx_write() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 357 end line: 361 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4836 unit: static void close_vaspparchg_read() file: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c start line: 288 end line: 292 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4837 unit: void ply_close() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1266 end line: 1272 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4838 unit: void start_props_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 3032 end line: 3039 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4839 unit: static inline bool isAtomSite() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1174 end line: 1178 size: 5 LOC McCabe index: 11 number of parameters: 1 id: 4840 unit: static void writeIntro() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1275 end line: 1279 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4841 unit: static void close_pdbx_read() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1402 end line: 1406 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4842 unit: static int write_structure() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1415 end line: 1419 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4843 unit: static void close_file_write() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1428 end line: 1432 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4844 unit: bool StkReader::recognizes() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 970 end line: 974 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 4845 unit: int StkReader::frame() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1102 end line: 1106 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4846 unit: static void close_vaspposcar_read() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 287 end line: 292 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4847 unit: static void close_vaspposcar_write() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 382 end line: 386 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4848 unit: static void close_dlpoly_read() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 676 end line: 680 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4849 unit: static void close_vasp5xdatcar_read() file: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c start line: 248 end line: 253 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4850 unit: static float get_pte_mass() file: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h start line: 102 end line: 107 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4851 unit: static void close_rst_read() file: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c start line: 207 end line: 211 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4852 unit: static void close_rst_write() file: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c start line: 273 end line: 277 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4853 unit: static void close_edm_write() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 268 end line: 272 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4854 unit: static void close_vaspoutcar_read() file: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c start line: 259 end line: 263 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4855 unit: inline char read() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 142 end line: 146 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 4856 unit: bool Tokenizer::not_a() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 423 end line: 427 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4857 unit: Block new_block() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1118 end line: 1122 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4858 unit: void predict_block() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1272 end line: 1276 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4859 unit: int read_timestep_metadata() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1826 end line: 1830 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4860 unit: void MMTF_BioAssembly_destroy() file: contrib/mmtf-c/mmtf_parser.cpp start line: 312 end line: 316 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4861 unit: int AtomInfoKnownPolymerResName() file: layer2/AtomInfo.cpp start line: 586 end line: 590 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4862 unit: bool AtomResiFromResv() file: layer2/AtomInfo.cpp start line: 817 end line: 821 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 4863 unit: void AtomInfoFreeSortedIndexes() file: layer2/AtomInfo.cpp start line: 1927 end line: 1931 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4864 unit: char getInscode() file: layer2/AtomInfo.h start line: 306 end line: 310 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 4865 unit: template void SettingSet() file: layer2/AtomInfo.h start line: 473 end line: 477 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4866 unit: static key_type make_key() file: layer2/CifBondDict.h start line: 61 end line: 65 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4867 unit: void set() file: layer2/CifBondDict.h start line: 98 end line: 102 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4868 unit: void set() file: layer2/RepCartoon.cpp start line: 2795 end line: 2799 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4869 unit: static void ObjectMoleculeAddBond2() file: layer2/CifMoleculeReader.cpp start line: 227 end line: 231 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4870 unit: void assign() file: layer2/CifMoleculeReader.cpp start line: 517 end line: 521 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4871 unit: inline int GetSpecial() file: layer2/ObjectGadgetRamp.cpp start line: 145 end line: 149 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4872 unit: int ObjectGadgetRampInterpolate() file: layer2/ObjectGadgetRamp.cpp start line: 352 end line: 356 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4873 unit: inline bool is_35prime() file: layer2/SideChainHelper.cpp start line: 74 end line: 78 size: 5 LOC McCabe index: 6 number of parameters: 2 id: 4874 unit: inline bool is_C45prime() file: layer2/SideChainHelper.cpp start line: 81 end line: 85 size: 5 LOC McCabe index: 6 number of parameters: 1 id: 4875 unit: void LabPosTypeCopy() file: layer2/CoordSet.cpp start line: 1718 end line: 1722 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4876 unit: int ObjectGroupGetMatrix() file: layer2/ObjectGroup.cpp start line: 110 end line: 114 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4877 unit: int ObjectGroupSetMatrix() file: layer2/ObjectGroup.cpp start line: 116 end line: 120 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4878 unit: void ObjectGadgetFree() file: layer2/ObjectGadget.cpp start line: 414 end line: 418 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4879 unit: inline void copy_attr_s() file: layer2/AtomInfoHistory.h start line: 279 end line: 283 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4880 unit: static void RepSurfaceInvalidate() file: layer2/RepSurface.cpp start line: 2160 end line: 2164 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4881 unit: void AtomInfoTypeConverter::copyN() file: layer2/AtomInfoHistory.cpp start line: 76 end line: 80 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4882 unit: void CopyN_BondType() file: layer2/BondTypeHistory.cpp start line: 25 end line: 29 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4883 unit: static void RepLabelInit() file: layer2/RepLabel.cpp start line: 89 end line: 93 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4884 unit: void glVertex3fTransformed() file: layer2/RepLabel.cpp start line: 327 end line: 331 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4885 unit: static void VFontRecFree() file: layer2/VFont.cpp start line: 258 end line: 262 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4886 unit: void ObjMolPairwisePurge() file: layer2/ObjectMolecule2.cpp start line: 1477 end line: 1481 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4887 unit: int PyMOL_DelG3DStream() file: layer5/PyMOL.cpp start line: 614 end line: 618 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4888 unit: void PyMOL_ResetProgress() file: layer5/PyMOL.cpp start line: 1916 end line: 1920 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4889 unit: void PyMOL_ConfigureShadersGL() file: layer5/PyMOL.cpp start line: 2112 end line: 2116 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4890 unit: void PyMOL_Draw() file: layer5/PyMOL.cpp start line: 2290 end line: 2294 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4891 unit: int PyMOL_FreeResultString() file: layer5/PyMOL.cpp start line: 2917 end line: 2921 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4892 unit: void PyMOL_Drag() file: layer5/PyMOL.cpp start line: 3007 end line: 3011 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4893 unit: void PyMOL_PushValidContext() file: layer5/PyMOL.cpp start line: 3057 end line: 3061 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 4894 unit: void PyMOL_PopValidContext() file: layer5/PyMOL.cpp start line: 3063 end line: 3067 size: 5 LOC McCabe index: 4 number of parameters: 1 id: 4895 unit: void PyMOL_InitializeCMol() file: layer5/PyMOL.cpp start line: 3086 end line: 3094 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4896 unit: void MainBlock() file: layer5/main.cpp start line: 66 end line: 70 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4897 unit: void MainUnblock() file: layer5/main.cpp start line: 72 end line: 76 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4898 unit: int MainLockAPIAsGlut() file: layer5/main.cpp start line: 78 end line: 82 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4899 unit: void MainUnlockAPIAsGlut() file: layer5/main.cpp start line: 84 end line: 88 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 4900 unit: int MainFeedbackOut() file: layer5/main.cpp start line: 90 end line: 94 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4901 unit: void MainSetWindowVisibility() file: layer5/main.cpp start line: 404 end line: 409 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4902 unit: void MainSetWindowSize() file: layer5/main.cpp start line: 1359 end line: 1363 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4903 unit: static void PopUpForgetChild() file: layer4/PopUp.cpp start line: 348 end line: 353 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4904 unit: void MovieScenesFromPyList() file: layer3/MovieScene.cpp start line: 829 end line: 836 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4905 unit: void EditorMouseInvalid() file: layer3/Editor.cpp start line: 150 end line: 154 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4906 unit: int EditorIsBondMode() file: layer3/Editor.cpp start line: 388 end line: 392 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4907 unit: int EditorActive() file: layer3/Editor.cpp start line: 451 end line: 455 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4908 unit: void writeEND() file: layer3/MoleculeExporter.cpp start line: 458 end line: 462 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 4909 unit: void init() file: layer3/MoleculeExporter.cpp start line: 560 end line: 565 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4910 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 912 end line: 917 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 4911 unit: void beginFile() file: layer3/MoleculeExporter.cpp start line: 1063 end line: 1067 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 4912 unit: def doSave() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4913 unit: def closeEvent() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4914 unit: def open_props_dialog() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4915 unit: def doPrompt() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4916 unit: def createlegacypmgapp() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4917 unit: def asksaveasfilename() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4918 unit: def asksaveasfile() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4919 unit: def find_spec() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 4920 unit: def resizeGL() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4921 unit: def paintZoomArea() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 3 id: 4922 unit: def alphaToY() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4923 unit: def reset() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4924 unit: def windowTopLevelChanged() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4925 unit: def actionWizardDone() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4926 unit: def get_panel() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4927 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4928 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4929 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4930 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4931 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4932 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4933 unit: def do_pick() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 4934 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4935 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4936 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4937 unit: def getSeleDict() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4938 unit: def showEvent() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4939 unit: def center() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4940 unit: def sculpt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4941 unit: def _BaseWidget_setup() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 3 id: 4942 unit: def setting() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4943 unit: def __init__() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4944 unit: def findnewline() file: modules/pmg_qt/syntax/pmlparser.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4945 unit: void Array1D::set_() file: modules/cealign/src/tnt/tnt_array1d.h start line: 280 end line: 285 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4946 unit: void Fortran_Array2D::set_() file: modules/cealign/src/tnt/tnt_fortran_array2d.h start line: 204 end line: 209 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4947 unit: void insert() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 129 end line: 134 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4948 unit: void i_refvec::copy_() file: modules/cealign/src/tnt/tnt_i_refvec.h start line: 81 end line: 85 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4949 unit: inline static double seconds() file: modules/cealign/src/tnt/tnt_stopwatch.h start line: 30 end line: 34 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4950 unit: void Fortran_Array1D::set_() file: modules/cealign/src/tnt/tnt_fortran_array1d.h start line: 246 end line: 251 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4951 unit: def doSave() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4952 unit: def accept() file: modules/pmg_tk/skins/normal/ModalWindow.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 4953 unit: def pack_and_display() file: modules/pmg_tk/skins/normal/ModalWindow.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4954 unit: def _inc_fontsize() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 4955 unit: def my_withdraw() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4956 unit: def my_deactivate() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 4957 unit: def actionWizardDone() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4958 unit: def get_panel() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4959 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4960 unit: def do_pick() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4961 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4962 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4963 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4964 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4965 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4966 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4967 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4968 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4969 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4970 unit: def center() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4971 unit: def sculpt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4972 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4973 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4974 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4975 unit: def getSeleDict() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4976 unit: def quit() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 4977 unit: def update_canvas() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4978 unit: def cancel() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4979 unit: def alpha() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4980 unit: def _update() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4981 unit: def increment() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 4982 unit: def alphaToCanvas() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4983 unit: def canvasToAlpha() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4984 unit: def _transCoords() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 4 id: 4985 unit: def my_withdraw() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4986 unit: def __init__() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4987 unit: def getPqrFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4988 unit: def getUnassignedAtomsFromPqr() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 4989 unit: def dirvalidate() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4990 unit: def singleselectfile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4991 unit: def filevalidate() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 4992 unit: def updatePosSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4993 unit: def updateNegSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 4994 unit: def MakeBond() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 4995 unit: def make_see_also_link() file: modules/pymol/cmd.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4996 unit: def mpng() file: modules/pymol/moving.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 10 id: 4997 unit: def back() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4998 unit: def forward() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 4999 unit: def _jump_history() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5000 unit: def spawn_file() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5001 unit: def _base() file: modules/pymol/editing.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 3 id: 5002 unit: def ep_mouse_up() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 5003 unit: def OnSize() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5004 unit: def OnMouseUp() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5005 unit: def OnMouseWheel() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5006 unit: def OnAbout() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5007 unit: def _guess_trajectory_object() file: modules/pymol/importing.py start line: 0 end line: 0 size: 5 LOC McCabe index: 4 number of parameters: 2 id: 5008 unit: def get_tk_root() file: modules/pymol/plugins/legacysupport.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 5009 unit: def is_verbose() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 4 number of parameters: 1 id: 5010 unit: def add_repository() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 5011 unit: def startup_all() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 5012 unit: def startup_none() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 5013 unit: def retrieve() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5014 unit: def copy() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5015 unit: def cnc() file: modules/pymol/util.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5016 unit: def _reverse_lookup() file: modules/pymol/constants.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 5017 unit: def safe_alpha_list_eval() file: modules/pymol/constants.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5018 unit: def get_panel() file: modules/pymol/wizard/annotation.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5019 unit: def toggle_points() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5020 unit: def edit_name() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5021 unit: def set_menu_values() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 5 id: 5022 unit: def run() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5023 unit: def get_prompt() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5024 unit: def ray_trace0() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5025 unit: def set_mode() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5026 unit: def set_object_mode() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5027 unit: def cleanup() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5028 unit: def clear_input() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5029 unit: def get_menu() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5030 unit: def do_pick() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 5031 unit: def set_object_mode() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5032 unit: def do_select() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5033 unit: def load_library() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 5034 unit: def do_select() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5035 unit: def _update_reps() file: modules/pymol/wizard/nucmutagenesis.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5036 unit: def set_object() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5037 unit: def set_object_mode() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5038 unit: def get_panel() file: modules/pymol/wizard/renaming.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5039 unit: def get_panel() file: modules/pymol/wizard/fedora.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5040 unit: def set_scope() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5041 unit: def set_what() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5042 unit: def set_color() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5043 unit: def set_mode() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5044 unit: def decorator() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5045 unit: def find_spec() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 4 id: 5046 unit: def get_setting_tuple() file: modules/pymol/setting.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 5047 unit: def load_coords() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5048 unit: def _raising() file: modules/pymol/checking.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 5049 unit: def _append_async0() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5050 unit: def get_psestr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 5051 unit: def _get_mtl_obj() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5052 unit: def mol_as() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5053 unit: def mol_toggle() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5054 unit: def hide_hydro() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5055 unit: def map_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5056 unit: def map_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5057 unit: def mesh_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5058 unit: def mesh_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5059 unit: def surface_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5060 unit: def surface_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5061 unit: def volume_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5062 unit: def volume_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5063 unit: def movement() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5064 unit: def masking() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5065 unit: def iso_with_negative() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 5 id: 5066 unit: def map_gradient() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5067 unit: def main_pseudoatom() file: modules/pymol/menu.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5068 unit: def rpcLabel() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 6 id: 5069 unit: def rpcRotate() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5070 unit: def expose() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5071 unit: def ramp_new() file: modules/pymol/creating.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 18 id: 5072 unit: def wizard_sc() file: modules/pymol/completing.py start line: 0 end line: 0 size: 5 LOC McCabe index: 4 number of parameters: 0 id: 5073 unit: def is_glut_thread() file: modules/pymol/locking.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 5074 unit: def show_help() file: modules/pymol/helping.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5075 unit: def get_movie_fps() file: modules/pymol/movie.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5076 unit: def align() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 16 id: 5077 unit: def sg_register_if_unknown() file: modules/pymol/xray.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 2 id: 5078 unit: def _scene_get_current_message() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 5 LOC McCabe index: 4 number of parameters: 1 id: 5079 unit: def angle() file: modules/pymol/querying.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5080 unit: def distance() file: modules/pymol/querying.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5081 unit: def __init__() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 5 LOC McCabe index: 4 number of parameters: 2 id: 5082 unit: def stop() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5083 unit: def get_list() file: modules/chempy/tinker/amber.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5084 unit: def load_model() file: modules/chempy/tinker/state.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5085 unit: def pmin() file: modules/chempy/bmin/commands.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 5086 unit: def updateFromList() file: modules/chempy/xyz.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 5087 unit: def get_coord_list() file: modules/chempy/models.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5088 unit: def get_mass() file: modules/chempy/models.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5089 unit: def list() file: modules/chempy/models.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 5090 unit: def reset() file: modules/chempy/models.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5091 unit: def add_bond() file: modules/chempy/models.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5092 unit: def remove_bond() file: modules/chempy/models.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5093 unit: def reset() file: modules/chempy/models.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5094 unit: def __getattr__() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5095 unit: def readline() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5096 unit: def fromFile() file: modules/chempy/lst.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5097 unit: def get() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5098 unit: def write() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5099 unit: def distance_sq() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5100 unit: def distance() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5101 unit: def scale_system() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5102 unit: def fromFile() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5103 unit: def fromStream() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 3 id: 5104 unit: def toStream() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 5105 unit: def __init__() file: modules/chempy/cif.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5106 unit: def _get() file: modules/chempy/cif.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 5107 unit: def read_chem_comp_atom() file: modules/chempy/cif.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 1 id: 5108 unit: def __init__() file: modules/chempy/cif.py start line: 0 end line: 0 size: 5 LOC McCabe index: 3 number of parameters: 3 id: 5109 unit: def get_zmat_ordering() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5110 unit: def get_eldens_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5111 unit: def get_elpot_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 5112 unit: def get_scf() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5113 unit: def get_optimize_charge_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5114 unit: def get_energy_charge_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5115 unit: def get_density_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 5116 unit: def get_potential_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 5117 unit: def get_prop_charge_job() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 5118 unit: def get_table_iter() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 5 LOC McCabe index: 4 number of parameters: 3 id: 5119 unit: def sym2num() file: modules/chempy/cex.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5120 unit: def num2sym() file: modules/chempy/cex.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5121 unit: def __str__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 5122 unit: def __getitem__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5123 unit: def __delitem__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5124 unit: def update_setting() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 5125 unit: void ExtrudeTruncate() file: layer1/Extrude.cpp start line: 2213 end line: 2218 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5126 unit: void TextAdvance() file: layer1/Text.cpp start line: 118 end line: 121 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5127 unit: void TextSetTargetPos() file: layer1/Text.cpp start line: 206 end line: 209 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5128 unit: void TextSetIndentFactorX() file: layer1/Text.cpp start line: 337 end line: 340 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5129 unit: void TextSetIndentFactorY() file: layer1/Text.cpp start line: 342 end line: 345 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5130 unit: void PLockStatus() file: layer1/P.cpp start line: 949 end line: 952 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5131 unit: void PUnlockStatus() file: layer1/P.cpp start line: 968 end line: 971 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5132 unit: static void PLockGLUT() file: layer1/P.cpp start line: 973 end line: 976 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5133 unit: static void PUnlockGLUT() file: layer1/P.cpp start line: 978 end line: 981 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5134 unit: void PXDecRef() file: layer1/P.cpp start line: 1113 end line: 1116 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5135 unit: void my_interrupt() file: layer1/P.cpp start line: 1290 end line: 1293 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5136 unit: void PDumpTraceback() file: layer1/P.cpp start line: 1295 end line: 1298 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5137 unit: void PDumpException() file: layer1/P.cpp start line: 1300 end line: 1303 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5138 unit: void PRunStringModule() file: layer1/P.cpp start line: 2091 end line: 2094 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5139 unit: void PRunStringInstance() file: layer1/P.cpp start line: 2096 end line: 2099 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5140 unit: void PParse() file: layer1/P.cpp start line: 2385 end line: 2388 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5141 unit: void PBlockLegacy() file: layer1/P.cpp start line: 2569 end line: 2572 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5142 unit: void PUnblockLegacy() file: layer1/P.cpp start line: 2574 end line: 2577 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5143 unit: int PIsGlutThread() file: layer1/P.cpp start line: 2659 end line: 2662 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5144 unit: static void PUnlockAPIWhileBlocked() file: layer1/P.cpp start line: 2738 end line: 2741 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5145 unit: static void PLockAPIWhileBlocked() file: layer1/P.cpp start line: 2743 end line: 2746 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5146 unit: static void glReadBufferError() file: layer1/Scene.cpp start line: 67 end line: 70 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5147 unit: int StereoIsAdjacent() file: layer1/Scene.cpp start line: 329 end line: 332 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5148 unit: static void ScenePurgeImage() file: layer1/Scene.cpp start line: 407 end line: 410 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5149 unit: void SceneClipSet() file: layer1/Scene.cpp start line: 1233 end line: 1236 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5150 unit: int SceneGetState() file: layer1/Scene.cpp start line: 1346 end line: 1349 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5151 unit: int CScene::click() file: layer1/Scene.cpp start line: 5751 end line: 5754 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5152 unit: void SceneDone() file: layer1/Scene.cpp start line: 5993 end line: 5996 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5153 unit: void SceneRotate() file: layer1/Scene.cpp start line: 6980 end line: 6983 size: 4 LOC McCabe index: 1 number of parameters: 5 id: 5154 unit: void SceneSetBackgroundColorAlreadySet() file: layer1/Scene.cpp start line: 7108 end line: 7111 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5155 unit: int SceneGetBackgroundColorAlreadySet() file: layer1/Scene.cpp start line: 7112 end line: 7115 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5156 unit: void SceneSetDoNotClearBackground() file: layer1/Scene.cpp start line: 7116 end line: 7119 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5157 unit: int SceneGetDoNotClearBackground() file: layer1/Scene.cpp start line: 7121 end line: 7124 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5158 unit: int SceneIsTwisting() file: layer1/Scene.cpp start line: 7172 end line: 7175 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5159 unit: int SceneIncrementTextureRefreshes() file: layer1/Scene.cpp start line: 7183 end line: 7186 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5160 unit: void SceneResetTextureRefreshes() file: layer1/Scene.cpp start line: 7188 end line: 7191 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5161 unit: float SceneGetCurrentBackSafe() file: layer1/Scene.cpp start line: 7299 end line: 7302 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5162 unit: float SceneGetCurrentFrontSafe() file: layer1/Scene.cpp start line: 7303 end line: 7306 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5163 unit: void SceneInvalidatePicking() file: layer1/Scene.cpp start line: 7317 end line: 7320 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5164 unit: bool SettingLevelCheckMask() file: layer1/Setting.cpp start line: 81 end line: 84 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5165 unit: void SettingStoreDefault() file: layer1/Setting.cpp start line: 124 end line: 127 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5166 unit: int SettingUniqueCheck() file: layer1/Setting.cpp start line: 196 end line: 199 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5167 unit: int SettingGetType() file: layer1/Setting.cpp start line: 1584 end line: 1587 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5168 unit: void RepPurge() file: layer1/Rep.cpp start line: 189 end line: 192 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5169 unit: int RayGetNPrimitives() file: layer1/Ray.cpp start line: 215 end line: 218 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5170 unit: void RayGetScreenVertex() file: layer1/Ray.cpp start line: 7793 end line: 7796 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5171 unit: CViewIterator ViewGetIterator() file: layer1/View.cpp start line: 575 end line: 578 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5172 unit: void update() file: layer1/PyMOLObject.h start line: 96 end line: 99 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 5173 unit: void render() file: layer1/PyMOLObject.h start line: 101 end line: 104 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5174 unit: void invalidate() file: layer1/PyMOLObject.h start line: 106 end line: 109 size: 4 LOC McCabe index: 2 number of parameters: 3 id: 5175 unit: int ColorCheckRamped() file: layer1/Color.cpp start line: 171 end line: 174 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5176 unit: void ButModeFree() file: layer1/ButMode.cpp start line: 142 end line: 145 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5177 unit: inline bool PConvFromPyObject() file: layer1/PConv.h start line: 280 end line: 283 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5178 unit: inline bool PConvFromPyObject() file: layer1/PConv.h start line: 285 end line: 288 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5179 unit: inline bool PConvFromPyObject() file: layer1/PConv.h start line: 290 end line: 293 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5180 unit: inline bool PConvFromPyObject() file: layer1/PConv.h start line: 295 end line: 298 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5181 unit: void ControlFree() file: layer1/Control.cpp start line: 418 end line: 422 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5182 unit: int OrthoBackgroundDataIsSet() file: layer1/Ortho.cpp start line: 122 end line: 126 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5183 unit: GLuint OrthoGetBackgroundTextureID() file: layer1/Ortho.cpp start line: 1281 end line: 1284 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5184 unit: void OrthoBackgroundTextureNeedsUpdate() file: layer1/Ortho.cpp start line: 1298 end line: 1301 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5185 unit: int OrthoGetWrapClickSide() file: layer1/Ortho.cpp start line: 2334 end line: 2337 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5186 unit: int OrthoGetPushed() file: layer1/Ortho.cpp start line: 2708 end line: 2711 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5187 unit: void OrthoCommandSetBusy() file: layer1/Ortho.cpp start line: 2722 end line: 2725 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5188 unit: int TypeFaceCharacterNew() file: layer1/TypeFace.cpp start line: 152 end line: 155 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5189 unit: int TypeInit() file: layer1/TypeFace.cpp start line: 172 end line: 175 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5190 unit: inline void _PConvArgsToPyList_SetItem() file: layer1/PConvArgs.h start line: 26 end line: 29 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5191 unit: inline bool PConvArgsFromPyList() file: layer1/PConvArgs.h start line: 114 end line: 117 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5192 unit: static void ColladaEndGeometryMesh() file: layer1/COLLADA.cpp start line: 331 end line: 334 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5193 unit: static void ColladaEndPolylistElement() file: layer1/COLLADA.cpp start line: 588 end line: 591 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5194 unit: static void ColladaEndTristripsElement() file: layer1/COLLADA.cpp start line: 612 end line: 615 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5195 unit: static void ColladaEndTrifansElement() file: layer1/COLLADA.cpp start line: 636 end line: 639 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5196 unit: void FontGLUTFree() file: layer1/FontGLUT.cpp start line: 431 end line: 434 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5197 unit: static void ObjectDescribeElement() file: layer1/PyMOLObject.cpp start line: 1108 end line: 1111 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5198 unit: int ObjectGetNFrames() file: layer1/PyMOLObject.cpp start line: 1184 end line: 1187 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5199 unit: void setChanged() file: layer1/Setting.h start line: 64 end line: 67 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5200 unit: void set_i() file: layer1/Setting.h start line: 70 end line: 73 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5201 unit: void set_f() file: layer1/Setting.h start line: 75 end line: 78 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5202 unit: template void SettingSet() file: layer1/Setting.h start line: 330 end line: 333 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5203 unit: template bool SettingSet() file: layer1/Setting.h start line: 336 end line: 339 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5204 unit: bool SettingUniqueGetIfDefined() file: layer1/Setting.h start line: 417 end line: 420 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5205 unit: int MovieXtoFrame() file: layer1/Movie.cpp start line: 125 end line: 128 size: 4 LOC McCabe index: 1 number of parameters: 5 id: 5206 unit: void MovieSetSize() file: layer1/Movie.cpp start line: 684 end line: 687 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5207 unit: void PrepareViewPortForMonoInitializeViewPort() file: layer1/SceneRender.cpp start line: 1176 end line: 1179 size: 4 LOC McCabe index: 1 number of parameters: 9 id: 5208 unit: explicit vla() file: layer0/vla.h start line: 60 end line: 63 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5209 unit: std::vector toStdVector() file: layer0/vla.h start line: 139 end line: 142 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5210 unit: template pymol::vla VLACopy2() file: layer0/vla.h start line: 151 end line: 154 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5211 unit: template void VLACheck2() file: layer0/vla.h start line: 156 end line: 159 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5212 unit: template void VLASize2() file: layer0/vla.h start line: 161 end line: 164 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5213 unit: template void VLAFreeP() file: layer0/vla.h start line: 166 end line: 169 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5214 unit: void UtilFree() file: layer0/Util.cpp start line: 37 end line: 40 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5215 unit: int UtilSemiSortFloatIndex() file: layer0/Util.cpp start line: 401 end line: 404 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5216 unit: int TrackerGetNList() file: layer0/Tracker.cpp start line: 542 end line: 545 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5217 unit: int TrackerGetNCand() file: layer0/Tracker.cpp start line: 547 end line: 550 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5218 unit: int TrackerGetNLink() file: layer0/Tracker.cpp start line: 552 end line: 555 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5219 unit: int TrackerGetNIter() file: layer0/Tracker.cpp start line: 557 end line: 560 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5220 unit: void WordFree() file: layer0/Word.cpp start line: 681 end line: 684 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5221 unit: void FeedbackAdd() file: layer0/Feedback.cpp start line: 150 end line: 153 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5222 unit: void FeedbackAddColored() file: layer0/Feedback.cpp start line: 155 end line: 158 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5223 unit: void CrystalFree() file: layer0/Crystal.cpp start line: 68 end line: 71 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5224 unit: static void _TetsurfFree() file: layer0/Tetsurf.cpp start line: 397 end line: 400 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5225 unit: GLuint TextureGetTextTextureID() file: layer0/Texture.cpp start line: 53 end line: 56 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5226 unit: int TextureGetTextTextureSize() file: layer0/Texture.cpp start line: 57 end line: 60 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5227 unit: int p_glutGet() file: layer0/os_gl.cpp start line: 108 end line: 111 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5228 unit: int p_glutGet() file: layer0/os_gl.cpp start line: 232 end line: 235 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5229 unit: int p_glutGetModifiers() file: layer0/os_gl.cpp start line: 237 end line: 240 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5230 unit: void p_glutIdleFunc() file: layer0/os_gl.cpp start line: 270 end line: 273 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5231 unit: int p_glutCreateWindow() file: layer0/os_gl.cpp start line: 363 end line: 366 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5232 unit: void p_glutPostRedisplay() file: layer0/os_gl.cpp start line: 414 end line: 417 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5233 unit: int p_glutGet() file: layer0/os_gl.cpp start line: 441 end line: 444 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5234 unit: int p_glutGetModifiers() file: layer0/os_gl.cpp start line: 446 end line: 449 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5235 unit: void p_glutDisplayFunc() file: layer0/os_gl.cpp start line: 451 end line: 454 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5236 unit: void p_glutReshapeFunc() file: layer0/os_gl.cpp start line: 456 end line: 459 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5237 unit: void p_glutKeyboardFunc() file: layer0/os_gl.cpp start line: 461 end line: 464 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5238 unit: void p_glutMouseFunc() file: layer0/os_gl.cpp start line: 466 end line: 469 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5239 unit: void p_glutMotionFunc() file: layer0/os_gl.cpp start line: 471 end line: 474 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5240 unit: void p_glutPassiveMotionFunc() file: layer0/os_gl.cpp start line: 476 end line: 479 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5241 unit: void p_glutSpecialFunc() file: layer0/os_gl.cpp start line: 481 end line: 484 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5242 unit: void p_glutIdleFunc() file: layer0/os_gl.cpp start line: 486 end line: 489 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5243 unit: static void glShaderSource1String() file: layer0/ShaderMgr.cpp start line: 94 end line: 97 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5244 unit: void CShaderMgr::SetShaderSource() file: layer0/ShaderMgr.cpp start line: 1722 end line: 1725 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5245 unit: void CShaderMgr::freeGPUBuffers() file: layer0/ShaderMgr.cpp start line: 1753 end line: 1756 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5246 unit: unsigned int optimizer_workaround1u() file: layer0/Vector.cpp start line: 88 end line: 91 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5247 unit: float get_random0to1f() file: layer0/Vector.cpp start line: 93 end line: 96 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5248 unit: void dump3i() file: layer0/Vector.cpp start line: 106 end line: 109 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5249 unit: void dump3f() file: layer0/Vector.cpp start line: 111 end line: 114 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5250 unit: void dump2f() file: layer0/Vector.cpp start line: 116 end line: 119 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5251 unit: void dump3d() file: layer0/Vector.cpp start line: 121 end line: 124 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5252 unit: void dump4f() file: layer0/Vector.cpp start line: 126 end line: 129 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5253 unit: double dot_product3d() file: layer0/Vector.cpp start line: 297 end line: 300 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5254 unit: void convertR44dTTTf() file: layer0/Vector.cpp start line: 976 end line: 981 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5255 unit: void matrix_multiply33f33f() file: layer0/Vector.cpp start line: 1520 end line: 1523 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5256 unit: void matrix_multiply33d33d() file: layer0/Vector.cpp start line: 1525 end line: 1528 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5257 unit: float deg_to_rad() file: layer0/Vector.cpp start line: 1530 end line: 1533 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5258 unit: float rad_to_deg() file: layer0/Vector.cpp start line: 1535 end line: 1538 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5259 unit: void rotation_to_matrix33f() file: layer0/Vector.cpp start line: 1562 end line: 1565 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5260 unit: double length3d() file: layer0/Vector.cpp start line: 1737 end line: 1740 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5261 unit: void rotation_to_matrix() file: layer0/Vector.cpp start line: 1920 end line: 1923 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5262 unit: float MapGetDiv() file: layer0/Map.cpp start line: 33 end line: 36 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5263 unit: bool bufferData() file: layer0/GenericBuffer.h start line: 246 end line: 249 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5264 unit: void bufferReplaceData() file: layer0/GenericBuffer.h start line: 285 end line: 288 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5265 unit: void bind() file: layer0/GenericBuffer.h start line: 468 end line: 472 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 5266 unit: inline void LexAssign() file: layer0/Lex.h start line: 43 end line: 46 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5267 unit: inline lexidx_t LexBorrow() file: layer0/Lex.h start line: 54 end line: 57 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5268 unit: static void _IsosurfFree() file: layer0/Isosurf.cpp start line: 100 end line: 103 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5269 unit: void copyN() file: layer0/Vector.h start line: 342 end line: 345 size: 4 LOC McCabe index: 2 number of parameters: 3 id: 5270 unit: void copy2() file: layer0/Vector.h start line: 348 end line: 351 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5271 unit: inline unsigned int VLAGetByteSize() file: layer0/MemoryDebug.h start line: 93 end line: 96 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5272 unit: ov_uword OVLexicon_GetNActive() file: ov/src/OVLexicon.cpp start line: 29 end line: 32 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5273 unit: void ov_utility_zero_bytes() file: ov/src/ov_utility.cpp start line: 56 end line: 59 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5274 unit: static int OutputInOrder() file: ov/src/OVHeap.cpp start line: 98 end line: 101 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5275 unit: void OVRandom_Del() file: ov/src/OVRandom.cpp start line: 69 end line: 72 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5276 unit: ov_int32 OVRandom_Get_int31() file: ov/src/OVRandom.cpp start line: 198 end line: 201 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5277 unit: ov_float64 OVRandom_Get_float64_inc1() file: ov/src/OVRandom.cpp start line: 205 end line: 209 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5278 unit: ov_float64 OVRandom_Get_float64_exc1() file: ov/src/OVRandom.cpp start line: 213 end line: 217 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5279 unit: ov_float64 OVRandom_Get_float64_exc01() file: ov/src/OVRandom.cpp start line: 221 end line: 225 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5280 unit: void StrBlockFree() file: contrib/champ/strblock.c start line: 90 end line: 93 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5281 unit: int ListElemNew() file: contrib/champ/list.c start line: 185 end line: 188 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5282 unit: void ListFree() file: contrib/champ/list.c start line: 286 end line: 289 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5283 unit: static float dot_product3f() file: contrib/champ/champ.c start line: 4324 end line: 4327 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5284 unit: void init_champ() file: contrib/champ/champ_module.c start line: 1072 end line: 1075 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5285 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp start line: 327 end line: 330 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5286 unit: static void write_cryst1() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 493 end line: 496 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5287 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 601 end line: 604 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5288 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 412 end line: 415 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5289 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4883 end line: 4886 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5290 unit: static fio_size_t fio_fread() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 292 end line: 295 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5291 unit: static fio_size_t fio_fwrite() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 311 end line: 314 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5292 unit: static int fio_write_str() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 609 end line: 612 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5293 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 378 end line: 381 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5294 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp start line: 259 end line: 262 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5295 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 415 end line: 418 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5296 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp start line: 330 end line: 333 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5297 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c start line: 248 end line: 251 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5298 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp start line: 313 end line: 316 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5299 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp start line: 172 end line: 175 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5300 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp start line: 194 end line: 197 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5301 unit: static int is_little_endian() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 240 end line: 243 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5302 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 517 end line: 520 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5303 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 443 end line: 446 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5304 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c start line: 339 end line: 342 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5305 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp start line: 146 end line: 149 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5306 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 1111 end line: 1114 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5307 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 703 end line: 706 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5308 unit: static void mirror() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 660 end line: 663 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5309 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1981 end line: 1984 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5310 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c start line: 319 end line: 322 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5311 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c start line: 184 end line: 187 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5312 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp start line: 233 end line: 236 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5313 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp start line: 706 end line: 709 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5314 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c start line: 256 end line: 259 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5315 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp start line: 327 end line: 330 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5316 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 485 end line: 488 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5317 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 737 end line: 740 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5318 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c start line: 316 end line: 319 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5319 unit: void close_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2602 end line: 2605 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5320 unit: void free_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 2615 end line: 2619 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5321 unit: void set_prop_rules_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 3213 end line: 3216 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5322 unit: static void close() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1281 end line: 1284 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5323 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1463 end line: 1466 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5324 unit: static void close_dcd_read() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 837 end line: 840 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5325 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1173 end line: 1176 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5326 unit: uint64_t assemble64() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 145 end line: 148 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5327 unit: uint32_t lobytes() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 218 end line: 221 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5328 unit: bool isfile() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 305 end line: 308 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5329 unit: int DtrReader::ndir1() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1687 end line: 1690 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 5330 unit: int DtrReader::ndir2() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1692 end line: 1695 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 5331 unit: static int read_next_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2228 end line: 2231 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5332 unit: static int read_timestep2() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2234 end line: 2237 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5333 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2248 end line: 2251 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5334 unit: static int write_timestep() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2262 end line: 2265 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5335 unit: static void close_file_write() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2267 end line: 2270 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5336 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2304 end line: 2307 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5337 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 664 end line: 667 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5338 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 606 end line: 609 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5339 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp start line: 518 end line: 521 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5340 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 414 end line: 417 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5341 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1440 end line: 1444 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5342 unit: static int mdio_seterror() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 413 end line: 416 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5343 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 285 end line: 288 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5344 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp start line: 335 end line: 338 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5345 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp start line: 314 end line: 317 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5346 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c start line: 277 end line: 280 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5347 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp start line: 186 end line: 189 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5348 unit: explicit DtrWriter() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 301 end line: 304 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5349 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c start line: 305 end line: 308 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5350 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp start line: 251 end line: 254 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5351 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp start line: 580 end line: 583 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5352 unit: static void eatline() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 42 end line: 45 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5353 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 504 end line: 507 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5354 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp start line: 301 end line: 304 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5355 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp start line: 315 end line: 318 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5356 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp start line: 260 end line: 263 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5357 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 254 end line: 257 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5358 unit: static void eatline() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 236 end line: 239 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5359 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 929 end line: 932 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5360 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c start line: 287 end line: 290 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5361 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 389 end line: 392 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5362 unit: void ReadPARM::get_hydrogen_bond() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 934 end line: 937 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5363 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1329 end line: 1332 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5364 unit: int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 600 end line: 603 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5365 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp start line: 224 end line: 227 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5366 unit: static void write_pqr_cryst1() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 386 end line: 389 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5367 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 452 end line: 455 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5368 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp start line: 270 end line: 273 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5369 unit: void write_ct_ffio_header() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1471 end line: 1474 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5370 unit: void write_ct_footer() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1539 end line: 1542 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5371 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 2046 end line: 2049 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5372 unit: VMDPLUGIN_API int VMDPLUGIN_register() file: contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp start line: 345 end line: 348 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5373 unit: void MMTF_Transform_destroy() file: contrib/mmtf-c/mmtf_parser.cpp start line: 317 end line: 320 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5374 unit: def forms_uic() file: setup.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5375 unit: def unchroot() file: setup.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5376 unit: def install_pymol_path() file: setup.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5377 unit: void AtomInfoAssignColors() file: layer2/AtomInfo.cpp start line: 1892 end line: 1895 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5378 unit: int AtomInfoCompare() file: layer2/AtomInfo.cpp start line: 2067 end line: 2070 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5379 unit: int AtomInfoCompareIgnoreRankHet() file: layer2/AtomInfo.cpp start line: 2072 end line: 2075 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5380 unit: int AtomInfoCompareIgnoreRank() file: layer2/AtomInfo.cpp start line: 2077 end line: 2080 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5381 unit: int AtomInfoCompareIgnoreHet() file: layer2/AtomInfo.cpp start line: 2082 end line: 2085 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5382 unit: void atomicnumber2elem() file: layer2/AtomInfo.cpp start line: 2806 end line: 2809 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5383 unit: void setResi() file: layer2/AtomInfo.h start line: 316 end line: 319 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5384 unit: void setResi() file: layer2/AtomInfo.h start line: 322 end line: 325 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5385 unit: bool AtomSettingGetIfDefined() file: layer2/AtomInfo.h start line: 484 end line: 487 size: 4 LOC McCabe index: 2 number of parameters: 4 id: 5386 unit: static void ObjectCallbackUpdate() file: layer2/ObjectCallback.cpp start line: 60 end line: 63 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5387 unit: static int ObjectCallbackGetNStates() file: layer2/ObjectCallback.cpp start line: 119 end line: 122 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5388 unit: bool is_excluded_chain() file: layer2/CifMoleculeReader.cpp start line: 124 end line: 127 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5389 unit: static void ObjectMeshRender() file: layer2/ObjectMesh.cpp start line: 775 end line: 778 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5390 unit: static int ObjectMeshGetNStates() file: layer2/ObjectMesh.cpp start line: 1147 end line: 1150 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5391 unit: static void ObjectGadgetRampInvalidate() file: layer2/ObjectGadgetRamp.cpp start line: 1045 end line: 1048 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5392 unit: static int ObjectVolumeGetNStates() file: layer2/ObjectVolume.cpp start line: 1111 end line: 1114 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5393 unit: int BondInOrder() file: layer2/CoordSet.cpp start line: 122 end line: 125 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5394 unit: void RefPosTypeCopy() file: layer2/CoordSet.cpp start line: 1723 end line: 1726 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5395 unit: static int ObjectAlignmentGetNState() file: layer2/ObjectAlignment.cpp start line: 1080 end line: 1083 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5396 unit: void ObjectGroupResetMatrix() file: layer2/ObjectGroup.cpp start line: 105 end line: 108 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5397 unit: void ObjectGroupTransformMatrix() file: layer2/ObjectGroup.cpp start line: 122 end line: 125 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5398 unit: static int ObjectGadgetGetNState() file: layer2/ObjectGadget.cpp start line: 446 end line: 449 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5399 unit: static int ObjectSurfaceGetNStates() file: layer2/ObjectSurface.cpp start line: 1056 end line: 1059 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5400 unit: inline void setResi() file: layer2/AtomInfoHistory.h start line: 93 end line: 96 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5401 unit: inline void setResi() file: layer2/AtomInfoHistory.h start line: 169 end line: 172 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5402 unit: void setResi() file: layer2/AtomInfoHistory.h start line: 241 end line: 244 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5403 unit: void setResi() file: layer2/AtomInfoHistory.h start line: 246 end line: 249 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5404 unit: static int ObjectCGOGetNState() file: layer2/ObjectCGO.cpp start line: 253 end line: 256 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5405 unit: int ObjectDistGetNFrames() file: layer2/ObjectDist.cpp start line: 407 end line: 410 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5406 unit: int cif_array::as_i() file: layer2/CifFile.cpp start line: 134 end line: 137 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5407 unit: double cif_array::as_d() file: layer2/CifFile.cpp start line: 140 end line: 143 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5408 unit: void set_loop() file: layer2/CifFile.h start line: 76 end line: 79 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5409 unit: void set_value() file: layer2/CifFile.h start line: 82 end line: 85 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5410 unit: void drawLine2D() file: layer2/RepLabel.cpp start line: 227 end line: 230 size: 4 LOC McCabe index: 1 number of parameters: 5 id: 5411 unit: void drawLineToPointInWorld() file: layer2/RepLabel.cpp start line: 390 end line: 393 size: 4 LOC McCabe index: 1 number of parameters: 8 id: 5412 unit: void drawLine2DCheckZTarget() file: layer2/RepLabel.cpp start line: 403 end line: 406 size: 4 LOC McCabe index: 1 number of parameters: 9 id: 5413 unit: void drawLine2DCheckZTargetClip() file: layer2/RepLabel.cpp start line: 408 end line: 411 size: 4 LOC McCabe index: 1 number of parameters: 11 id: 5414 unit: static int ObjectSliceGetNStates() file: layer2/ObjectSlice.cpp start line: 1283 end line: 1286 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5415 unit: int ObjectMapGetNStates() file: layer2/ObjectMap.cpp start line: 2161 end line: 2164 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5416 unit: void PyMOLOptions_Free() file: layer5/PyMOL.cpp start line: 1911 end line: 1914 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5417 unit: void PyMOL_NeedFakeDrag() file: layer5/PyMOL.cpp start line: 2643 end line: 2646 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5418 unit: void PyMOL_NeedRedisplay() file: layer5/PyMOL.cpp start line: 2648 end line: 2651 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5419 unit: void PyMOL_NeedSwap() file: layer5/PyMOL.cpp start line: 2653 end line: 2656 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5420 unit: int PyMOL_GetIdleAndReady() file: layer5/PyMOL.cpp start line: 2707 end line: 2710 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5421 unit: int PyMOL_GetReshape() file: layer5/PyMOL.cpp start line: 2712 end line: 2715 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5422 unit: void PyMOL_SetPassive() file: layer5/PyMOL.cpp start line: 2736 end line: 2739 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5423 unit: void PyMOL_SetModalDraw() file: layer5/PyMOL.cpp start line: 2956 end line: 2959 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5424 unit: void PyMOL_SetSwapBuffersFn() file: layer5/PyMOL.cpp start line: 3037 end line: 3040 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5425 unit: void PyMOL_RunTest() file: layer5/PyMOL.cpp start line: 3052 end line: 3055 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5426 unit: int MainSavingUnderWhileIdle() file: layer5/main.cpp start line: 59 end line: 62 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5427 unit: V SettingGet() file: layer3/MaeExportHelpers.cpp start line: 22 end line: 25 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5428 unit: void SeekerFree() file: layer3/Seeker.cpp start line: 2187 end line: 2190 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5429 unit: void MovieScenesInit() file: layer3/MovieScene.cpp start line: 749 end line: 752 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5430 unit: void EditorInvalidateShaderCGO() file: layer3/Editor.cpp start line: 2390 end line: 2393 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5431 unit: void setMulti() file: layer3/MoleculeExporter.cpp start line: 184 end line: 187 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5432 unit: void resetTmpIDs() file: layer3/MoleculeExporter.cpp start line: 193 end line: 196 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5433 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 464 end line: 467 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5434 unit: bool isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 550 end line: 553 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5435 unit: void writeProperties() file: layer3/MoleculeExporter.cpp start line: 907 end line: 910 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5436 unit: void beginFile() file: layer3/MoleculeExporter.cpp start line: 942 end line: 945 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5437 unit: void beginObject() file: layer3/MoleculeExporter.cpp start line: 965 end line: 968 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5438 unit: void init() file: layer3/MoleculeExporter.cpp start line: 1052 end line: 1056 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5439 unit: void beginObject() file: layer3/MoleculeExporter.cpp start line: 1118 end line: 1121 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5440 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 1266 end line: 1270 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5441 unit: void beginCoordSet() file: layer3/MoleculeExporter.cpp start line: 1295 end line: 1298 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5442 unit: void beginCoordSet() file: layer3/MoleculeExporter.cpp start line: 1574 end line: 1577 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5443 unit: int PlugIOManagerInit() file: layer3/PlugIOManager.cpp start line: 33 end line: 36 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5444 unit: int PlugIOManagerFree() file: layer3/PlugIOManager.cpp start line: 38 end line: 41 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5445 unit: int PlugIOManagerRegister() file: layer3/PlugIOManager.cpp start line: 44 end line: 47 size: 4 LOC McCabe index: 1 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file: modules/web/javascript/pymol.js start line: 267 end line: 270 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5453 unit: read_sdfstr: function() file: modules/web/javascript/pymol.js start line: 271 end line: 274 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5454 unit: read_pdbstr: function() file: modules/web/javascript/pymol.js start line: 275 end line: 278 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5455 unit: read_xplorstr: function() file: modules/web/javascript/pymol.js start line: 279 end line: 282 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5456 unit: get_pdbstr: function() file: modules/web/javascript/pymol.js start line: 283 end line: 286 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5457 unit: get_fastastr: function() file: modules/web/javascript/pymol.js start line: 287 end line: 290 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5458 unit: copy: function() file: modules/web/javascript/pymol.js start line: 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5656 unit: def keyPressEvent() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5657 unit: def get_view() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5658 unit: def edit_pymolrc() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5659 unit: def session_save() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5660 unit: def cd_dialog() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5661 unit: def dragLeaveEvent() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5662 unit: def handle_file_open() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5663 unit: def event() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5664 unit: def askdirectory() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5665 unit: def event() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5666 unit: def mouseMoveEvent() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5667 unit: def updatePointColor() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5668 unit: def updateVolumeColors() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5669 unit: def VolumePanelDialog() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5670 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5671 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5672 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5673 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5674 unit: def run_add() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5675 unit: def do_all() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5676 unit: def do_none() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5677 unit: def highlightBlock() file: modules/pmg_qt/syntax/python.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5678 unit: inline int Fortran_Array3D::ref_count() file: modules/cealign/src/tnt/tnt_fortran_array3d.h start line: 208 end line: 211 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5679 unit: inline int Array1D::ref_count() file: modules/cealign/src/tnt/tnt_array1d.h start line: 253 end line: 256 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5680 unit: void insert_base_one() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 146 end line: 149 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5681 unit: inline T dot_product() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 205 end line: 208 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5682 unit: inline T dot_product() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 211 end line: 214 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5683 unit: inline double norm() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 230 end line: 233 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5684 unit: void getV() file: modules/cealign/src/tnt/jama_svd.h start line: 480 end line: 483 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5685 unit: void getSingularValues() file: modules/cealign/src/tnt/jama_svd.h start line: 487 end line: 490 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5686 unit: int i_refvec::is_null() file: modules/cealign/src/tnt/tnt_i_refvec.h start line: 198 end line: 201 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 5687 unit: inline Matrix mult() file: modules/cealign/src/tnt/tnt_matrix.h start line: 676 end line: 679 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5688 unit: inline Matrix mult_eq() file: modules/cealign/src/tnt/tnt_matrix.h start line: 706 end line: 709 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5689 unit: void insert_base_one() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 148 end line: 151 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5690 unit: void close() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 163 end line: 172 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5691 unit: inline double norm() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 265 end line: 268 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5692 unit: int Cholesky::is_spd() file: modules/cealign/src/tnt/jama_cholesky.h start line: 71 end line: 74 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5693 unit: Array2D Cholesky::getL() file: modules/cealign/src/tnt/jama_cholesky.h start line: 80 end line: 83 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5694 unit: int Cholesky::is_spd() file: modules/cealign/src/tnt/tnt_linalg.h start line: 74 end line: 77 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5695 unit: Matrix Cholesky::getL() file: modules/cealign/src/tnt/tnt_linalg.h start line: 83 end line: 86 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5696 unit: void getV() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1163 end line: 1166 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5697 unit: void getRealEigenvalues() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1172 end line: 1175 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5698 unit: void getImagEigenvalues() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1182 end line: 1185 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5699 unit: void getV() file: modules/cealign/src/tnt/tnt_linalg.h start line: 2309 end line: 2312 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5700 unit: void getSingularValues() file: modules/cealign/src/tnt/tnt_linalg.h start line: 2316 end line: 2319 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5701 unit: inline int Fortran_Array1D::ref_count() file: modules/cealign/src/tnt/tnt_fortran_array1d.h start line: 213 end line: 216 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5702 unit: inline Subscript dim() file: modules/cealign/src/tnt/tnt_vector.h start line: 245 end line: 248 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5703 unit: inline Subscript size() file: modules/cealign/src/tnt/tnt_vector.h start line: 250 end line: 253 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5704 unit: inline T dot_product() file: modules/cealign/src/tnt/tnt_vector.h start line: 458 end line: 461 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5705 unit: void getV() file: modules/cealign/src/tnt/jama_eig.h start line: 952 end line: 955 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5706 unit: void getRealEigenvalues() file: modules/cealign/src/tnt/jama_eig.h start line: 961 end line: 964 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5707 unit: void getImagEigenvalues() file: modules/cealign/src/tnt/jama_eig.h start line: 971 end line: 974 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5708 unit: inline int Array2D::ref_count() file: modules/cealign/src/tnt/tnt_array2d.h start line: 425 end line: 428 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5709 unit: inline int Array2D::ref_count_data() file: modules/cealign/src/tnt/tnt_array2d.h start line: 433 end line: 436 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5710 unit: inline int Array2D::ref_count_dim1() file: modules/cealign/src/tnt/tnt_array2d.h start line: 439 end line: 442 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 5711 unit: def _write() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5712 unit: def _set() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5713 unit: def doOpen() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5714 unit: def __init__() file: modules/pmg_tk/skins/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5715 unit: def cancel() file: modules/pmg_tk/skins/normal/ModalWindow.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5716 unit: def darwin_browser_open() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5717 unit: def _doAsync() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 3 id: 5718 unit: def _def_ext() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5719 unit: def cd_dialog() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5720 unit: def get_current_session_file() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5721 unit: def doAsync() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5722 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5723 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 1 id: 5724 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5725 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5726 unit: def run_add() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5727 unit: def do_all() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5728 unit: def do_none() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5729 unit: def nextColumn() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5730 unit: def clear() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5731 unit: def doZoom() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5732 unit: def __init__() file: modules/pmg_tk/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5733 unit: def set() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5734 unit: def move_oval() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5735 unit: def __setstate__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5736 unit: def _set() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5737 unit: def flush_fifo() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5738 unit: def setPqrFile() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5739 unit: def fixColumns() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5740 unit: def dump_str_list() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5741 unit: def execfile() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5742 unit: def valence() file: modules/pymol/editing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 9 id: 5743 unit: def __init__() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5744 unit: def ep_get_redisplay() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5745 unit: def OnIdle() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5746 unit: def InitGL() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5747 unit: def swap() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5748 unit: def OnInit() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5749 unit: def load_traj() file: modules/pymol/importing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 16 id: 5750 unit: def load() file: modules/pymol/importing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 14 id: 5751 unit: def load_embedded() file: modules/pymol/importing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 11 id: 5752 unit: def fetch() file: modules/pymol/importing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 14 id: 5753 unit: def load_r3d() file: modules/pymol/importing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 5 id: 5754 unit: def get_startup_path() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5755 unit: def set_pref_changed() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 5756 unit: def populate_startup_paths() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5757 unit: def w_startup_changed() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5758 unit: def startup_all() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5759 unit: def startup_none() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5760 unit: def show_info() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5761 unit: def plugin_remove() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5762 unit: def get_full_url() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5763 unit: def fetchjson() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5764 unit: def list_scan() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5765 unit: def color_carbon() file: modules/pymol/util.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5766 unit: def process() file: modules/pymol/selector.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5767 unit: def get_event_mask() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5768 unit: def cleanup() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5769 unit: def __init__() file: modules/pymol/wizard/security.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5770 unit: def _validate_instance() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5771 unit: def do_dirty() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5772 unit: def migrate_session() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5773 unit: def __getstate__() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5774 unit: def save_undo() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5775 unit: def cleanup() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5776 unit: def get_panel() file: modules/pymol/wizard/pseudoatom.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5777 unit: def set_level() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5778 unit: def set_radius() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5779 unit: def set_mode() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5780 unit: def set_radius() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5781 unit: def set_cushion() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5782 unit: def do_pick() file: modules/pymol/wizard/fedora.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5783 unit: def get_prompt() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5784 unit: def get_prompt() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5785 unit: def homology() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5786 unit: def __init__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5787 unit: def __call__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5788 unit: def is_error() file: modules/pymol/checking.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5789 unit: def is_ok() file: modules/pymol/checking.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5790 unit: def append_last() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5791 unit: def get_alnstr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5792 unit: def get_ccp4str() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5793 unit: def smooth() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5794 unit: def cgo_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5795 unit: def cgo_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5796 unit: def slice_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5797 unit: def slice_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5798 unit: def by_elem() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5799 unit: def colorramps() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5800 unit: def all_colors() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5801 unit: def mol_assign() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5802 unit: def scene_buttons() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5803 unit: def movie_panel() file: modules/pymol/menu.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5804 unit: def session_save_wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5805 unit: def wfile_write() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5806 unit: def log_message() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 3 id: 5807 unit: def map_new() file: modules/pymol/creating.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5808 unit: def isosurface() file: modules/pymol/creating.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 12 id: 5809 unit: def gradient() file: modules/pymol/creating.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 11 id: 5810 unit: def create() file: modules/pymol/creating.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 11 id: 5811 unit: def pseudoatom() file: modules/pymol/creating.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 19 id: 5812 unit: def block_flush() file: modules/pymol/locking.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5813 unit: def unblock_flush() file: modules/pymol/locking.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5814 unit: def add_nutate() file: modules/pymol/movie.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 9 id: 5815 unit: def add_scenes() file: modules/pymol/movie.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 9 id: 5816 unit: def produce() file: modules/pymol/movie.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 11 id: 5817 unit: def cealign() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 13 id: 5818 unit: def rms_cur() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 10 id: 5819 unit: def sg_canonicalize() file: modules/pymol/xray.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5820 unit: def mkabbr() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5821 unit: def append() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5822 unit: def scene() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 14 id: 5823 unit: def session_save_views() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5824 unit: def spectrum() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5825 unit: def dihedral() file: modules/pymol/querying.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5826 unit: def deferred_init() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 4 LOC McCabe index: 5 number of parameters: 1 id: 5827 unit: def invert_active_selection() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5828 unit: def get_active_selection_name() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5829 unit: def address() file: modules/chempy/neighbor.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5830 unit: def __write_keys() file: modules/chempy/tinker/state.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5831 unit: def load_model() file: modules/chempy/bmin/state.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5832 unit: def __setstate__() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5833 unit: def updateFromFile() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 5834 unit: def cross_product() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5835 unit: def transform() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5836 unit: def inverse_transform() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5837 unit: def transpose() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5838 unit: def transform_array() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5839 unit: def _decode_string() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 4 LOC McCabe index: 3 number of parameters: 2 id: 5840 unit: def loads() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5841 unit: def __init__() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 5842 unit: def simpleiter() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5843 unit: def asarray() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5844 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 5845 unit: def MakeAtom() file: modules/chempy/cex.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 5846 unit: def __follow_child() file: modules/chempy/cex.py start line: 0 end line: 0 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 5847 unit: def __init__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5848 unit: float mysmoothstep() file: data/shaders/connector.gs start line: 33 end line: 36 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 5849 unit: int PyObject_GenericSetAttrAsItem() file: layer1/P.cpp start line: 563 end line: 565 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 5850 unit: int SceneGetTwoSidedLighting() file: layer1/Scene.cpp start line: 7021 end line: 7023 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5851 unit: void SceneGLClear() file: layer1/Scene.cpp start line: 7179 end line: 7181 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5852 unit: int SceneGetCopyType() file: layer1/Scene.cpp start line: 7233 end line: 7235 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5853 unit: bool SettingLevelCheck() file: layer1/Setting.cpp start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 5854 unit: void FontPurge() file: layer1/Font.cpp start line: 28 end line: 31 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5855 unit: inline uchar CLIP_NORMAL_VALUE() file: layer1/CGO.h start line: 54 end line: 56 size: 3 LOC McCabe index: 3 number of parameters: 1 id: 5856 unit: int op_code() file: layer1/CGO.h start line: 672 end line: 674 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5857 unit: bool is_stop() file: layer1/CGO.h start line: 692 end line: 694 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 5858 unit: inline int CGOAppendNoStop() file: layer1/CGO.h start line: 975 end line: 977 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5859 unit: void SymmetryDump() file: layer1/Symmetry.cpp start line: 228 end line: 230 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5860 unit: bool CButMode::fastDraw() file: layer1/ButMode.cpp start line: 401 end line: 403 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5861 unit: inline bool PConvFromPyObject() file: layer1/PConv.h start line: 300 end line: 302 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 5862 unit: bool OrthoCommandIsEmpty() file: layer1/Ortho.cpp start line: 436 end line: 438 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5863 unit: bool hasMinMax() file: layer1/SettingInfo.h start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5864 unit: float TypeFaceGetDescender() file: layer1/TypeFace.cpp start line: 146 end line: 148 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5865 unit: void TypeFaceFree() file: layer1/TypeFace.cpp start line: 168 end line: 170 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5866 unit: void TypeFree() file: layer1/TypeFace.cpp start line: 177 end line: 179 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5867 unit: float TypeFaceGetDescender() file: layer1/TypeFace.cpp start line: 181 end line: 183 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5868 unit: inline bool _PConvArgsFromPyList_GetItem() file: layer1/PConvArgs.h start line: 100 end line: 102 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 5869 unit: static inline bool masked_byte_equals() file: layer1/FontGLUT.cpp start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 5870 unit: void ObjectUpdate() file: layer1/PyMOLObject.cpp start line: 1158 end line: 1161 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5871 unit: static void ObjectInvalidate() file: layer1/PyMOLObject.cpp start line: 1208 end line: 1211 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 5872 unit: bool next() file: layer1/Rep.h start line: 202 end line: 204 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5873 unit: void set_3f() file: layer1/Setting.h start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5874 unit: inline int SettingGetType() file: layer1/Setting.h start line: 190 end line: 192 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5875 unit: bool next() file: layer1/Setting.h start line: 279 end line: 281 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5876 unit: void SettingUniqueSet() file: layer1/Setting.h start line: 326 end line: 328 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 5877 unit: template V SettingGet() file: layer1/Setting.h start line: 359 end line: 361 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5878 unit: void PrepareViewPortForStereo() file: layer1/SceneRender.cpp start line: 1181 end line: 1183 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 5879 unit: void PrepareViewPortForStereo2nd() file: layer1/SceneRender.cpp start line: 1185 end line: 1187 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 5880 unit: inline void OrthoCommandIn() file: layer1/Ortho.h start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5881 unit: bool strlessnat() file: layer0/Util2.cpp start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5882 unit: inline SomeString PyString_AsSomeString() file: layer0/os_python.h start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5883 unit: inline SomeString PyBytes_AsSomeString() file: layer0/os_python.h start line: 92 end line: 94 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5884 unit: int Block::getWidth() file: layer0/Block.cpp start line: 26 end line: 28 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5885 unit: int Block::getHeight() file: layer0/Block.cpp start line: 31 end line: 33 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5886 unit: bool operator() file: layer0/Util2.h start line: 21 end line: 23 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5887 unit: std::unique_ptr make_unique() file: layer0/LangUtil.h start line: 15 end line: 17 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 5888 unit: std::unique_ptr make_unique() file: layer0/LangUtil.h start line: 20 end line: 22 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5889 unit: int CShaderPrg::Set4fv() file: layer0/ShaderPrg.cpp start line: 277 end line: 279 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5890 unit: int CShaderPrg::Set3fv() file: layer0/ShaderPrg.cpp start line: 280 end line: 282 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5891 unit: int CShaderPrg::SetLightingEnabled() file: layer0/ShaderPrg.cpp start line: 380 end line: 382 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5892 unit: void TextureInitTextTexture() file: layer0/Texture.cpp start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5893 unit: void p_glutGameModeString() file: layer0/os_gl.cpp start line: 160 end line: 162 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5894 unit: void p_glutEnterGameMode() file: layer0/os_gl.cpp start line: 164 end line: 166 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5895 unit: void p_glutLeaveGameMode() file: layer0/os_gl.cpp start line: 168 end line: 170 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5896 unit: void p_glutBitmapCharacter() file: layer0/os_gl.cpp start line: 172 end line: 174 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5897 unit: void p_glutSwapBuffers() file: layer0/os_gl.cpp start line: 176 end line: 178 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5898 unit: void p_glutPopWindow() file: layer0/os_gl.cpp start line: 180 end line: 182 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5899 unit: void p_glutShowWindow() file: layer0/os_gl.cpp start line: 184 end line: 186 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5900 unit: void p_glutHideWindow() file: layer0/os_gl.cpp start line: 188 end line: 190 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5901 unit: void p_glutDestroyWindow() file: layer0/os_gl.cpp start line: 192 end line: 194 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5902 unit: void p_glutFullScreen() file: layer0/os_gl.cpp start line: 202 end line: 204 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5903 unit: void p_glutPostRedisplay() file: layer0/os_gl.cpp start line: 206 end line: 208 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5904 unit: void p_glutInit() file: layer0/os_gl.cpp start line: 210 end line: 212 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5905 unit: void p_glutInitDisplayMode() file: layer0/os_gl.cpp start line: 214 end line: 216 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5906 unit: void p_glutInitDisplayString() file: layer0/os_gl.cpp start line: 218 end line: 220 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5907 unit: void p_glutInitWindowPosition() file: layer0/os_gl.cpp start line: 222 end line: 224 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5908 unit: void p_glutDisplayFunc() file: layer0/os_gl.cpp start line: 242 end line: 244 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5909 unit: void p_glutReshapeFunc() file: layer0/os_gl.cpp start line: 246 end line: 248 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5910 unit: void p_glutKeyboardFunc() file: layer0/os_gl.cpp start line: 250 end line: 252 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5911 unit: void p_glutMouseFunc() file: layer0/os_gl.cpp start line: 254 end line: 256 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5912 unit: void p_glutMotionFunc() file: layer0/os_gl.cpp start line: 258 end line: 260 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5913 unit: void p_glutPassiveMotionFunc() file: layer0/os_gl.cpp start line: 262 end line: 264 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5914 unit: void p_glutSpecialFunc() file: layer0/os_gl.cpp start line: 266 end line: 268 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5915 unit: void p_glutPositionWindow() file: layer0/os_gl.cpp start line: 275 end line: 277 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5916 unit: void p_glutGameModeString() file: layer0/os_gl.cpp start line: 309 end line: 311 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5917 unit: void p_glutEnterGameMode() file: layer0/os_gl.cpp start line: 313 end line: 315 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5918 unit: void p_glutLeaveGameMode() file: layer0/os_gl.cpp start line: 317 end line: 319 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5919 unit: void p_glutMainLoop() file: layer0/os_gl.cpp start line: 368 end line: 372 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5920 unit: void p_glutPopWindow() file: layer0/os_gl.cpp start line: 388 end line: 390 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5921 unit: void p_glutShowWindow() file: layer0/os_gl.cpp start line: 392 end line: 394 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5922 unit: void p_glutHideWindow() file: layer0/os_gl.cpp start line: 396 end line: 398 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5923 unit: void p_glutDestroyWindow() file: layer0/os_gl.cpp start line: 400 end line: 402 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5924 unit: void p_glutFullScreen() file: layer0/os_gl.cpp start line: 410 end line: 412 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5925 unit: void p_glutInit() file: layer0/os_gl.cpp start line: 419 end line: 421 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5926 unit: void p_glutInitDisplayMode() file: layer0/os_gl.cpp start line: 423 end line: 425 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5927 unit: void p_glutInitDisplayString() file: layer0/os_gl.cpp start line: 427 end line: 429 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5928 unit: void p_glutInitWindowPosition() file: layer0/os_gl.cpp start line: 431 end line: 433 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5929 unit: void p_glutPositionWindow() file: layer0/os_gl.cpp start line: 491 end line: 493 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5930 unit: void disableShaders() file: layer0/ShaderMgr.cpp start line: 250 end line: 253 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5931 unit: int CShaderMgr::ShaderPrgExists() file: layer0/ShaderMgr.cpp start line: 970 end line: 972 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5932 unit: int CShaderMgr::ShadersPresent() file: layer0/ShaderMgr.cpp start line: 974 end line: 976 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5933 unit: int CShaderMgr::GeometryShadersPresent() file: layer0/ShaderMgr.cpp start line: 978 end line: 980 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5934 unit: void CShaderMgr::SetIsPicking() file: layer0/ShaderMgr.cpp start line: 1411 end line: 1413 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5935 unit: int CShaderMgr::GetIsPicking() file: layer0/ShaderMgr.cpp start line: 1414 end line: 1416 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5936 unit: void CShaderMgr::Set_Reload_Bits() file: layer0/ShaderMgr.cpp start line: 1574 end line: 1576 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5937 unit: static int tex_format_internal_byte() file: layer0/GenericBuffer.cpp start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5938 unit: static int tex_format_internal_float() file: layer0/GenericBuffer.cpp start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5939 unit: static int tex_format_internal_half_float() file: layer0/GenericBuffer.cpp start line: 98 end line: 100 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5940 unit: void frameBuffer_t::bind() file: layer0/GenericBuffer.cpp start line: 326 end line: 328 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5941 unit: float ave3() file: layer0/Vector.cpp start line: 2092 end line: 2094 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 5942 unit: float ave2() file: layer0/Vector.cpp start line: 2095 end line: 2097 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5943 unit: void maskAttributes() file: layer0/GenericBuffer.h start line: 496 end line: 498 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5944 unit: void maskAttribute() file: layer0/GenericBuffer.h start line: 500 end line: 502 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5945 unit: void bind() file: layer0/GenericBuffer.h start line: 527 end line: 529 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5946 unit: void unbind() file: layer0/GenericBuffer.h start line: 531 end line: 533 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5947 unit: inline lexidx_t LexIdx() file: layer0/Lex.h start line: 28 end line: 30 size: 3 LOC McCabe index: 3 number of parameters: 2 id: 5948 unit: inline float dot_product3f() file: layer0/Vector.h start line: 321 end line: 323 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5949 unit: inline void invert3f() file: layer0/Vector.h start line: 331 end line: 333 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5950 unit: inline float lengthsq3f() file: layer0/Vector.h start line: 385 end line: 387 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5951 unit: inline float length3f() file: layer0/Vector.h start line: 417 end line: 419 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5952 unit: inline float length2f() file: layer0/Vector.h start line: 421 end line: 423 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5953 unit: void VLASize2() file: layer0/MemoryDebug.h start line: 115 end line: 117 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5954 unit: void VLASizeForSure2() file: layer0/MemoryDebug.h start line: 120 end line: 122 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5955 unit: static bool isArrayEqual() file: layerCTest/Test.h start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 5956 unit: template static bool isNullptr() file: layerCTest/Test.h start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5957 unit: void StrBlockFreeStr() file: contrib/champ/strblock.c start line: 85 end line: 88 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5958 unit: static void ChampCapsuleFree() file: contrib/champ/champ_module.c start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5959 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c start line: 606 end line: 608 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5960 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c start line: 417 end line: 419 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5961 unit: static int get_properties_input() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 1992 end line: 1995 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5962 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c start line: 4888 end line: 4890 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5963 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp start line: 738 end line: 740 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5964 unit: static int fio_fclose() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 288 end line: 290 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5965 unit: static fio_size_t fio_fseek() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 316 end line: 318 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 5966 unit: static fio_size_t fio_ftell() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 320 end line: 322 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5967 unit: static int fio_fclose() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 406 end line: 408 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5968 unit: static fio_size_t fio_ftell() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 592 end line: 594 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5969 unit: static int fio_write_int32() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 601 end line: 603 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5970 unit: static int fio_read_int32() file: contrib/uiuc/plugins/molfile_plugin/src/fastio.h start line: 605 end line: 607 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5971 unit: static void sfree() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 162 end line: 164 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 5972 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c start line: 1292 end line: 1294 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5973 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c start line: 253 end line: 255 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5974 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp start line: 177 end line: 179 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5975 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c start line: 335 end line: 337 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5976 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c start line: 1116 end line: 1118 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5977 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp start line: 708 end line: 710 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5978 unit: static int iswhiteline() file: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h start line: 895 end line: 897 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5979 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c start line: 1986 end line: 1988 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5980 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c start line: 324 end line: 326 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5981 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c start line: 189 end line: 191 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5982 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c start line: 261 end line: 263 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5983 unit: VMDEXTERNSTATIC int hash_entries() file: contrib/uiuc/plugins/molfile_plugin/src/hash.c start line: 223 end line: 225 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5984 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c start line: 742 end line: 744 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5985 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c start line: 321 end line: 323 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5986 unit: void free_other_elements_ply() file: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h start line: 1246 end line: 1249 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5987 unit: static void addCoordinates() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1206 end line: 1208 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5988 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp start line: 1468 end line: 1470 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5989 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c start line: 1178 end line: 1180 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5990 unit: VMDEXTERNSTATIC int inthash_entries() file: contrib/uiuc/plugins/molfile_plugin/src/inthash.c start line: 222 end line: 224 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5991 unit: static bool badversion() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5992 unit: double sfxp_ulp32flt() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 140 end line: 142 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5993 unit: uint32_t hibytes() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 226 end line: 228 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 5994 unit: uint64_t alignInteger() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 278 end line: 280 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5995 unit: void rawdump() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 539 end line: 541 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5996 unit: void rawload() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 544 end line: 546 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 5997 unit: static inline std::string addslash() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 649 end line: 651 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 5998 unit: uint64_t key_record_t::size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 923 end line: 925 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 5999 unit: uint64_t key_record_t::offset() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 926 end line: 928 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6000 unit: double key_record_t::time() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 929 end line: 931 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6001 unit: std::string DtrReader::framefile() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1113 end line: 1115 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6002 unit: static double dotprod() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 1216 end line: 1218 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6003 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp start line: 2309 end line: 2311 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6004 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp start line: 669 end line: 671 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6005 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp start line: 611 end line: 613 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6006 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c start line: 419 end line: 421 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6007 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c start line: 1446 end line: 1448 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6008 unit: static int mdio_errno() file: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h start line: 399 end line: 401 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6009 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c start line: 290 end line: 292 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6010 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c start line: 746 end line: 748 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6011 unit: static void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp start line: 287 end line: 289 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6012 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c start line: 282 end line: 284 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6013 unit: virtual ~DtrReader() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 222 end line: 224 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6014 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c start line: 259 end line: 261 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6015 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c start line: 292 end line: 294 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6016 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/corplugin.c start line: 394 end line: 396 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6017 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c start line: 1334 end line: 1336 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6018 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c start line: 457 end line: 459 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6019 unit: static bool issingle() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 154 end line: 156 size: 3 LOC McCabe index: 4 number of parameters: 1 id: 6020 unit: void Tokenizer::next() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 369 end line: 371 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6021 unit: unsigned Tokenizer::line() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 377 end line: 379 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6022 unit: double dotprod() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 659 end line: 661 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6023 unit: static void get_int() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 791 end line: 793 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6024 unit: static void get_float() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 794 end line: 796 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6025 unit: virtual ~Block() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1096 end line: 1098 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 6026 unit: void fill_nameless() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1278 end line: 1280 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6027 unit: void write_ct_ffio_footer() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1475 end line: 1477 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6028 unit: void close_file_read() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 1866 end line: 1868 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6029 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 2051 end line: 2053 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6030 unit: void assign_bigendian_4() file: contrib/mmtf-c/mmtf_parser.cpp start line: 343 end line: 345 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6031 unit: void assign_bigendian_2() file: contrib/mmtf-c/mmtf_parser.cpp start line: 348 end line: 350 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6032 unit: bool MMTF_parser_compare_msgpack_string_char_array() file: contrib/mmtf-c/mmtf_parser.cpp start line: 863 end line: 866 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6033 unit: def run() file: setup.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6034 unit: def copy() file: setup.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 3 id: 6035 unit: inline char makeInscode() file: layer2/AtomInfo.h start line: 205 end line: 207 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6036 unit: bool isHydrogen() file: layer2/AtomInfo.h start line: 292 end line: 294 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6037 unit: void setInscode() file: layer2/AtomInfo.h start line: 312 end line: 314 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6038 unit: inline bool AtomResiFromResv() file: layer2/AtomInfo.h start line: 418 end line: 420 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6039 unit: int AtomInfoCheckSetting() file: layer2/AtomInfo.h start line: 467 end line: 469 size: 3 LOC McCabe index: 2 number of parameters: 3 id: 6040 unit: void set() file: layer2/CifBondDict.h start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6041 unit: void set_unknown() file: layer2/CifBondDict.h start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6042 unit: void set() file: layer2/CifBondDict.h start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 6043 unit: void set() file: layer2/CifBondDict.h start line: 119 end line: 121 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 6044 unit: bool empty() file: layer2/CifBondDict.h start line: 130 end line: 132 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6045 unit: bool active() file: layer2/RepCartoon.cpp start line: 2802 end line: 2804 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 6046 unit: void RepDotInit() file: layer2/RepDot.cpp start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6047 unit: bool is_polypeptide() file: layer2/CifMoleculeReader.cpp start line: 129 end line: 131 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6048 unit: static int ObjectMeshStateMapExists() file: layer2/ObjectMesh.cpp start line: 85 end line: 87 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6049 unit: std::vector ObjectMapGetCCP4Str() file: layer2/ObjectMap.h start line: 179 end line: 181 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 6050 unit: template void SettingSet() file: layer2/CoordSet.h start line: 220 end line: 222 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6051 unit: lexidx_int_t to_lexidx_int() file: layer2/AtomInfoHistory.h start line: 269 end line: 271 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6052 unit: inline void copy_attr_s() file: layer2/AtomInfoHistory.h start line: 284 end line: 286 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6053 unit: template inline void copy_attr_s() file: layer2/AtomInfoHistory.h start line: 287 end line: 289 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6054 unit: void RepRibbonInit() file: layer2/RepRibbon.cpp start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6055 unit: static bool iswhitespace0() file: layer2/CifFile.cpp start line: 41 end line: 43 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6056 unit: static bool iswhitespace() file: layer2/CifFile.cpp start line: 46 end line: 48 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6057 unit: static bool islinefeed() file: layer2/CifFile.cpp start line: 51 end line: 53 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6058 unit: static bool islinefeed0() file: layer2/CifFile.cpp start line: 56 end line: 58 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6059 unit: static bool isquote() file: layer2/CifFile.cpp start line: 61 end line: 63 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6060 unit: int cif_array::get_nrows() file: layer2/CifFile.cpp start line: 115 end line: 117 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6061 unit: void RepMeshInit() file: layer2/RepMesh.cpp start line: 61 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6062 unit: bool operator() file: layer2/CifFile.h start line: 19 end line: 21 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6063 unit: bool is_missing() file: layer2/CifFile.h start line: 107 end line: 109 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6064 unit: void GadgetSetStrip() file: layer2/GadgetSet.cpp start line: 423 end line: 425 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6065 unit: void RepNonbondedSphereInit() file: layer2/RepNonbondedSphere.cpp start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6066 unit: static float CLAMP_VALUE() file: layer2/RepLabel.cpp start line: 138 end line: 140 size: 3 LOC McCabe index: 2 number of parameters: 3 id: 6067 unit: void Clip2DLine() file: layer2/RepLabel.cpp start line: 323 end line: 325 size: 3 LOC McCabe index: 1 number of parameters: 5 id: 6068 unit: inline bool is_pqr_file() file: layer2/ObjectMolecule.h start line: 153 end line: 155 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6069 unit: template void SettingSet() file: layer2/ObjectMolecule.h start line: 533 end line: 535 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 6070 unit: void PyMOL_ConfigureShadersGL_WithoutLock() file: layer5/PyMOL.cpp start line: 2105 end line: 2108 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6071 unit: int getIndex() file: layer3/Selector.h start line: 220 end line: 222 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 6072 unit: int getAtm() file: layer3/AtomIterators.h start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6073 unit: int getIdx() file: layer3/AtomIterators.h start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6074 unit: bool isMultistate() file: layer3/AtomIterators.h start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6075 unit: bool isPerObject() file: layer3/AtomIterators.h start line: 100 end line: 102 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6076 unit: void setPerObject() file: layer3/AtomIterators.h start line: 104 end line: 106 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6077 unit: void reset() file: layer3/AtomIterators.h start line: 167 end line: 169 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6078 unit: static bool PConvFromPyObject() file: layer3/MovieScene.cpp start line: 786 end line: 788 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6079 unit: static bool PConvFromPyObject() file: layer3/MovieScene.cpp start line: 790 end line: 792 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6080 unit: void SeleAtomIterator::reset() file: layer3/AtomIterators.cpp start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6081 unit: int getTmpID() file: layer3/MoleculeExporter.cpp start line: 204 end line: 206 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6082 unit: int getTmpID() file: layer3/MoleculeExporter.cpp start line: 211 end line: 213 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6083 unit: bool MoleculeExporter::isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 260 end line: 262 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6084 unit: bool MoleculeExporter::isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 263 end line: 265 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6085 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 445 end line: 449 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6086 unit: bool isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 567 end line: 570 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6087 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 595 end line: 597 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6088 unit: void writeBonds() file: layer3/MoleculeExporter.cpp start line: 697 end line: 704 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6089 unit: bool isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 706 end line: 710 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6090 unit: bool isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 760 end line: 762 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6091 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 772 end line: 775 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6092 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 902 end line: 905 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6093 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 937 end line: 940 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6094 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 1058 end line: 1061 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6095 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 1239 end line: 1242 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6096 unit: bool isExcludedBond() file: layer3/MoleculeExporter.cpp start line: 1272 end line: 1275 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6097 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 1291 end line: 1293 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6098 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 1477 end line: 1480 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6099 unit: int getMultiDefault() file: layer3/MoleculeExporter.cpp start line: 1558 end line: 1561 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6100 unit: function f() file: modules/web/javascript/json2.js start line: 163 end line: 166 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6101 unit: Boolean.prototype.toJSON = function() file: modules/web/javascript/json2.js start line: 182 end line: 184 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6102 unit: this.getBufferJSON = function() file: modules/web/javascript/pymol.js start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6103 unit: this.getBufferURL = function() file: modules/web/javascript/pymol.js start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6104 unit: this._json = function() file: modules/web/javascript/pymol.js start line: 173 end line: 175 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6105 unit: this.apply_cmd = function() file: modules/web/javascript/pymol.js start line: 221 end line: 223 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 6106 unit: def _set() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6107 unit: def dropEvent() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6108 unit: def make_pymol_qicon() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6109 unit: def get_object_names() file: modules/pmg_qt/properties_dialog.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6110 unit: def askopenfilenames() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6111 unit: def askopenfiles() file: modules/pmg_qt/mimic_tk.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6112 unit: def convertX() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6113 unit: def convertY() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6114 unit: def yToAlpha() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6115 unit: def __init__() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6116 unit: def __init__() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6117 unit: def __init__() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6118 unit: def cleanup() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6119 unit: def __init__() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6120 unit: def repeat() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6121 unit: def cleanup() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6122 unit: def __init__() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6123 unit: def combine() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6124 unit: def __init__() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6125 unit: def combine() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6126 unit: def cleanup() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6127 unit: def do_store() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6128 unit: def do_recall() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6129 unit: def do_swap() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6130 unit: def cleanup() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6131 unit: def doZoom() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6132 unit: def createBond() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6133 unit: def __init__() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6134 unit: def file_save_map() file: modules/pmg_qt/file_dialogs.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6135 unit: double norm2() file: modules/cealign/src/tnt/jama_svd.h start line: 508 end line: 510 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6136 unit: double cond() file: modules/cealign/src/tnt/jama_svd.h start line: 514 end line: 516 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6137 unit: Vector getPivot() file: modules/cealign/src/tnt/tnt_linalg.h start line: 1429 end line: 1431 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6138 unit: double norm2() file: modules/cealign/src/tnt/tnt_linalg.h start line: 2337 end line: 2339 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6139 unit: double cond() file: modules/cealign/src/tnt/tnt_linalg.h start line: 2343 end line: 2345 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6140 unit: Array1D getPivot() file: modules/cealign/src/tnt/jama_lu.h start line: 205 end line: 207 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6141 unit: def asksaveasfilename() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6142 unit: def inc_fontsize() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6143 unit: def set_current_session_file() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6144 unit: def quit_app() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6145 unit: def dump() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6146 unit: def edit_pymolrc() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6147 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6148 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6149 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6150 unit: def cleanup() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6151 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6152 unit: def repeat() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6153 unit: def cleanup() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6154 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6155 unit: def combine() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6156 unit: def __init__() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6157 unit: def combine() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6158 unit: def cleanup() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6159 unit: def do_store() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6160 unit: def do_recall() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6161 unit: def do_swap() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6162 unit: def cleanup() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6163 unit: def nextRow() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6164 unit: def __init__() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 6165 unit: def pack_and_show() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6166 unit: def accept() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6167 unit: def valueToCanvas() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6168 unit: def canvasToValue() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6169 unit: def vaToCanvas() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6170 unit: def canvasToVA() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6171 unit: def update_va_from_canvas() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6172 unit: def ramp_changed() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6173 unit: def quit_app() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6174 unit: def _initializePlugins() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6175 unit: def runSkin() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6176 unit: def cancelbutton() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6177 unit: def newfilter() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6178 unit: def newdir() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6179 unit: def getRampName() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 3 LOC McCabe index: 3 number of parameters: 1 id: 6180 unit: def getGradName() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 3 LOC McCabe index: 3 number of parameters: 1 id: 6181 unit: def getIsoPosName() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 3 LOC McCabe index: 3 number of parameters: 1 id: 6182 unit: def getIsoNegName() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 3 LOC McCabe index: 3 number of parameters: 1 id: 6183 unit: def __init__() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6184 unit: def metaphorics() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6185 unit: def decorator() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6186 unit: def _get_color_sc() file: modules/pymol/internal.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6187 unit: def _nt_expandvars() file: modules/pymol/cmd.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6188 unit: def exp_path() file: modules/pymol/cmd.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6189 unit: def morph() file: modules/pymol/morphing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 11 id: 6190 unit: def _setup_history() file: modules/pymol/_gui.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6191 unit: def sculpt_activate() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 5 id: 6192 unit: def smooth() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6193 unit: def fuse() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6194 unit: def edit() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6195 unit: def replace() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6196 unit: def dss() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6197 unit: def alter_state() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6198 unit: def iterate_state() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6199 unit: def translate() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 6200 unit: def rotate() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 6201 unit: def set_object_ttt() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 6 id: 6202 unit: def transform_selection() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6203 unit: def transform_object() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6204 unit: def update() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6205 unit: def map_set() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6206 unit: def fix_chemistry() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 5 id: 6207 unit: def alphatoall() file: modules/pymol/editing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 5 id: 6208 unit: def ep_reshape() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6209 unit: def ep_draw() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6210 unit: def ep_idle() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6211 unit: def ep_set_swap_callback() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6212 unit: def pst() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6213 unit: def CheckPyMOL() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6214 unit: def incentive_format_not_available_func() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6215 unit: def filename_to_objectname() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6216 unit: def auto_zoom() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 4 number of parameters: 4 id: 6217 unit: def load_object() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 6218 unit: def load_brick() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6219 unit: def load_map() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6220 unit: def read_sdfstr() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6221 unit: def read_molstr() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6222 unit: def read_pdbstr() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6223 unit: def read_mol2str() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 6224 unit: def read_xplorstr() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6225 unit: def load_mtz() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 6226 unit: def load_cc1() file: modules/pymol/importing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 4 id: 6227 unit: def assign_stereo() file: modules/pymol/stereochemistry/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 6 id: 6228 unit: def pref_set() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6229 unit: def autoload() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6230 unit: def show() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6231 unit: def installplugin() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6232 unit: def disable_load_button() file: modules/pymol/plugins/managergui_qt.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6233 unit: def plugin_load() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6234 unit: def list_indexfile() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6235 unit: def __init__() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6236 unit: def get_full_url() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6237 unit: def toggle() file: modules/pymol/wizard/toggle.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6238 unit: def get_prompt() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6239 unit: def delete_box() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6240 unit: def set_current() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6241 unit: def apply_input() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6242 unit: def bench_fn() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6243 unit: def report() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6244 unit: def run_all() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6245 unit: def get_prompt() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6246 unit: def set_status() file: modules/pymol/wizard/charge.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6247 unit: def get_prompt() file: modules/pymol/wizard/message.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6248 unit: def set_target() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6249 unit: def set_ligand() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6250 unit: def update() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6251 unit: def clear() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6252 unit: def set_status() file: modules/pymol/wizard/cleanup.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6253 unit: def get_prompt() file: modules/pymol/wizard/pseudoatom.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6254 unit: def set_track() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6255 unit: def set_map() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6256 unit: def do_position() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6257 unit: def do_dirty() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6258 unit: def set_mode() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6259 unit: def toggle_messages() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6260 unit: def do_pick() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6261 unit: def do_pick() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6262 unit: def check_object_dict() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 3 LOC McCabe index: 3 number of parameters: 1 id: 6263 unit: def get_ident() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6264 unit: def forward() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6265 unit: def backward() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6266 unit: def get_prompt() file: modules/pymol/wizard/renaming.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6267 unit: def get_prompt() file: modules/pymol/wizard/fedora.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6268 unit: def cleanup() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6269 unit: def set_status() file: modules/pymol/wizard/pair_fit.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6270 unit: def get_prompt() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6271 unit: def __enter__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6272 unit: def focusNextPrevChild() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6273 unit: def _mainThreadAction() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6274 unit: def __init__() file: modules/pymol/headering.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6275 unit: def __init__() file: modules/pymol/headering.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6276 unit: def getColumns() file: modules/pymol/headering.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6277 unit: def getColumnsOfType() file: modules/pymol/headering.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6278 unit: def set_bond() file: modules/pymol/setting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 6279 unit: def set() file: modules/pymol/setting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6280 unit: def get_bond() file: modules/pymol/setting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6281 unit: def callout() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6282 unit: def write() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6283 unit: def splash() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6284 unit: def mat_reset() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6285 unit: def get_default_key() file: modules/pymol/parser.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6286 unit: def complete() file: modules/pymol/parser.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6287 unit: def png() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 9 id: 6288 unit: def multisave() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6289 unit: def get_str() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6290 unit: def get_bytes() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6291 unit: def multifilesave() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 8 id: 6292 unit: def save() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6293 unit: def simple_show() file: modules/pymol/menu.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6294 unit: def simple_hide() file: modules/pymol/menu.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6295 unit: def by_elem5() file: modules/pymol/menu.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6296 unit: def by_elem6() file: modules/pymol/menu.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6297 unit: def slice_color() file: modules/pymol/menu.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6298 unit: def _server_thread() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6299 unit: def map_generate() file: modules/pymol/creating.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6300 unit: def ramp_new() file: modules/pymol/creating.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 11 id: 6301 unit: def isomesh() file: modules/pymol/creating.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6302 unit: def volume() file: modules/pymol/creating.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6303 unit: def isodot() file: modules/pymol/creating.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6304 unit: def vol_ramp_sc() file: modules/pymol/completing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6305 unit: def interrupt() file: modules/pymol/locking.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6306 unit: def extra_fit() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6307 unit: def rms() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6308 unit: def fab() file: modules/pymol/editor.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 14 id: 6309 unit: def build_peptide() file: modules/pymol/editor.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6310 unit: def load_pdbml() file: modules/pymol/lazyio.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6311 unit: def load_cml() file: modules/pymol/lazyio.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6312 unit: def __delitem__() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6313 unit: def createlegacypmgapp() file: modules/pymol/gui.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6314 unit: def load_aln_multi() file: modules/pymol/seqalign.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 7 id: 6315 unit: def get_scene_list() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6316 unit: def ray() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 10 id: 6317 unit: def spectrumany() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6318 unit: def clean_obj() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6319 unit: def __enter__() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6320 unit: def __del__() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6321 unit: def start() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6322 unit: def reset_fragile() file: modules/chempy/tinker/state.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6323 unit: def amin() file: modules/chempy/bmin/commands.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6324 unit: def get_mass() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6325 unit: def get_number() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6326 unit: def get_signature() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6327 unit: def delete() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6328 unit: def project() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6329 unit: def remove_component() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6330 unit: def __init__() file: modules/chempy/cif.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6331 unit: def __init__() file: modules/chempy/cif.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6332 unit: def __repr__() file: modules/chempy/cif.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6333 unit: def __init__() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 3 id: 6334 unit: def __init__() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6335 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6336 unit: def encode_int() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 6337 unit: def from_url() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6338 unit: def needquote() file: modules/chempy/cex.py start line: 0 end line: 0 size: 3 LOC McCabe index: 2 number of parameters: 2 id: 6339 unit: def __init__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6340 unit: def __init__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6341 unit: def __init__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6342 unit: def selectProperty() file: modules/chempy/cex.py start line: 0 end line: 0 size: 3 LOC McCabe index: 3 number of parameters: 2 id: 6343 unit: def __init__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6344 unit: def __setitem__() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 6345 unit: def server_test() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6346 unit: void setBG() file: data/shaders/connector.gs start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6347 unit: def lightingsettings() file: data/startup/lightingsettings_gui/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 6348 unit: def __init_plugin__() file: data/startup/lightingsettings_gui/__init__.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6349 unit: def update() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 6350 unit: def getDoubleValue() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 6351 unit: inline void _PConvArgsToPyList_SetItem() file: layer1/PConvArgs.h start line: 22 end line: 23 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6352 unit: def get_pymol_version() file: setup.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6353 unit: def get_sources() file: setup.py start line: 0 end line: 0 size: 2 LOC McCabe index: 4 number of parameters: 3 id: 6354 unit: virtual ~MoleculeExporter() file: layer3/MoleculeExporter.cpp start line: 173 end line: 174 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6355 unit: def __getattr__() file: create_shadertext.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6356 unit: def __enter__() file: create_shadertext.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6357 unit: def __exit__() file: create_shadertext.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6358 unit: def __del__() file: create_shadertext.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6359 unit: def sizeHint() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6360 unit: def _get() file: modules/pmg_qt/TextEditor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6361 unit: def closeEvent() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6362 unit: def mouseDoubleClickEvent() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6363 unit: def initialdir() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6364 unit: def file_save_wrl() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6365 unit: def file_save_dae() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6366 unit: def file_save_pov() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6367 unit: def file_save_mpng() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6368 unit: def file_save_mov() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6369 unit: def log_append() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6370 unit: def confirm_quit() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6371 unit: def command_get() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6372 unit: def command_get() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6373 unit: def command_set() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6374 unit: def command_set_cursor() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6375 unit: def dragMoveEvent() file: modules/pmg_qt/pymol_qt_gui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6376 unit: def createEditor() file: modules/pmg_qt/properties_dialog.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6377 unit: def __init__() file: modules/pmg_qt/properties_dialog.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6378 unit: def __enter__() file: modules/pmg_qt/properties_dialog.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6379 unit: def __exit__() file: modules/pmg_qt/properties_dialog.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6380 unit: def sizeHint() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6381 unit: def mouseReleaseEvent() file: modules/pmg_qt/pymol_gl_widget.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6382 unit: def sizeHint() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6383 unit: def toggleRealTimeUpdates() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6384 unit: def xToData() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6385 unit: def dataToX() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6386 unit: def displayHelp() file: modules/pmg_qt/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6387 unit: def setActionHash() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6388 unit: def get_prompt() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6389 unit: def getRepeating() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6390 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6391 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6392 unit: def cleanup() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6393 unit: def toggle() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6394 unit: def reset() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6395 unit: def undo() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6396 unit: def redo() file: modules/pmg_qt/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6397 unit: def __init__() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6398 unit: def addmenu() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6399 unit: def execute() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 2 id: 6400 unit: def my_show() file: modules/pmg_qt/mimic_pmg_tk.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6401 unit: def _get() file: modules/pmg_tk/TextEditor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6402 unit: def setup() file: modules/pmg_tk/skins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6403 unit: def takedown() file: modules/pmg_tk/skins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6404 unit: def get_val() file: modules/pmg_tk/skins/normal/ModalWindow.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6405 unit: def _darwin_browser_open() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6406 unit: def initialdir() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6407 unit: def destroyDataArea() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6408 unit: def destroyCommandArea() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6409 unit: def destroyMessageBar() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6410 unit: def my_show() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6411 unit: def command_get() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6412 unit: def command_set() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6413 unit: def command_set_cursor() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6414 unit: def abort() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6415 unit: def rebuild() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6416 unit: def settings_edit_all_dialog() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6417 unit: def edit_colors_dialog() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6418 unit: def __init__() file: modules/pmg_tk/skins/normal/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6419 unit: def setActionHash() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6420 unit: def get_prompt() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6421 unit: def getRepeating() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6422 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6423 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6424 unit: def cleanup() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6425 unit: def toggle() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6426 unit: def reset() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6427 unit: def undo() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6428 unit: def doVdw() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6429 unit: def doElectro() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6430 unit: def warn() file: modules/pmg_tk/skins/normal/builder.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6431 unit: def update() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6432 unit: def show() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6433 unit: def set_amplitudes() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6434 unit: def set_phases() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6435 unit: def set_weights() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6436 unit: def set_min_res() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6437 unit: def set_max_res() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6438 unit: def set_fofc() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6439 unit: def set_name_prefix() file: modules/pmg_tk/PyMOLMapLoad.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6440 unit: def __getstate__() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6441 unit: def alpha() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6442 unit: def decrement() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6443 unit: def popup_help() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6444 unit: def vmin() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6445 unit: def vmax() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6446 unit: def vmin() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6447 unit: def vmax() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6448 unit: def amax() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6449 unit: def ramp_changed() file: modules/pmg_tk/volume.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6450 unit: def initializeTk_win32() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6451 unit: def initializeTk_mac() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6452 unit: def initializeTk_unix() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6453 unit: def execute() file: modules/pmg_tk/PMGApp.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6454 unit: def getMolecules() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 3 number of parameters: 0 id: 6455 unit: def getMaps() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 3 number of parameters: 0 id: 6456 unit: def setPsizeLocation() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6457 unit: def setBinaryLocation() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6458 unit: def setWebApbsLocation() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6459 unit: def setPdb2pqrLocation() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6460 unit: def setPymolGeneratedPqrFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6461 unit: def setPymolGeneratedPdbFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6462 unit: def setPymolGeneratedDxFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6463 unit: def setPymolGeneratedInFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6464 unit: def getPymolGeneratedPqrFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6465 unit: def getPymolGeneratedPdbFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6466 unit: def getPymolGeneratedDxFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6467 unit: def getPymolGeneratedInFilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6468 unit: def showAppModal() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6469 unit: def quit() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6470 unit: def newfilename() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6471 unit: def setfilter() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6472 unit: def setdir() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6473 unit: def validate() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6474 unit: def showMolSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6475 unit: def hideMolSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6476 unit: def showPosSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6477 unit: def hidePosSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6478 unit: def showNegSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6479 unit: def hideNegSurface() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6480 unit: def showFieldLines() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6481 unit: def hideFieldLines() file: modules/pmg_tk/startup/apbs_tools.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6482 unit: def cancel() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6483 unit: def cancel() file: modules/pmg_tk/ColorEditor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6484 unit: def SetFormalCharge() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6485 unit: def SetHcount() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6486 unit: def SetAtomicMass() file: modules/pymol/m4x.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6487 unit: def __call__() file: modules/pymol/callback.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6488 unit: def get_extent() file: modules/pymol/callback.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6489 unit: def config_mouse() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6490 unit: def find() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6491 unit: def order() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6492 unit: def mouse() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6493 unit: def edit_mode() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6494 unit: def set_key() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6495 unit: def button() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6496 unit: def mask() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6497 unit: def unmask() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6498 unit: def _do() file: modules/pymol/internal.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6499 unit: def _ctrl() file: modules/pymol/internal.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6500 unit: def _alt() file: modules/pymol/internal.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6501 unit: def _ctsh() file: modules/pymol/internal.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6502 unit: def _invalidate_color_sc() file: modules/pymol/internal.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6503 unit: def _sdof() file: modules/pymol/internal.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6504 unit: def get_font() file: modules/pymol/vfont.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6505 unit: def accept() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6506 unit: def decline() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6507 unit: def get_movie_playing() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6508 unit: def mdump() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6509 unit: def mtoggle() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6510 unit: def mstop() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6511 unit: def mplay() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6512 unit: def mdo() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6513 unit: def mappend() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6514 unit: def mclear() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6515 unit: def frame() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6516 unit: def mmove() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6517 unit: def mcopy() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6518 unit: def mdelete() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6519 unit: def minsert() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6520 unit: def madd() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6521 unit: def mset() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6522 unit: def mmatrix() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6523 unit: def forward() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6524 unit: def backward() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6525 unit: def rewind() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6526 unit: def set_frame() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6527 unit: def ending() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6528 unit: def middle() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6529 unit: def get_state() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6530 unit: def get_frame() file: modules/pymol/moving.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6531 unit: def parse_arg() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6532 unit: def run() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6533 unit: def spawn() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6534 unit: def _print_exc() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6535 unit: def split() file: modules/pymol/parsing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6536 unit: def sculpt_purge() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6537 unit: def sculpt_deactivate() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6538 unit: def split_states() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6539 unit: def sculpt_iterate() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6540 unit: def set_state_order() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6541 unit: def set_discrete() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6542 unit: def set_symmetry() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 10 id: 6543 unit: def set_name() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6544 unit: def set_geometry() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6545 unit: def undo() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6546 unit: def push_undo() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6547 unit: def redo() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6548 unit: def bond() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6549 unit: def invert() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6550 unit: def unbond() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6551 unit: def remove() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6552 unit: def remove_picked() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6553 unit: def cycle_valence() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6554 unit: def attach() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6555 unit: def unpick() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6556 unit: def drag() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6557 unit: def torsion() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6558 unit: def h_fill() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6559 unit: def h_fix() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6560 unit: def h_add() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6561 unit: def sort() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6562 unit: def rename() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6563 unit: def alter() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6564 unit: def alter_list() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6565 unit: def iterate() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6566 unit: def set_title() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6567 unit: def matrix_reset() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6568 unit: def set_dihedral() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 8 id: 6569 unit: def map_set_border() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6570 unit: def map_double() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6571 unit: def map_halve() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6572 unit: def map_trim() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6573 unit: def protect() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6574 unit: def deprotect() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6575 unit: def flag() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6576 unit: def vdw_fit() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6577 unit: def split_chains() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6578 unit: def mse2met() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6579 unit: def uniquify() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6580 unit: def copy_to() file: modules/pymol/editing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6581 unit: def SetSize() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6582 unit: def OnChar() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6583 unit: def OnSpecial() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6584 unit: def OnPaint() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6585 unit: def OnMouseDown() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6586 unit: def OnMouseUp() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6587 unit: def OnMouseMotion() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6588 unit: def OnDraw() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6589 unit: def OnIdle() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6590 unit: def GetRedisplay() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6591 unit: def CheckPyMOL() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6592 unit: def Repaint() file: modules/pymol/embed/epymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6593 unit: def ep_get_pymol() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6594 unit: def ep_swap_dummy() file: modules/pymol/embed/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6595 unit: def OnSetFocus() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6596 unit: def OnKillFocus() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6597 unit: def ProcessEvent() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6598 unit: def OnEraseBackground() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6599 unit: def Repaint() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6600 unit: def OnDraw() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6601 unit: def OnMove() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6602 unit: def OnExit() file: modules/pymol/embed/wxpymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6603 unit: def space() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6604 unit: def load_callback() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6605 unit: def load_cgo() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6606 unit: def load_model() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6607 unit: def read_mmodstr() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6608 unit: def finish_object() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6609 unit: def load_coordset() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6610 unit: def load_coords() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6611 unit: def load_idx() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6612 unit: def loadall() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6613 unit: def load_mmtf() file: modules/pymol/importing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6614 unit: def diagnostics() file: modules/pymol/diagnosing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6615 unit: def pref_get() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6616 unit: def plugin_load() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6617 unit: def __repr__() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6618 unit: def autoload() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6619 unit: def module() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6620 unit: def loaded() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6621 unit: def is_temporary() file: modules/pymol/plugins/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6622 unit: def children() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6623 unit: def pack() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6624 unit: def plugin_info() file: modules/pymol/plugins/managergui.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6625 unit: def __init__() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6626 unit: def list_scan() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6627 unit: def fetchscript() file: modules/pymol/plugins/repository.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6628 unit: def __init__() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6629 unit: def __getattr__() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6630 unit: def set() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6631 unit: def get_area() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6632 unit: def get_sasa() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6633 unit: def b2vdw() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6634 unit: def interchain_distances() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6635 unit: def get_sasa_relative() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6636 unit: def ligand_zoom() file: modules/pymol/util.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6637 unit: def ready() file: modules/pymol/monitoring.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6638 unit: def cd() file: modules/pymol/externing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6639 unit: def pwd() file: modules/pymol/externing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6640 unit: def ls() file: modules/pymol/externing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6641 unit: def system() file: modules/pymol/externing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6642 unit: def fix_list() file: modules/pymol/keywords.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6643 unit: def __getitem__() file: modules/pymol/constants.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6644 unit: def safe_eval() file: modules/pymol/constants.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6645 unit: def get_event_mask() file: modules/pymol/wizard/annotation.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6646 unit: def do_scene() file: modules/pymol/wizard/annotation.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6647 unit: def do_frame() file: modules/pymol/wizard/annotation.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6648 unit: def do_state() file: modules/pymol/wizard/annotation.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6649 unit: def do_pick() file: modules/pymol/wizard/box.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6650 unit: def cleanup() file: modules/pymol/wizard/command.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6651 unit: def launch() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6652 unit: def configure() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6653 unit: def reset() file: modules/pymol/wizard/benchmark.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6654 unit: def get_event_mask() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6655 unit: def do_pick_state() file: modules/pymol/wizard/measurement.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6656 unit: def __reduce__() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 1 id: 6657 unit: def get_prompt() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6658 unit: def get_panel() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6659 unit: def get_event_mask() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6660 unit: def do_scene() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6661 unit: def do_view() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6662 unit: def do_position() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6663 unit: def do_state() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6664 unit: def do_frame() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6665 unit: def do_dirty() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6666 unit: def do_pick() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6667 unit: def do_select() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6668 unit: def do_key() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6669 unit: def do_special() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6670 unit: def cleanup() file: modules/pymol/wizard/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6671 unit: def clear() file: modules/pymol/wizard/distance.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6672 unit: def get_event_mask() file: modules/pymol/wizard/pseudoatom.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6673 unit: def get_event_mask() file: modules/pymol/wizard/mutagenesis.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6674 unit: def clear() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6675 unit: def get_event_mask() file: modules/pymol/wizard/density.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6676 unit: def get_event_mask() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6677 unit: def set_old_button_mode() file: modules/pymol/wizard/dragging.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6678 unit: def get_event_mask() file: modules/pymol/wizard/label.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6679 unit: def do_state() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6680 unit: def get_event_mask() file: modules/pymol/wizard/filter.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6681 unit: def free_all() file: modules/pymol/wizard/sculpting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6682 unit: def get_event_mask() file: modules/pymol/wizard/renaming.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6683 unit: def do_select() file: modules/pymol/wizard/fedora.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6684 unit: def launch() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6685 unit: def __init__() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6686 unit: def finish() file: modules/pymol/wizard/demo.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6687 unit: def finish() file: modules/pymol/wizard/stereodemo.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6688 unit: def undo() file: modules/pymol/wizard/appearance.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6689 unit: def __enter__() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6690 unit: def conda_ask_install() file: modules/pymol/Qt/utils.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6691 unit: def __str__() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6692 unit: def __reduce__() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 1 id: 6693 unit: def __reduce__() file: modules/pymol/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 1 id: 6694 unit: def parseFile() file: modules/pymol/headering.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6695 unit: def getColumns() file: modules/pymol/headering.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6696 unit: def getColumnsOfType() file: modules/pymol/headering.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6697 unit: def checkFile() file: modules/pymol/headering.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6698 unit: def deselect() file: modules/pymol/selecting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6699 unit: def select() file: modules/pymol/selecting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 8 id: 6700 unit: def pop() file: modules/pymol/selecting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6701 unit: def select_list() file: modules/pymol/selecting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6702 unit: def indicate() file: modules/pymol/selecting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6703 unit: def objsele_state_iter() file: modules/pymol/selecting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6704 unit: def __getattr__() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6705 unit: def _get_name() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6706 unit: def get_index_list() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6707 unit: def get_name_list() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6708 unit: def unset() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6709 unit: def unset_bond() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 8 id: 6710 unit: def get() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6711 unit: def unset_deep() file: modules/pymol/setting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6712 unit: def spheroid() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6713 unit: def mem() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6714 unit: def check() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6715 unit: def fast_minimize() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6716 unit: def minimize() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6717 unit: def dump() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6718 unit: def dummy() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6719 unit: def test() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 3 id: 6720 unit: def focal_blur() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6721 unit: def desaturate() file: modules/pymol/experimenting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6722 unit: def is_string() file: modules/pymol/checking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6723 unit: def is_list() file: modules/pymol/checking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6724 unit: def is_dict() file: modules/pymol/checking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6725 unit: def is_tuple() file: modules/pymol/checking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6726 unit: def is_sequence() file: modules/pymol/checking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6727 unit: def peak() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6728 unit: def volume_ramp_new() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6729 unit: def get_volume_color() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6730 unit: def volume_color() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6731 unit: def volume_panel() file: modules/pymol/colorramping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6732 unit: def resume() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6733 unit: def __init__() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6734 unit: def write() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6735 unit: def flush() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6736 unit: def close() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6737 unit: def log_open() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6738 unit: def log() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6739 unit: def log_close() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6740 unit: def cls() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6741 unit: def reinitialize() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6742 unit: def sync() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6743 unit: def do() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6744 unit: def quit() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6745 unit: def delete() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6746 unit: def extend() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6747 unit: def extendaa() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6748 unit: def alias() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6749 unit: def async_() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6750 unit: def reset() file: modules/pymol/cgo.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6751 unit: def new_complete_closure() file: modules/pymol/parser.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6752 unit: def cache() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6753 unit: def get_fastastr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6754 unit: def get_pdbstr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6755 unit: def get_cifstr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6756 unit: def get_xyzstr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6757 unit: def get_sdfstr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6758 unit: def get_mol2str() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6759 unit: def get_pqrstr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6760 unit: def get_maestr() file: modules/pymol/exporting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6761 unit: def __enter__() file: modules/pymol/menu.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6762 unit: def __exit__() file: modules/pymol/menu.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6763 unit: def general_color() file: modules/pymol/menu.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6764 unit: def wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6765 unit: def replace_wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6766 unit: def refresh_wizard() file: modules/pymol/wizarding.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6767 unit: def rpcPing() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6768 unit: def rpcGetNames() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6769 unit: def rpcIdAtom() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6770 unit: def rpcGetAtomCoords() file: modules/pymol/rpc.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6771 unit: def do_GET() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6772 unit: def do_POST() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6773 unit: def quit() file: modules/pymol/pymolhttpd.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6774 unit: def group() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6775 unit: def ungroup() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6776 unit: def ramp_update() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6777 unit: def set_raw_alignment() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6778 unit: def slice_new() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6779 unit: def isolevel() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6780 unit: def copy() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6781 unit: def symexp() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6782 unit: def fragment() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6783 unit: def extract() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6784 unit: def join_states() file: modules/pymol/creating.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6785 unit: def lock_c() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6786 unit: def unlock_c() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6787 unit: def lock_data() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6788 unit: def unlock_data() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6789 unit: def lock_status_attempt() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6790 unit: def lock_status() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6791 unit: def unlock_status() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6792 unit: def lock_glut() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6793 unit: def unlock_glut() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6794 unit: def __init__() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6795 unit: def __enter__() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6796 unit: def __exit__() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6797 unit: def lock_attempt() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6798 unit: def setup_global_locks() file: modules/pymol/locking.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6799 unit: def python_help() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6800 unit: def help() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6801 unit: def help_setting() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6802 unit: def commands() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6803 unit: def editing() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6804 unit: def release() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6805 unit: def edit_keys() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6806 unit: def at_sign() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6807 unit: def api() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6808 unit: def keyboard() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6809 unit: def transparency() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6810 unit: def mouse() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6811 unit: def examples() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6812 unit: def launching() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6813 unit: def movies() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6814 unit: def selections() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6815 unit: def povray() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6816 unit: def stereochemistry() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6817 unit: def text_type() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6818 unit: def faster() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6819 unit: def abort() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6820 unit: def skip() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6821 unit: def python() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6822 unit: def embed() file: modules/pymol/helping.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6823 unit: def feedback() file: modules/pymol/feedingback.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6824 unit: def tdroll() file: modules/pymol/movie.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6825 unit: def add_blank() file: modules/pymol/movie.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6826 unit: def add_roll() file: modules/pymol/movie.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6827 unit: def add_rock() file: modules/pymol/movie.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6828 unit: def has_exe() file: modules/pymol/movie.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6829 unit: def intra_fit() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6830 unit: def intra_rms() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6831 unit: def intra_rms_cur() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6832 unit: def pair_fit() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6833 unit: def __init__() file: modules/pymol/editor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6834 unit: def __enter__() file: modules/pymol/editor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6835 unit: def __exit__() file: modules/pymol/editor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6836 unit: def attach_fragment() file: modules/pymol/editor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6837 unit: def attach_amino_acid() file: modules/pymol/editor.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 8 id: 6838 unit: def get_mmtfstr() file: modules/pymol/lazyio.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6839 unit: def __call__() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6840 unit: def has_key() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6841 unit: def __getitem__() file: modules/pymol/shortcut.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6842 unit: def needle_alignment() file: modules/pymol/seqalign.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6843 unit: def match_callback() file: modules/pymol/seqalign.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 2 id: 6844 unit: def alignment_mapping() file: modules/pymol/seqalign.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6845 unit: def aln_magic_format() file: modules/pymol/seqalign.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6846 unit: def aln_magic_read() file: modules/pymol/seqalign.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6847 unit: def zoom() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6848 unit: def center() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6849 unit: def clip() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6850 unit: def origin() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6851 unit: def orient() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6852 unit: def move() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6853 unit: def enable() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6854 unit: def disable() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6855 unit: def toggle() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6856 unit: def show() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6857 unit: def show_as() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6858 unit: def hide() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6859 unit: def get_view() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6860 unit: def set_view() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6861 unit: def view() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6862 unit: def get_viewport() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6863 unit: def scene_order() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6864 unit: def stereo() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6865 unit: def turn() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6866 unit: def full_screen() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6867 unit: def rock() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6868 unit: def label() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6869 unit: def window() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6870 unit: def viewport() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6871 unit: def bg_color() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6872 unit: def cartoon() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6873 unit: def capture() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6874 unit: def draw() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6875 unit: def refresh() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6876 unit: def reset() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6877 unit: def meter_reset() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6878 unit: def load_png() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6879 unit: def rebuild() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6880 unit: def recolor() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6881 unit: def color() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6882 unit: def set_color() file: modules/pymol/viewing.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6883 unit: def get_volume_field() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6884 unit: def get_volume_histogram() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6885 unit: def get_object_matrix() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6886 unit: def get_object_ttt() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6887 unit: def get_object_settings() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6888 unit: def get_object_list() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6889 unit: def get_symmetry() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6890 unit: def get_title() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6891 unit: def get_povray() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6892 unit: def get_idtf() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6893 unit: def get_mtl_obj() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6894 unit: def get_version() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6895 unit: def get_vrml() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6896 unit: def get_collada() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6897 unit: def count_states() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6898 unit: def get_movie_length() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6899 unit: def count_frames() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6900 unit: def export_dots() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6901 unit: def overlap() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6902 unit: def get_renderer() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6903 unit: def get_atom_coords() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6904 unit: def get_coords() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6905 unit: def get_coordset() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6906 unit: def get_position() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6907 unit: def get_distance() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 5 id: 6908 unit: def get_angle() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6909 unit: def get_dihedral() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 7 id: 6910 unit: def get_model() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6911 unit: def get_bonds() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6912 unit: def get_area() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6913 unit: def get_chains() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6914 unit: def get_names() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6915 unit: def get_type() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6916 unit: def id_atom() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6917 unit: def identify() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6918 unit: def index() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6919 unit: def find_pairs() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 8 id: 6920 unit: def get_extent() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6921 unit: def phi_psi() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6922 unit: def count_atoms() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6923 unit: def count_discrete() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6924 unit: def get_names_of_type() file: modules/pymol/querying.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6925 unit: def set_sel() file: modules/pymol/keyboard.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6926 unit: def idle() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6927 unit: def getRedisplay() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6928 unit: def reshape() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6929 unit: def draw() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6930 unit: def button() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 6 id: 6931 unit: def drag() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6932 unit: def __exit__() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6933 unit: def __getattr__() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6934 unit: def stop() file: modules/pymol2/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6935 unit: def toList() file: modules/chempy/cc1.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6936 unit: def get() file: modules/chempy/fragments/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6937 unit: def nAtom() file: modules/chempy/models.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6938 unit: def nBond() file: modules/chempy/models.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6939 unit: def __init__() file: modules/chempy/models.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6940 unit: def __init__() file: modules/chempy/models.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6941 unit: def push_tok() file: modules/chempy/mae.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6942 unit: def __init__() file: modules/chempy/fast/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6943 unit: def __reduce__() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 1 id: 6944 unit: def resi() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6945 unit: def get_implicit_valence() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6946 unit: def has() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6947 unit: def __gt__() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6948 unit: def __eq__() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6949 unit: def has() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6950 unit: def has() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6951 unit: def updateFromList() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6952 unit: def fromList() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6953 unit: def toList() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6954 unit: def __init__() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6955 unit: def write() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6956 unit: def close() file: modules/chempy/__init__.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6957 unit: def assign_types() file: modules/chempy/protein.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6958 unit: def add_bonds() file: modules/chempy/protein.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6959 unit: def set_single() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6960 unit: def get_model() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6961 unit: def set_model() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6962 unit: def close() file: modules/chempy/sdf.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6963 unit: def get_null() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6964 unit: def get_identity() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 6965 unit: def length() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6966 unit: def add() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6967 unit: def average() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6968 unit: def scale() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6969 unit: def negate() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6970 unit: def sub() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6971 unit: def dot_product() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6972 unit: def transform_about_point() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6973 unit: def reverse() file: modules/chempy/cpv.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6974 unit: def fromString() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6975 unit: def toString() file: modules/chempy/pkl.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6976 unit: def __iter__() file: modules/chempy/cif.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6977 unit: def to_float() file: modules/chempy/cif.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6978 unit: def to_str() file: modules/chempy/cif.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6979 unit: def index_to_int() file: modules/chempy/cif.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6980 unit: def index_to_float() file: modules/chempy/cif.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6981 unit: def index_to_str() file: modules/chempy/cif.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6982 unit: def load_model() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6983 unit: def get_guess_group() file: modules/chempy/gamess1.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6984 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6985 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6986 unit: def __init__() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6987 unit: def __init__() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6988 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6989 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6990 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 2 number of parameters: 1 id: 6991 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 3 number of parameters: 1 id: 6992 unit: def decode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6993 unit: def encode() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 6994 unit: def get_iter() file: modules/chempy/mmtf/io.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6995 unit: def __init__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6996 unit: def __init__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 6997 unit: def MakeBond() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 4 id: 6998 unit: def SetHcount() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 6999 unit: def SetFormalCharge() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 7000 unit: def SetAtomicMass() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 7001 unit: def __str__() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7002 unit: def addProp() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 7003 unit: def properties() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7004 unit: def addChild() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 7005 unit: def children() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7006 unit: def selectChildren() file: modules/chempy/cex.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 7007 unit: def __init__() file: modules/chempy/brick.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7008 unit: def shutdown() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7009 unit: def standby() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7010 unit: def purge() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7011 unit: def reset() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7012 unit: def keys() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7013 unit: def has_key() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 7014 unit: def get_info() file: modules/chempy/dictdb.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7015 unit: def updateLineEdit() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7016 unit: def updateSetting() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 7017 unit: def setDoubleValue() file: data/startup/lightingsettings_gui/main.py start line: 0 end line: 0 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 7018 unit: inline uchar CLIP_COLOR_VALUE() file: layer1/CGO.h start line: 49 end line: 49 size: 1 LOC McCabe index: 3 number of parameters: 1 id: 7019 unit: inline float CONVERT_COLOR_VALUE() file: layer1/CGO.h start line: 50 end line: 50 size: 1 LOC McCabe index: 3 number of parameters: 1 id: 7020 unit: static size_t fsizeof() file: layer1/CGO.h start line: 274 end line: 274 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7021 unit: void set_data() file: layer1/CGO.h start line: 283 end line: 283 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7022 unit: virtual ~op_with_data() file: layer1/CGO.h start line: 287 end line: 287 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7023 unit: int get_data_length() file: layer1/CGO.h start line: 310 end line: 310 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7024 unit: int get_data_length() file: layer1/CGO.h start line: 342 end line: 342 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7025 unit: int get_data_length() file: layer1/CGO.h start line: 356 end line: 356 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7026 unit: int get_data_length() file: layer1/CGO.h start line: 372 end line: 372 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7027 unit: int get_data_length() file: layer1/CGO.h start line: 380 end line: 380 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7028 unit: int get_data_length() file: layer1/CGO.h start line: 412 end line: 412 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7029 unit: int get_data_length() file: layer1/CGO.h start line: 444 end line: 444 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7030 unit: int get_data_length() file: layer1/CGO.h start line: 528 end line: 528 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7031 unit: operator int() file: layer1/CGO.h start line: 675 end line: 675 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7032 unit: const_iterator begin() file: layer1/CGO.h start line: 703 end line: 703 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7033 unit: iterator begin() file: layer1/CGO.h start line: 704 end line: 704 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7034 unit: virtual void draw() file: layer1/ScrollBar.h start line: 55 end line: 55 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7035 unit: virtual void reshape() file: layer1/ScrollBar.h start line: 56 end line: 56 size: 1 LOC McCabe index: 1 number of parameters: 2 id: 7036 unit: void maxOut() file: layer1/ScrollBar.h start line: 58 end line: 58 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7037 unit: void setValueNoCheck() file: layer1/ScrollBar.h start line: 61 end line: 61 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7038 unit: void setValue() file: layer1/ScrollBar.h start line: 62 end line: 62 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7039 unit: void drawNoFill() file: layer1/ScrollBar.h start line: 63 end line: 63 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7040 unit: int grabbed() file: layer1/ScrollBar.h start line: 64 end line: 64 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7041 unit: float getValue() file: layer1/ScrollBar.h start line: 65 end line: 65 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7042 unit: void moveBy() file: layer1/ScrollBar.h start line: 67 end line: 67 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7043 unit: template inline int SettingGetType() file: layer1/Setting.h start line: 195 end line: 195 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7044 unit: template inline int SettingGetType() file: layer1/Setting.h start line: 196 end line: 196 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7045 unit: template inline int SettingGetType() file: layer1/Setting.h start line: 197 end line: 197 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7046 unit: template inline int SettingGetType() file: layer1/Setting.h start line: 198 end line: 198 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7047 unit: template inline int SettingGetType() file: layer1/Setting.h start line: 199 end line: 199 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7048 unit: template inline int SettingGetType() file: layer1/Setting.h start line: 200 end line: 200 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7049 unit: template inline int SettingGetType() file: layer1/Setting.h start line: 201 end line: 201 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7050 unit: inline void SettingSet() file: layer1/Setting.h start line: 318 end line: 318 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7051 unit: inline void SettingSet() file: layer1/Setting.h start line: 319 end line: 319 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7052 unit: inline void SettingSet() file: layer1/Setting.h start line: 320 end line: 320 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7053 unit: inline void SettingSet() file: layer1/Setting.h start line: 321 end line: 321 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7054 unit: inline void SettingSet() file: layer1/Setting.h start line: 322 end line: 322 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7055 unit: inline void SettingSet() file: layer1/Setting.h start line: 323 end line: 323 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7056 unit: void swap() file: layer0/vla.h start line: 32 end line: 32 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7057 unit: explicit vla() file: layer0/vla.h start line: 39 end line: 39 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7058 unit: explicit vla() file: layer0/vla.h start line: 42 end line: 42 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7059 unit: explicit operator bool() file: layer0/vla.h start line: 105 end line: 105 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7060 unit: bool IsConfigured() file: layer0/ShaderMgr.h start line: 339 end line: 339 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7061 unit: template void destroy_at() file: layer0/LangUtil.h start line: 27 end line: 27 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7062 unit: void rbo::unbind() file: layer0/GenericBuffer.cpp start line: 13 end line: 13 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7063 unit: void renderBuffer_t::freeBuffer() file: layer0/GenericBuffer.cpp start line: 24 end line: 24 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7064 unit: void renderBuffer_t::bind() file: layer0/GenericBuffer.cpp start line: 26 end line: 26 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7065 unit: void renderBuffer_t::unbind() file: layer0/GenericBuffer.cpp start line: 28 end line: 28 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7066 unit: template static int tex_tab() file: layer0/GenericBuffer.cpp start line: 166 end line: 166 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7067 unit: void textureBuffer_t::freeBuffer() file: layer0/GenericBuffer.cpp start line: 194 end line: 194 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7068 unit: void textureBuffer_t::bind() file: layer0/GenericBuffer.cpp start line: 278 end line: 278 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7069 unit: void textureBuffer_t::unbind() file: layer0/GenericBuffer.cpp start line: 280 end line: 280 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7070 unit: template static int fbo_tab() file: layer0/GenericBuffer.cpp start line: 298 end line: 298 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7071 unit: void fbo::unbind() file: layer0/GenericBuffer.cpp start line: 300 end line: 300 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7072 unit: void frameBuffer_t::genBuffer() file: layer0/GenericBuffer.cpp start line: 302 end line: 302 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7073 unit: void frameBuffer_t::freeBuffer() file: layer0/GenericBuffer.cpp start line: 304 end line: 304 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7074 unit: inline int DIP2PIXEL() file: layer0/PyMOLGlobals.h start line: 23 end line: 23 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7075 unit: inline float DIP2PIXEL() file: layer0/PyMOLGlobals.h start line: 24 end line: 24 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7076 unit: virtual ~gpuBuffer_t() file: layer0/GenericBuffer.h start line: 176 end line: 176 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7077 unit: virtual size_t get_hash_id() file: layer0/GenericBuffer.h start line: 177 end line: 177 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7078 unit: virtual void set_hash_id() file: layer0/GenericBuffer.h start line: 180 end line: 180 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7079 unit: void bind() file: layer0/GenericBuffer.h start line: 757 end line: 757 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7080 unit: virtual void draw() file: layer0/Block.h start line: 39 end line: 39 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7081 unit: virtual bool fastDraw() file: layer0/Block.h start line: 40 end line: 40 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7082 unit: virtual int click() file: layer0/Block.h start line: 42 end line: 42 size: 1 LOC McCabe index: 1 number of parameters: 4 id: 7083 unit: virtual int cursor() file: layer0/Block.h start line: 43 end line: 43 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7084 unit: virtual int drag() file: layer0/Block.h start line: 44 end line: 44 size: 1 LOC McCabe index: 1 number of parameters: 3 id: 7085 unit: virtual int release() file: layer0/Block.h start line: 45 end line: 45 size: 1 LOC McCabe index: 1 number of parameters: 4 id: 7086 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp start line: 332 end line: 332 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7087 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp start line: 383 end line: 383 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7088 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp start line: 264 end line: 264 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7089 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp start line: 420 end line: 420 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7090 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp start line: 335 end line: 335 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7091 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp start line: 318 end line: 318 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7092 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp start line: 192 end line: 192 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7093 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp start line: 522 end line: 522 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7094 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp start line: 448 end line: 448 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7095 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp start line: 151 end line: 151 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7096 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp start line: 238 end line: 238 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7097 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp start line: 711 end line: 711 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7098 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp start line: 332 end line: 332 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7099 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp start line: 490 end line: 490 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7100 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp start line: 523 end line: 523 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7101 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp start line: 340 end line: 340 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7102 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp start line: 319 end line: 319 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7103 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp start line: 191 end line: 191 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7104 unit: uint32_t framesperfile() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 131 end line: 131 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7105 unit: bool is_compact() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 133 end line: 133 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7106 unit: size_t size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 135 end line: 135 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7107 unit: size_t full_size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 136 end line: 136 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7108 unit: void truncate() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 138 end line: 138 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7109 unit: void restore_full_size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 140 end line: 140 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7110 unit: virtual ~FrameSetReader() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 162 end line: 162 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7111 unit: bool has_velocities() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 164 end line: 164 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7112 unit: bool eof() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 215 end line: 215 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7113 unit: ssize_t curframe() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 256 end line: 256 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7114 unit: uint32_t framesperfile() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 258 end line: 258 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7115 unit: virtual ssize_t size() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 261 end line: 261 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7116 unit: virtual ssize_t nframesets() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 270 end line: 270 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7117 unit: virtual ssize_t nframesets() file: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx start line: 330 end line: 330 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7118 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp start line: 256 end line: 256 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7119 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp start line: 578 end line: 578 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7120 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp start line: 509 end line: 509 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7121 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp start line: 306 end line: 306 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7122 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp start line: 320 end line: 320 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7123 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp start line: 265 end line: 265 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7124 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp start line: 934 end line: 934 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7125 unit: int ReadPARM::get_parm_natoms() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 940 end line: 940 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7126 unit: int ReadPARM::get_parm_nbonds() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 942 end line: 942 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7127 unit: int ReadPARM::get_parm_boxInfo() file: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h start line: 944 end line: 944 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7128 unit: int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp start line: 605 end line: 605 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7129 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp start line: 229 end line: 229 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7130 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp start line: 275 end line: 275 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7131 unit: inline char peek() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 134 end line: 134 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7132 unit: virtual ~Array() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 776 end line: 776 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7133 unit: virtual void set_schema() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 778 end line: 778 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7134 unit: virtual void insert_row() file: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp start line: 779 end line: 779 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7135 unit: VMDPLUGIN_API int VMDPLUGIN_fini() file: contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp start line: 350 end line: 350 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7136 unit: bool has_anisou() file: layer2/AtomInfo.h start line: 358 end line: 358 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7137 unit: signed char getCCIn() file: layer2/RepCartoon.cpp start line: 45 end line: 45 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7138 unit: signed char getCCOut() file: layer2/RepCartoon.cpp start line: 46 end line: 46 size: 1 LOC McCabe index: 2 number of parameters: 0 id: 7139 unit: void setCCOut() file: layer2/RepCartoon.cpp start line: 48 end line: 48 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7140 unit: operator int() file: layer2/RepCartoon.cpp start line: 52 end line: 52 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7141 unit: bool has_anisou() file: layer2/AtomInfoHistory.h start line: 89 end line: 89 size: 1 LOC McCabe index: 6 number of parameters: 0 id: 7142 unit: bool has_anisou() file: layer2/AtomInfoHistory.h start line: 165 end line: 165 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7143 unit: char getInscode() file: layer2/AtomInfoHistory.h start line: 238 end line: 238 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7144 unit: void setInscode() file: layer2/AtomInfoHistory.h start line: 239 end line: 239 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7145 unit: bool has_anisou() file: layer2/AtomInfoHistory.h start line: 251 end line: 251 size: 1 LOC McCabe index: 6 number of parameters: 0 id: 7146 unit: template inline float get_anisou_factor() file: layer2/AtomInfoHistory.cpp start line: 14 end line: 14 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7147 unit: template inline float get_anisou_factor() file: layer2/AtomInfoHistory.cpp start line: 15 end line: 15 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7148 unit: template std::string cif_array::as() file: layer2/CifFile.cpp start line: 159 end line: 159 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7149 unit: template int cif_array::as() file: layer2/CifFile.cpp start line: 160 end line: 160 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7150 unit: template double cif_array::as() file: layer2/CifFile.cpp start line: 161 end line: 161 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7151 unit: template float cif_array::as() file: layer2/CifFile.cpp start line: 162 end line: 162 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7152 unit: static int decoy_input_hook() file: layer5/main.cpp start line: 1661 end line: 1661 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7153 unit: int getAtomCount() file: layer3/Selector.h start line: 219 end line: 219 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7154 unit: virtual ~AbstractAtomIterator() file: layer3/AtomIterators.h start line: 28 end line: 28 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7155 unit: virtual void beginMolecule() file: layer3/MoleculeExporter.cpp start line: 253 end line: 253 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7156 unit: virtual void beginFile() file: layer3/MoleculeExporter.cpp start line: 254 end line: 254 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7157 unit: void writeAtom() file: layer3/MoleculeExporter.cpp start line: 1482 end line: 1482 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7158 unit: inline int Fortran_Array3D::dim1() file: modules/cealign/src/tnt/tnt_fortran_array3d.h start line: 198 end line: 198 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7159 unit: inline int Fortran_Array3D::dim2() file: modules/cealign/src/tnt/tnt_fortran_array3d.h start line: 201 end line: 201 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7160 unit: inline int Fortran_Array3D::dim3() file: modules/cealign/src/tnt/tnt_fortran_array3d.h start line: 204 end line: 204 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7161 unit: inline int Array1D::dim1() file: modules/cealign/src/tnt/tnt_array1d.h start line: 241 end line: 241 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7162 unit: inline int Array1D::dim() file: modules/cealign/src/tnt/tnt_array1d.h start line: 244 end line: 244 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7163 unit: inline int Fortran_Array2D::dim1() file: modules/cealign/src/tnt/tnt_fortran_array2d.h start line: 186 end line: 186 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7164 unit: inline int Fortran_Array2D::dim2() file: modules/cealign/src/tnt/tnt_fortran_array2d.h start line: 189 end line: 189 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7165 unit: inline int Fortran_Array2D::ref_count() file: modules/cealign/src/tnt/tnt_fortran_array2d.h start line: 198 end line: 198 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7166 unit: Integer index() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 50 end line: 50 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7167 unit: const_iterator begin() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 98 end line: 98 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7168 unit: const_iterator end() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 99 end line: 99 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7169 unit: inline Subscript index() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 102 end line: 102 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7170 unit: inline int dim() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 161 end line: 161 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7171 unit: int num_nonzeros() file: modules/cealign/src/tnt/tnt_sparse_vector.h start line: 162 end line: 162 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7172 unit: Subscript lbound() file: modules/cealign/src/tnt/tnt_matrix.h start line: 178 end line: 178 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7173 unit: Subscript size() file: modules/cealign/src/tnt/tnt_matrix.h start line: 190 end line: 190 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7174 unit: Subscript num_rows() file: modules/cealign/src/tnt/tnt_matrix.h start line: 337 end line: 337 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7175 unit: Subscript num_cols() file: modules/cealign/src/tnt/tnt_matrix.h start line: 338 end line: 338 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7176 unit: Integer row_index() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 54 end line: 54 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7177 unit: Integer col_index() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 55 end line: 55 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7178 unit: int is_closed() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 126 end line: 126 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7179 unit: inline int num_rows() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 174 end line: 174 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7180 unit: inline int num_cols() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 175 end line: 175 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7181 unit: inline int num_columns() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 176 end line: 176 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7182 unit: int num_nonzeros() file: modules/cealign/src/tnt/tnt_sparse_matrix.h start line: 177 end line: 177 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7183 unit: inline Stopwatch::Stopwatch() file: modules/cealign/src/tnt/tnt_stopwatch.h start line: 53 end line: 53 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7184 unit: inline int ref_count() file: modules/cealign/src/tnt/tnt_array3d.h start line: 77 end line: 77 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7185 unit: inline int Array3D::dim1() file: modules/cealign/src/tnt/tnt_array3d.h start line: 233 end line: 233 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7186 unit: inline int Array3D::dim2() file: modules/cealign/src/tnt/tnt_array3d.h start line: 236 end line: 236 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7187 unit: inline int Array3D::dim3() file: modules/cealign/src/tnt/tnt_array3d.h start line: 239 end line: 239 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7188 unit: inline int Fortran_Array1D::dim1() file: modules/cealign/src/tnt/tnt_fortran_array1d.h start line: 201 end line: 201 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7189 unit: inline int Fortran_Array1D::dim() file: modules/cealign/src/tnt/tnt_fortran_array1d.h start line: 204 end line: 204 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7190 unit: Subscript lbound() file: modules/cealign/src/tnt/tnt_vector.h start line: 63 end line: 63 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7191 unit: iterator begin() file: modules/cealign/src/tnt/tnt_vector.h start line: 157 end line: 157 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7192 unit: iterator end() file: modules/cealign/src/tnt/tnt_vector.h start line: 158 end line: 158 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7193 unit: const iterator begin() file: modules/cealign/src/tnt/tnt_vector.h start line: 159 end line: 159 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7194 unit: const iterator end() file: modules/cealign/src/tnt/tnt_vector.h start line: 160 end line: 160 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7195 unit: inline int Array2D::dim1() file: modules/cealign/src/tnt/tnt_array2d.h start line: 367 end line: 367 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7196 unit: inline int Array2D::dim2() file: modules/cealign/src/tnt/tnt_array2d.h start line: 370 end line: 370 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 7197 unit: def __init__() file: modules/pmg_tk/Setting.py start line: 0 end line: 0 size: 1 LOC McCabe index: 1 number of parameters: 4 id: 7198 unit: def color_blue() file: modules/pymol/controlling.py start line: 0 end line: 0 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7199 unit: def foo() file: modules/pymol/commanding.py start line: 0 end line: 0 size: 1 LOC McCabe index: 1 number of parameters: 1 id: 7200 unit: def fit() file: modules/pymol/fitting.py start line: 0 end line: 0 size: 1 LOC McCabe index: 1 number of parameters: 0