modules/chempy/water_amber.py (8 lines of code) (raw):

#A* ------------------------------------------------------------------- #B* This file contains source code for the PyMOL computer program #C* copyright 1998-2000 by Warren Lyford Delano of DeLano Scientific. #D* ------------------------------------------------------------------- #E* It is unlawful to modify or remove this copyright notice. #F* ------------------------------------------------------------------- #G* Please see the accompanying LICENSE file for further information. #H* ------------------------------------------------------------------- #I* Additional authors of this source file include: #-* #-* #-* #Z* ------------------------------------------------------------------- normal = { ('HOH' , 'O' ) : { 'type' : 'OW' , 'charge' : -0.8340 } , ('HOH' , 'H2' ) : { 'type' : 'HW' , 'charge' : 0.4170 } , ('HOH' , 'H1' ) : { 'type' : 'HW' , 'charge' : 0.4170 } , ('WAT' , 'O' ) : { 'type' : 'OW' , 'charge' : -0.8340 } , ('WAT' , 'H2' ) : { 'type' : 'HW' , 'charge' : 0.4170 } , ('WAT' , 'H1' ) : { 'type' : 'HW' , 'charge' : 0.4170 } , }